EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF01074 - Glyco_hydro_38)
Glycosyl hydrolases family 38 N-terminal domain
(Pfam reference: accession no. PF01074)
(Interpro reference: accession no. IPR000602)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
52 sequences @ 403 aa
(ave. pairwise identity: 0.28)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 26.18)
nucleotides
(available for above)
51 sequences @ 1209 bp
(ave. pairwise identity: 0.41)
New Hampshire format
(total tree length: 20.68)
amino acids, restricted set
(corresp. to available nt seqs)
51 sequences @ 403 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 25.94)