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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00995 - Sec1)
Sec1 family
(Pfam reference: accession no. PF00995)
(Interpro reference: accession no. IPR001619)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
17 sequences @ 735 aa
(ave. pairwise identity: 0.24)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 13.65)
nucleotides
(available for above)
16 sequences @ 2205 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 8.98)
amino acids, restricted set
(corresp. to available nt seqs)
16 sequences @ 735 aa
(ave. pairwise identity: 0.24)
New Hampshire format
(total tree length: 13.11)