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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF01041 phylogeny
for amino acid alignment


 
((((((O31009_VIBAN/11-363,P72893_SYNY3/11-365),(O07849_ECOLI/11-360,Q06953_VIBCH/7-361)),O26434_METTH/7-359),((O34228_VIBCH/10-390,Q46721_ECOLI/10-388),(((Q05341_YERPS/40-430,Q57174_YERPS/40-430),RFBH_SALTY/40-430),O31006_VIBAN/40-430))),((((P77952_STRGR/22-413,(P72454_STRGR/13-401,Q53741_9ACTO/27-411)),((Q44131_ACTPA/16-381,(Q44095_AMYMD/14-381,Q53911_STRCU/16-380)),MOSB_RHIME/108-496)),P72452_STRGR/11-373),(O33942_SACER/27-380,Y3402_MYCTU/44-405))),((P73264_SYNY3/14-373,Q45985_CAUCR/11-382),((Q54371_STRLN/10-374,Q45381_BORPE/10-390),(YFBE_ECOLI/10-374,(O25130_HELPY/9-366,(Y1066_METJA/12-379,SPSC_BACSU/14-382))))),((O07566_BACSU/78-432,(((DEGT_BACST/13-365,P74668_SYNY3/13-379),Q45378_BORPE/11-362),(DNRJ_STRPE/13-364,(O31015_VIBAN/12-367,(ERBS_SACER/13-362,Q54142_STRFR/23-377))))),O27256_METTH/7-356));
((((((O31009_VIBAN/11-363:0.45547,P72893_SYNY3/11-365:0.44829):0.23302,(O07849_ECOLI/11-360:0.25742,Q06953_VIBCH/7-361:0.36067):0.23155):0.03904,O26434_METTH/7-359:0.41891):0.13959,((O34228_VIBCH/10-390:0.13120,Q46721_ECOLI/10-388:0.18347):0.68529,(((Q05341_YERPS/40-430:0.00000,Q57174_YERPS/40-430:0.00533):0.05609,RFBH_SALTY/40-430:0.06358):0.04126,O31006_VIBAN/40-430:0.10589):0.56798):0.51566):0.16866,((((P77952_STRGR/22-413:0.67635,(P72454_STRGR/13-401:0.94193,Q53741_9ACTO/27-411:0.84945):0.18598):0.08680,((Q44131_ACTPA/16-381:0.11734,(Q44095_AMYMD/14-381:0.20886,Q53911_STRCU/16-380:0.15527):0.09394):0.64909,MOSB_RHIME/108-496:1.09210):0.27747):0.20055,P72452_STRGR/11-373:0.66414):0.02827,(O33942_SACER/27-380:0.67957,Y3402_MYCTU/44-405:1.14423):0.27813):0.14096):0.06141,((P73264_SYNY3/14-373:1.21373,Q45985_CAUCR/11-382:0.52523):0.17980,((Q54371_STRLN/10-374:0.66896,Q45381_BORPE/10-390:0.41315):0.11786,(YFBE_ECOLI/10-374:0.56169,(O25130_HELPY/9-366:0.98841,(Y1066_METJA/12-379:0.33360,SPSC_BACSU/14-382:0.27748):0.08428):0.09792):0.00000):0.15466):0.08157,((O07566_BACSU/78-432:0.82647,(((DEGT_BACST/13-365:0.33730,P74668_SYNY3/13-379:0.40592):0.10832,Q45378_BORPE/11-362:0.55362):0.08547,(DNRJ_STRPE/13-364:0.59449,(O31015_VIBAN/12-367:0.45958,(ERBS_SACER/13-362:0.24109,Q54142_STRFR/23-377:0.31380):0.21067):0.13401):0.11984):0.07541):0.13522,O27256_METTH/7-356:0.42679):0.04354);