EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00984 alignment
(27 sequences with 300 bp)


Y428_METJA/202-293 GCTAAAACAGCAGAGATGGTTAAGTTAATGGAAAATACTTATAGAGATGTTAATATTGCCTTAGCCAACGAATTTGCAAAAATTGCAGAGGAAATTGGCATTAATGTTTGGGAAGCAATAGAATTAGCCAATAAACATCCAAGAGTAAAT---...------ATTTTAAAGCCAGGGCCAGGAGTAGGTGGGCATTGTATAAGCATAGACCCGTGGTTTATTGTTGAGAAATCA------------AAGAACGCTAAATTAATAAGAACTGCAAGAGAGTTAAACGACTCTATGCCATTA
O26924_METTH/203-298 CTCATGACAGCCGAGATGGTTAAACTGATGGAGAACACCTACAGGGACACCAACATAGCCCTTGCCAATGAGCTTGCGGTTATATGTGAGGCCCTTGGCATAGACGCCATAAACGCCATCGAGGCAGCAAACCACCATCCGAGGGTGAAC---...------ATACACACACCGGGTCCGGGTGTTGGCGGCCACTGCCTCTCAATAGACCCCTACTTCATAGTGGAGATGGCGGAGAGGAAGGGCGTGCCTGCAAGGCTAATAAGGACGGCCAGGGAGGTAAATGAGTCCATGCCCCTG
P72381_STAAU/197-289 GCACGTACTGCTGAAATGAGTAAGCTAATGGAAAACACATATAGAGACGTGAATATTGCTTTAGCTAATGAATTAACAAAAATTTGCAATAACTTAAATATTAATGTATTAGTTGTGATTGAAATGGCAAACAAACATCCGCGTGTTAAT---...------ATCCATCAACCTGGTCCAGGAGTAGGCGGTCATTGTTTAGCTGTTGATCCGTACTTTATTATTGCTAAAGACCCT---------GAAAATGCAAAGTTAATTCAAACTGGACGTGAAATTAATAATTCAATGCCGGCC
EPSD2_RALSO/211-303 GCGCGCACGGCCGAGATGTGCAAGCTGACGGAGAACGCTTTCCGCGACGTCAACATTGCGTTCGCCAATGAGCTGTCGATGATCTGCGATGAAATCGGCGTCAACGTGTGGGAGCTGATCAGCGTGGCGAACCGCCATCCGCGGGTCAAC---...------ATCCTGCAGCCGGGGCCCGGCGTGGGCGGGCATTGCATCGCCGTCGATCCCTGGTTCATCGTCGATGCGGCACCC---------GAGAGCGCGCGCCTGATCCGCACCGCGCGCGAGGTCAACGATGCCAAGCCGCAC
WECC_ECOLI/205-297 TCGCGGACGGCGGAAATGTGTAAGCTCACCGAAAACAGCTTCCGCGATGTGAATATCGCTTTTGCTAATGAATTGTCGCTGATTTGTGCCGATCAGGGGATTAACGTCTGGGAACTGATTCGCCTGGCGAATCGTCACCCTCGCGTTAAT---...------ATTCTTCAGCCTGGCCCTGGCGTGGGCGGTCACTGCATTGCTGTTGATCCGTGGTTTATCGTGGCACAGAACCCC---------CAGCAGGCGCGGCTTATCCGTACCGCGCGCGAAGTGAACGATCACAAACCGTTC
VIPA_SALTI/201-295 ATCAAAGTTGCTGAGGCAGCGAAGGTGATTGAAAATACGCAACGCGATCTGAATATTGCCTTGGTCAATGAGCTGGCGATTATTTTTAATCGTTTAAATATCGATACTGAAGCCGTGCTACGTGCCGCTGGCAGCAAATGGAATTTCCTG---...------CCATTCCGTCCGGGA---CTGGTCGGTGGTCACTGTATTGGCGTAGATCCCTATTATCTGACACATAAATCTCAGGGCATTGGCTATTATCCAGAAATCATACTTGCAGGACGCCGCCTGAACGACAACATGGGCAAC
CAPL_STAAU/196-290 ATTAAAGTAGCAGAAGCAGCAAAAGTCATTGAAAACACACAACGTGATGTAAATATTGCCCTAATGAATGAATTGGCAATTATTTTTGATAAATTAGATATAGATACTAACGAGGTATTAAAAGCTTCAGGAACAAAATGGAACTTCTTG---...------AATTTTAAACCAGGA---TTAGTAGGGGGACATTGCATTGGTGTGGACCCATATTATTTAACACATAAAGCTCAGGAAGTTGGGCACCATCCTGAAGTGATTTTAGCAGGTAGAAGAATAAATGATAATATGGCTAAA
Q55042_SHISO/202-295 ATAAAAGTAGAGAGGCTGCAAAGTAATGTAAAC---ACGCAGCGAGATGTCAATATTGCATTGATTAATGAGTTATCTATTATATTTAATAAGTTAGGGATTGATACCTTAGAGGTTCTTGAGGCTGCAGGTACGAAGTGGAATCTTTTA---...------CCTTTTAGGCCCGGT---TTAGTAGGTGGCCACTGTATAGGTGTAGATCCTTATTATCTTACACATAAAGCGCAAAGTGTCGGCTATCATCCGGAGATGATTTTAGCCGGACGTCGTTTAAATGATAGTATGGGGCAG
P72132_PSEAE/211-307 ACCAAGGCCGCCGAGATGACCAAGCTGTTGGAGAACATTCATCGCGCGGTCAATATCGGTCTGGTCAACGAAATGAAGATCGTTGCTGATCGCATGGGTATCGACATCTTTGAAGTGGTTGATGCTGCGGCGACCAAGCCGTTCGGTTTC---...---ACTCCTTACTACCCAGGGCCGGGACTGGGCGGGCACTGTATCCCGATCGATCCCTTCTACCTGACTTGGAAGGCTCGCGAATACGGACTGCATACCCGCTTCATCGAACTGTCTGGTGAGGTCAACCAGGCCATGCCGGAA
UGDH_SOYBN/209-306 CTTTGGTCGGCAGAACTGTCTAAGCTTGCTGCTAATGCCTTCTTAGCACAAAGGATTTCATCTGTCAATGCCATGTCAGCACTTTGTGAGGCTACTGGGGCAAACGTTCAACAGGTGTCCTATTCTGTTGGTACAGACTCAAGGATTGGA---...CCCAAGTTTCTCAATGCCAGTGTTGGTTTTGGTGGATCCTGCTTCCAGAAGGATATCTTGAACCTTGTTTACATCTGTGAGTGCAATGGCCTTCCAGAGGTGGCTGAGTATTGGAAACAAGTGATCAAGATCAATGATTATCAG
UGDH_CAEEL/220-317 ACATGGAGCAGCGAACTTTCGAAACTCGTTGCCAACGCATTCTTGGCTCAAAGAATTTCATCGATCAATTCAATTTCTGCCGTTTGCGAAGCTACCGGAGCTGAAATCTCGGAAGTTGCTCACGCAGTTGGATATGACACTCGAATTGGT---...AGCAAGTTCCTACAAGCATCTGTTGGCTTTGGAGGGAGCTGCTTCCAAAAAGATGTACTCTCACTTGTATATCTTTGCGAATCTCTCAATCTTCCACAAGTCGCTGATTATTGGCAAGGAGTGATTAATATTAACAACTGGCAA
UGDH_DROME/209-306 ACGTGGAGCAGCGAGCTGTCTAAGCTGGCGGCCAACGCATTCCTCGCCCAGCGAATCTCCAGCATTAATTCGCTGTCGGCAGTGTGCGAGGCCACGGGCGCAGATGTTTCCGAGGTGGCGAGGGCCGTGGGTCTAGACTCTCGCATCGGT---...TCCAAGTTCCTGCAGGCGTCGGTGGGCTTCGGCGGCAGTTGCTTTCAGAAGGACATCCTCAATCTGATCTACATCTGCGAGAACCTCAATCTGCCCGAGGTGGCCGCCTACTGGCAGCAGGTGATCGACATGAATGAGTACCAG
Y1054_METJA/198-295 TGGGAGACTGCAGAGTTAATAAAATATGCCTCTAACGCTTTCTTAGCAACAAAGATATCTTTTATAAATGAGTTGGCAAAATTATCGGATAAAGTTAAAGCTGATATAAAAACAATAAGCTATGCTATGGGTTTAGATCCAAGAATTGGG---...AATAAGTTTTTAAATGCTGGGATTGGTTATGGTGGGAGCTGTTTCCACCCAGATGAAGTTTTATTTATAGATAGAGGTAGAGGTTTAGAATGCATAACATTCAAAGAATTATTTGAATTAGAAGATAAAGATAATGTAAAGATT
P96718_BACSU/197-292 ATCAGAAGCGCCGAGATGATCAAATATGCCTCAAATGCTTTTCTGGCCACTAAGATCAGTTTTATAAACGAAATTTCGAATATATGTGAAAAGGTCGGCGCCGATATTGAAGCAGTCGCATACGGGATGGGACAGGATAAGCGGATCGGG---...AGCCAGTTTTTAAAAGCGGGCATAGGCTACGGCGGCTCTTGTTTTCCAAAGGACACAAACGCCCTCGTGCAAATTGCCGGCAATGTCGAGCATGATTTTGAA------CTGCTGAAATCCGTTATCAAAGTCAACAACAATCAG
P72834_SYNY3/219-314 CTTAGTTCGGCGGAAATGATTAAGTATGCGGCCAATGCTTTTTTGGCTACCAAAATTAGTTTTATTAACGAGGTGGCCAATATCTGTGACCGGGTAGGGGCGGATGTGACCCAGGTGGCCCAGGGCATTGGCTTGGATTCCCGTATCGGT---...AGTAAATTTCTTAATGCGGGCATTGGTTGGGGAGGTTCCTGTTTTCCGAAGGATGTGTCTGCGTTGATCCACACTGCGAAGGACTATGGTTACACCACTTCA------ATTTTGAATGCCGTAGTGGAGGTAAACCAGGTACAA
TUAD_BACSU/198-293 CTAGAAAGTGCAGAAATGATTAAATACGCCGCGAATGCATTTCTGGCGACAAAGATTTCCTTTATCAACGATATCGCAAACATTTGTGAGCGAGTCGGCGCAGACGTTTCAAAAGTTGCTGATGGTGTTGGTCTTGACAGCCGTATCGGC---...AGAAAGTTCCTTAAAGCTGGTATTGGATTCGGCGGTTCATGTTTTCCAAAGGATACAACCGCGCTGCTTCAAATCGCAAAATCGGCAGGCTATCCATTCAAG------CTCATCGAAGCTGTCATTGAAACGAACGAAAAGCAG
O29659_ARCFU/243-338 ATAAAAACCGCTGAAATGATAAAATACGCATCGAACGCTTTTTTAGCTACGAAGATAAGCTTCGCCAACGAGATAGGAAACATATGCAAGAAGCTTAGGATTGATGTTTACAAGGTGTTTGAGGGTGTTGGTTTGGACCACAGAATAAAT---...CCATCATTTTTCAGAGCTGGGATTGGATTCGGGGGGAGCTGTTTTCCTAAGGATGTTAGAGCTTTGATTAGGAAGTCTGAAGAACTCGGCGAGAATCCGAAG------ATACTGAAAGCTGTTATGGAAGTAAATGAGAGACAG
O34862_BACSU/196-291 TTAGCGGGAGCAGAGCTGATCAAATATGCCAACAATTTCTTTTTAGCGGCCAAAATTTCGTTCATTAACGAAATGGCCCGCATATGTGAAGCCTATCAATCAGATATCTCAGATATTTCCCGCGCTATCGGTCTAGACCCAAGGATCGGG---...AAGCACTTTTTGCAGGCAGGCATCGGATACGGAGGCTCTTGTTTTCCAAAGGATCTGCAGGCGCTGCAATTTGCTGCCCAGGAAAAAAACACGGAGACCTTC------CTGCTCCGGGCCGTGCAGCACATTAATGACACCCAG
O31279_ACEXY/206-301 CTGGAAACGGCGGAACTGATCAAATATTCCGCCAATTCATTCCTCGCGATGAAAATTACCTTCATCAATGAAATCTCGGACCTGTGTGAAAAGGTTGGCGCCAATGTGAATGACGTGGCGCGTTCCATCGGGCTGGATGGACGTATTGGC---...AAGAAATTCCTGCATCCCAGCCCCGGCTTTGGTGGTTCGTGCTTTCCCAAGGATACCCGCGCACTGACGGCAATTGGCCGCAATGCGGGATCCCCCGTGCGC------CTGATCGAGACCACGGTCGCGGTCAACGAACAGCGC
UDG_RICPR/197-292 TTAGTAACGAGTGAGCTTATTAAATATGTTTCAAATAGTTTTTTAGCAACGAAAATTGCTTTTATTAATGAAATGGCTGATTTATGCGAAAAAATCGGCGCTAACATTAAAGATTTATCTCAAGGTGTAGGACTTGATCAAAGAATCGGT---...CGAAATTTTTTAAATGCAGGACCTGGTTTTGGTGGTTCGTGTTTCCCAAAAGATATTCTGGCATTAAATAATCTTGTTGAAAATCATAAGATCGATTGTAAG------ATTCTTAAGTCAGTAATAAAGAGTAATAAGCTGCGG
O07248_MYCTU/203-300 CTGCAGACCGCGGAGTTGGTCAAGGTATCCGCCAATGCCTTTCTGGCGACCAAGATTTCGTTTATCAATGCGATCTCCGAAGTGTGCGAGGCGGCGGGTGCCGACGTTAGCCAGCTGGCCGATGCGCTCGGATACGACCCGCGGATCGGA---...CGCCAATGCCTCAACGCGGGCTTGGGTTTCGGCGGCGGCTGCTTGCCCAAGGACATCCGCGCTTTCATGGCCCGCGCCGGCGAACTGGGAGCCGACCAGGCGTTGACGTTCCTGCGTGAAGTGGACAGCATCAACATGCGCCGG
Q56812_XANCA/203-296 GTGCGCTCGGCCGAGCTGACCAAGTACGCGGCCAACGCGATGCTGGCGACCAAGATCAGTTTCATGAACGAGATCGCCAACATTGCCGAACGCGTCGGTGCGGACGTCGAGCATGTGCGTAACGGCATTGGTTCGGATCCGCGCATTGGC---...------TGGCACTTCATCTATCCGGTGCCGGCTACGGCTCGTGCTTCCCGAAGATGTGCAGGCGCTCGCAAGACCGCGCACGAGTACGGCATGCAGCCGACC------CTGCTCAACGCGGTGGAAAGCGTCAACAACGCGCAG
ALGD_PSESH/203-300 ATCGCCGTTGCCGAAATGATCAAGTACACCTGCAACGTGTGGCACGCCACCAAGGTTACTTTCGCCAACGAAATCGGCAACATTGCCAAGGCCGTCGGCGTCGATGGTCGTGAAGTGATGGACGTGGTCTGCCAGGACAAGGCGCTGAACCTGtccCAGTACTACATGCGCCCAGGGTTCGCATTCGGCGGCTCCTGCCTGCCAAAAGACGTTCGCGCCCTGACCTACCGCGCCAGCAGCCTGGATGTCGAAGCGCCG------TTGCTCAACTCGCTGATGCGCAGCAACACCTCGCAA
ALGD_PSEAE/203-300 GTCGAGGTCGCCGAGATGATCAAGTACACCTGCAACGTCTGGCACGCCGCCAAGGTCACCTTCGCCAACGAGATCGGCAACATCGCCAAGGCGGTCGGCGTCGACGGCCGCGAGGTGATGGACGTGATCTGCCAGGACCACAAGCTCAACCTGtcgCGCTACTACATGCGTCCCGGCTTCGCCTTCGGCGGCTCCTGCCTGCCCAAGGATGTACGCGCCCTCACCTATCGCGCCAGCCAGCTGGACGTCGAGCACCCG------ATGCTCGGTTCGTTGATGCGCAGCAACTCCAACCAG
ALGD_AZOVI/203-300 ATCGCCGTCGCCGAGATGATCAAGTACACCTGCAACGTCTGGCACGCGACCAAGGTCACCTTCGCCAACGAGATCGGCAACATCGCCAAGGCCGCCGGCGTCGATGGCCGCGAGGTGATGGAAGTGGTCTGCATGGACAACAAGCTCAACCTGtccCAGTACTACATGCGGCCCGGCTTGGCGTTCGGCGGTTCCTGCCTGCCCAAGGACGTCAGCGCCCTCAGCTACCGTGCCCACCTGTGGGACATCGAGGCGCCG------CTGATCAGTTCGCTGATGCGCAGCAACGCCGCCCAG
UDG_STRPY/197-290 GCTTCAGAAGCTGAAGCAGTAAAACTATTTGCCAATACTTATTTAGCGTTAAGGGTAGCTTATTTTAATGAGTTAGACACTTACGCAGAATCGAGAAAATTAAATAGTCACATGATTATTCAAGGAATTTCTTATGATGATCGAATAGGA---...ATGCATTATAATAACCCATCATTTGGTTATGGAGGTTATTGTCTACCTAAAGATACGAAG------CAATTATTGGCAAATTACAATAATATTCCCCAAACA------CTAATTGAAGCTATCGTTTCATCAAATAATGTGCGC
Q54365_STRLN/196-291 CTCACCGAGGCCGAGCTCGTCAAGCACGCCACCAACGCCTACCTGGGCATGTGCGTGTCCTTCGGCAACGAGCTCGGCTGGCTCGCCGCCCACCTGGGCGCCGACCCTCAGGTGGTGGCGCGGCTCCTGAAGGCCGACCCGAGGGTGGCCGAC...GCGGCGCCCCTGCTGCCCGGCGCGGCGTTCTCCGGGGCCACCCTGCGCCGTGACCTGGTGGCGCTCAGCCGGATCGGCGCGAAGTGGGGCCGGCCGGAGTTC---------TTCGACACCGTTCTCACCGTCAACGACCGGCAC