EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00908 alignment
(18 sequences with 555 bp)


O33707_STRPE/3-179 GCGCGGGAACTGGCGGTGCAGGGGGCGTACACGTTCGAGCCGGAGGTGTTTCCGGACGAGCGGGGGCTGTTCGTCTCACCGTTCCGGGAGGATGCGTTCACGGCCGCGGTCGGCCACCCCCTCTTCCCGGTGCGGCAGACGAATCACAGCCGGTCGCGGCGCGGGGTGGTGCGGGGCGTGCACTACACCGTGACGCCGCCGGGCTCGGCCAAGTACGTGTACTGCGCCCGTGGCAGGTCGCTGGACATCGTCGTCGACGTGCGGGTCGGCTCCCCGACGTACGGCCGGTGGGACGCCGTCGAGCTGGAGCCGCGTGAGTTCCGGGCGGTGTACTTCCCGGTCGGGGTGGGGCACGCCTTCGTGGCCCTGGAGGACGAC...ACCGTCATGTCGTACATGCTGTCCGGGGAGTACGTGCAGGCCAACGAACTCGCCGTGTCGGTGCTGGACCCGGCCCTCGGGCTGCCCGTGCCG------GGTGACCTGGAGCCT---.........---CTGCTGTCCGGCCGGGACCGGGCTGCACCGCCCCTGGAGCAGGCC
STRM_STRGR/1-175 GTGCGCCCGCTCAGTGTGCAAGGGGCCTGGCTGTCGGAAACCCGTGCGTTCGCCGACGACCGAGGCGAGTTCCAGGAGCTGTACAGCGCCCGGTCGCTGCGCGGTGCGCTCGGCTACGACCCCGGG---GTCGCCCAGGTCAACCGGTCCGTCTCGCGGCGCGGGGTGCTGCGCGGGGTGCACTTCGCGCAGCTCCCGCCCAGCCAGGCCAAGTACGTCACGTGCCTCAGCGGGGCGGTGCTGGACGTGGTGGTGGACATCCGGACGGGCTCGCCCACCTACCGGGCCTGGGAGGCCGTCCGGCTGGACGACCCGCACCGC---AGTCTCTACGTCGAGGCCGGGCTCGGTCACTCCTTCATGGCCCTCACCGACGAC...GCCGTCGTCGTCTACCTCACCTCGCAGGGGTATGCCGCCGGCCGGGAGCACGGGGTGCACCCCCTCGACCCGGACCTCGGCATCGCCTGGCCC------GACGGCATCGAACCG---.........---GTGCTCTCCGAGAAGGACCGGCAGGCGCCGGGCATCGCGGAGATG
O06330_MYCTU/3-180 GCACGCGAACTCGACGTCCCCGGCGCCTGGGAGATTACCCCGACCATCCATGTCGATTCCCGCGGACTGTTCTTCGAATGGCTTACCGATCATGGGTTCCGCGCATTCGCAGGTCACAGTTTGGAC---GTCCGGCAAGTGAACTGCTCGGTGTCATCGGCCGGTGTGCTGCGCGGCCTGCACTTTGCCCAGTTGCCGCCGAGCCAGGCCAAGTATGTGACCTGCGTTTCCGGCTCGGTGTTCGATGTCGTCGTCGACATCCGAGAGGGCTCACCGACATTCGGCCGATGGGACTCGGTGCTGCTCGACGACCAAGACCGTAGGACGATCTACGTCTCCGAAGGCCTAGCGCACGGCTTCCTTGCACTGCAAGACAAT...TCGACGGTGATGTACTTGTGCTCGGCGGAATACAATCCGCAGCGCGAGCACACCATCTGCGCCACAGATCCGACGTTGGCGGTCGATTGGCCGCTGGTCGATGGCGCTGCCCCC---.........---AGCCTGTCCGACCGTGATGCCGCTGCGCCCAGCTTCGAGGATGTG
Q57502_YERPS/12-182 TTTAAAAAATTGGATATTGAGGGTTGTTACCTTATAGAATTTAATAAATTCATTGATTCCCGAGGAACGTTTGTAAAAACATTTCACTCGGACTTTTTTTCTGAGAATGGAATAGTTTTG---GATATGCGAGAGGAGTTTTATTCAATATCAGCTAAG---AATGTTATACGGGGTATGCATTTTCAAATGCCTCCAGCTGAACATGACAAACTCGTCTATTGTGTAAATGGAGCTGTTCTTGATGTTATCTTAGATATAAGAAAAGATTCTAAAACATATGGGGAGTATTTTAGTATTGAATTAAGTTATGAAAATAGCTTAGCACTATGGGTGCCAAAAGGTTTAGCCCATGGATTTTTATCACTTGCAGATAAT...TCAATAATGTTTTATAAAACAAGTTCTGTTCACAATGTTGAGTGTGATTCTGGTATTAAATGGAAT------TCATTTGGATTTAAATGGCCGATTGATAAT---------------.........CCAATTATATCTGAGAAAGAT---AATTCTCTTTGCTATTTTGATGAG
Q54202_STRGA/3-177 ATTCATGAAACTCCGCTGGCCGGCGCCGCTCTCATCGAACTGAGCGAATTGAGGGACGAAAGGGGGTTCTTCTCCCGCTCGTTCTGCCGGGAGGAGTTCGAGCGGGCGGGACTGGAGCCC---GCCGTGGTCCAGTGCAATCTCTCGTTCAACCACCGCGCCGGCAGCCTCCGCGGATTCCACTATCAGACGGAGCCGAACGCCGAGGCGAAGACGATTCGCTGCACGCGCGGCGCGATCTACGACGTGATCGTCGATCTGCGTCCCGACTCCCCCACGTTCCTGCGGCACTTCGGCGCGGAACTCACCGCCGACAACCGGCTCGCCCTGCACGTCCCCCGCAACTTCGCGCACGCGTACCTGACACTGGCCGACGAC...ACGGAGACGGTGTACCAGGTCTCCGCCGCCTACACCCCCGGCGCGGAAAGGGGTCTGCGCTGGAACGATCCGGCGCTCGGGGTCGAGTGGCCGGCGCCGGTGAAG---CTG------.........------GTGTCGGACAAGGACGCCGGCTGGCCGCTGCTGTCCGAGGTG
P72887_SYNY3/9-183 ACTGAAGATTTGGGCATTGCCGGACTCAGAACCGTTATCCGTCAGCCCATCGGCGATCGCCGGGGATTTTTGGCCCGTTTGTTTTGTGCTGAGGAGTTGAAGGAAGTAGGTTGGCATAAA---CCCATTGCCCAGATTAACCATACCCATACGGCCCAAGGCGGCACTGTGCGAGGTATGCATTACCAAAATCCTCCCTCTGCGGAAATGAAATTGGTTACTTGCATTCGGGGTCAGGTTTGGGATGTGGCGGTGGATTTGCGGGTTGATTCCCCCACTTTTTTGACTTGGCAAGGGGTAGTACTAAGTGCGGATAACAATAGGGCATTGTTGATACCCGAAGGCTGTGCCCATGGTTTTCAAGCCTTGAGCGATGAT...GTTGAATTGATTTACTGTCACTCGGTCGCCTATAACCCGATGGCGGAAGGGGGGTTGAATCCCCAAGATCCTCGCCTAGGGATTGAGTGGCCCCAAGCAATTACC---GAA------.........------TTATCCCAGCGAGACCAAAATCACCCCTTACTAGATTCCACC
Q56904_YEREN/3-184 TGTACAAAACTATCTATTCCTGAAGTGATTTTGTTCGAACCTCGTATTTTTGAAGATGATCGCGGACATTTTTTTGAAAGTTTCAATCTGGCGAAATTTCAAGAATCAATTGGACGTCAGGTAACATTTGTACAATCTAATGAGTCGTATTCGAAGCAA---AATGTTATTCGGGGGCTGCATTATCAAGTTATTCGC---CCTCAAGGGAAATTAGTGAGAGTCGTTGAGGGTGAGGTTTTTGATATTGCTGTAGATTTGCGTAAATCTTCACCAACTTTTGGGCAATGGGTAGGTGTGCTCCTATCTGACAAAAATAATCATCAACTCTGGATTCCTGAAGGTTTCGGCCACGGATTCCAAGTTCTGTCACCATCA...GCTAAATTCCAATATATGGTTACTGATTATTGGTACCCTGAGCATGATCGATGTATTCGTTTTAATGACTCTGATATAAATATAAAATGGAAAGAGGGGATTATATCCGAACAGCAAgttattgagTACAAACTATCGAGTAAAGATATTTCTGGTAATTCTTTAGCTGATGCT
RFBC_ECOLI/3-178 GTGATTAGAACTGAAATTGAAGATGTGCTAATTCTGGAGCCAAGAGTATTTGGTGATGATAGAGGTTTCTTTTATGAGAGCTTTAATCAATCAGCATTTGAACATATTCTAGGCTATCCGGTCAGCTTTGTTCAAGACAATCACTCACGTTCATCAAAA---AATGTACTCAGAGGCCTTCACTTTCAACGCGGCGAGTACGCACAAGATAAACTTGTACGCTGCACTCATGGAGCAGTTTTTGATGTTGCTGTTGATATTCGACCCAATTCGGTATCCTTTGGTAAATGGGTTGGTGTTCTGCTTTCAGCTGATAATAAGCAGCAGTTGTGGATACCAAAAGGGTTTGCTCATGGCTTTTTGGTTCTGTCTGATATC...GCTGAATTTCAATATAAAACTACAAACTATTATCATCCTGAAAGCGATTGTGGAATATGTTGGAATGATGAACGCATTGCAATTGATTGGCCCCAAACATCAGGGTTAATCCTTTCG.........---------CCA---AAAGATGAAAGGCTCTTTACGTTAGATGAGCTT
RFBC_SALTY/4-179 GTGATTAAAACAGCAATACCAGATGTCTTGATCTTAGAGCCTAAAGTTTTTGGCGATGAGAGGGGATTCTTTTTTGAAAGTTATAACCAGCAGACCTTTGAAGAGTTGATTGGACGTAAAGTTACATTTGTTCAAGATAATCATTCAAAATCCAAAAAG---AACGTACTCAGAGGGCTACATTTTCAGAGAGGAGAAAATGCACAGGGGAAGTTAGTTCGTTGTGCTGTCGGTGAGGTTTTTGATGTTGCGGTCGATATCCGAAAAGAATCGCCTACTTTTGGTCAATGGGTTGGTGTAAATCTGTCTGCTGAGAATAAGCGACAGCTTTGGATTCCAGAAGGTTTTGCTCATGGTTTTGTTACTCTTAGTGAGTAT...GCAGAGTTTCTGTACAAAGCAACTAATTATTACTCACCTTCATCGGAAGGTAGCATTCTATGGAATGATGAGGCAATAGGTATTGAATGGCCTTTTTCTCAGCTGCCTGAGCTTTCA.........---------GCA---AAAGATGCTGCAGCACCTTTACTGGATCAAGCC
RFBC_SHIFL/3-177 GTAATTAAAACTGAAATTCCTGATGTGCTAATTTTTGAACCAAAAGTATTTGGTGATGAGCGGGGCTTTTTTATGGAAAGCTTCAATCAGAAAGTTTTCGAAGAGGCTGTAGGACGAAAGGTTGAGTTTGTTCAGGATAACCATTCTAAATCAACTAAG---GGTGTGTTACGCGGACTGCACTATCAGCTGGAACCTTATGCTCAAGGAAAACTGGTACGCTGTGTTGTCGGTGAAGTTTTTGACGTAGCTGTTGATATTCGGAAATCATCACCAACATTTGGCAAGTGGGTTGGTGTAAATTTGTCGGCGGAGAATAAGCGTCAATTATGGATACCGGAAGGATTCGCTCATGGGTTTTGCGTTCTTAGTGATGAA...GCAGAATTTGTCTACAAAACAAATAATTTCTATTCAAAAATGCAAGAGCGTGGGATTTTATGGAGCGACAAAAGTATAAATATAGAATGGCCGGTTCAAAAT---CCATTGCTTTCT.........---------GAT---AAAGATATTAATGGTCAAAAATTTGTAGATGCT
P74488_SYNY3/3-177 GTGATTCCCACAACTATCGCCGATGTGTTGATTTTGGAGCCCAAAGTCTTTGGCGATGAACGGGGTTTTTTCTTTGAGAGCTACAACGACAAGGTTTTCCAGCAGGCAGTGGGCATAGAACCCCATTTTGTGCAGGACAATCATTCCTTTTCTCGTCAG---GGGGTAGTGCGGGGGTTACATTATCAAATCCAGCAT---CCCCAGGGAAAATTAGTTCGGGTGGCCCGGGGAGAAATTTTTGATGTGGCAGTGGATCTGCGCCGTAATTCCCCTAGTTTTGGCCAGTGGGTGGGTTGTGTGCTCAATGACCACAATAAAAGACAGCTATGGATTCCCGCCGGTTTTGCCCACGGTTTCGCCGTTCTTTCCCCGGAG...GCAGAGGTGCTGTATAAAGCAACGGATTACTATGCACCGTCCTATGAGCGCACCCTATTGTGGAATGACCCGGCCATTGGCATTGATTGGTCGTTAACCACCACTCCCCTA------.........------TTATCTCTCAAGGATCAACGGGGTCTTCCCCTAGCCGAAGCG
RFBC_NEIGO/3-176 ATCATCGACACCGCCCTCCCCGACGTAAAACTTTTAAAACCGCAAGTCTTCACAGACGGGCGCGGTTTTTTTATGGAAACATTCCGCGACGGATGGTTCAAAGAAAATATTGCCGATCGA---ACTTTCGTGCAGGAAAACCACTCCAACTCCAGCAAG---GGCGTATTGCGCGGCCTGCACTACCAAACCGAAAAC---ACCCAAGGCAAACTCGTACGCGTAGTTGTCGGCGAAGTGTTCGACGTGGCCGTCGATATGCGCGAAGGTTCGCCGACTTTCGGCAAATGGGCGGGCGCAACCTTGTCGGCGCAAAACCGATACCAGCTTTGGATACCCGAAGGCTTCGCACACGGTTTTTGCGTTTTGGGCGACGCG...GCGGAAGTCGTGTACAAATGCACGGACTATTACAACCCTGAAACCGAACAGGTTTTAATATGGAACGACCCGGCAATCGGCATAGGCTGGCCGCTTCAAACCGCGCCGCTG------.........------CTTTCGCCCAAAGACCTTGCCGGCAAAACGTGGGCACAAGCC
O27818_METTH/6-176 TTCATAAAAACCAGCCTTGATGGTGCCATAATCATAGAACCCGAGGTGTACACGGACGAGAGAGGATACTTCATGGAGACATTCAATGAGGCCATATTCCAGGAAAATGGCCTTGAAGTC---AGGTTTGTGCAGGACAACGAGTCTATGTCAGTTAGG---GGTGTCCTCAGGGGACTGCACTTCCAGAGAGAAAAG---CCCCAGGGAAAACTTGTGAGGGTTATAAGGGGCGAAATCTTTGATGTTGCAGTGGACCTCAGGAAGAACTCAGATACCTATGGTGAATGGACTGGCGTCAGGCTCTCAGATGAGAACAGAAGGGAGTTTTTCATCCCAGAGGGCTTTGCACATGGATTCCTGGCCCTCTCAGATGAG...TGCATAGTTAACTACAAATGCACCGAGCTTTACCACCCTGAATATGACTCAGGGATCCCCTGGGACGACCCTGACATTGGAATAGACTGGCCACTTGAAATGGTGGATGATCTGATA.........------ATCTCAGAGAAGGACAGA---------------AACTGGAAA
Q56809_XANCP/3-175 GTGATCGAAACGACGTTGCCCGGCTGCGTCGTCATCGAGCCTGCGGTCTTCGGTGATGAGCGCGGTCAGTTCTTCGAAACATGGAATGCGGAGCGCTTTGGGCAGCACGGCCTGCCGACG---AGTTTTGTGCAAAGTAACGTCTCCACGTCCGCCAGG---GGCGTGCTACGTGGTCTGCACTATCAGTGGCCTCGA---CCGCAGGGCAAATTGGTGAGCGTGCTTGAAGGCGAGGTGTACGATGTCGCGGTGGATATCCGCGCTGGGTCTCCCCACTTCGGGCGTTGGACCGCTGTTTTACTGAGCGCAGAAAATCGACGCCAAGTCTGGATACCTGAAGGCTTTGCACATGGTTTCGCAGTACTTTCAGAGAAA...GCATTGTTCAGCTATCTGTGCACCGATGTGTACGTCAAGGAAGCGGATGCAGGCGTGCGTTGGGACGATGCGGCGATCGGGATCGATTGGCCGGTCAGCGAT---------------.........CCGTCGCTGTCCGCCAAGGATGCCAAGGCGCCGTTCCTGGATGAGGTG
RFBC_RHISN/11-186 TTTCAAAGCCTGTCGATAGCCGAAGTCAAGTTAATTAGGCCTAGGAAGTTTGGCGATTGCCGCGGCTATTTCAGCGAAGTATTCAGGGAAAAATGGTTCCGCAAAAATGTTGCCGATGTC---GGACTTGTTCAGGATAATGAATCACTCTCCGCTCAGATCGGGACGGTAAGGGGCCTTCACTTTCAGCTCGAGCCTTTCGCGCAAGGAAAGCTTGTCCGCTGTACACGCGGCGCGCTGTTCGACGTCGCGGTGGACGTCAGGGTCGGGTCACCAACATACGGGAAATGGGTTTCCGCCGAGCTATCTCAGGAAAATGGCGCGCAGCTTTGGGTTCCTGCGGGCTTCGCGCATGGTTTCATGACGCTTAAGGCGGAC...ACGGTAATCAGCTACAAGGTGACAGCGCCCTATAGCGCTGAACATGATCGCGGACTGAAATGGGACGATCCCGCCATCGGAATCAATTGGCCAAAGATGACCACG------------.........TACGTTCTGTCGGAAAAGGACTCCAGTCAGCCATCACTCTGCGAACTT
P96449_RHIME/4-180 GTCAGGTCCCTGGGCCTCGACGGGGTTCTGGAAATCGTTCCGCGCAGACTCGGCGACGAGCGCGGCTTCTTTTCGGAGACCTACAATGCGGAGACCCTCGCCGCCCACGGCGTCGCGGCG---ATCTTCGTACAGGACAACCATTCCTATTCCGCGGCTGCGGGCACGCTGCGCGGCCTGCACTATCAGCTTCCGCCCAAGGCGCAGGCGAAGCTCGTTCGCGTTGTTCGAGGCCGGGTGTTCGATGTCGTGGTCGACATTCGCAAGGGTTCGCCGACCTTCGCGAAATGGGTCGCTCTCGAACTCTCGGCGGAGAAATGGAACCAGATTCTGGTGCCTGTCGGCTTCGCCCACGGCCTCGTGACGCTCGATCCGGAA...ACGGAAGTTCTCTACAAGGTAAGCGAGCATTACAGCGCTGAGCATGAGCGGTCCATCCGCTACGACGATCCTGAGATCGGCATAGGCTGGCCTGCCGCTACCGACCGT---------.........CTGCAACTGTCCGCGAAGGACAGGAACGCACCACTGCTCCACGAATCC
P74831_9SPHN/4-180 GTGCATCACCACGCGCTATCGGGCGTCATCGAGTTCACCCCGCCCAAGTACGGCGATCACCGCGGCTTCTTCTCCGAGGTGTTCAAGCAGTCCACGCTCGACGCCGAAGGCGTCGAGGCG---CGGTGGGTGCAGGACAATCAGAGCTTCTCGGCCGCACCGGGCACGATCCGCGGACTGCACCTGCAGGCGCCGCCCTTCGCCCAGGCCAAGCTGGTGCGCGTGCTGCGCGGCGCGATCTACGACGTCGCGGTCGACATTCGCCGCGGCTCGCCCACATACGGCCAGTGGGTCGGCGTCGAGCTTTCGGCGGACAAGTGGAACCAGCTGCTGGTGCCGGCCGGCTATGCGCATGGCTTCATGACGCTCGTCCCGGAT...TGCGAGATCCTCTACAAGGTCAGCGCCAAATATTCGAAGGAATCGGAGATGGCGATCCGCTGGGATGATCCCGATCTCGCCATCACCTGGCCGGACATCGGCGTCGAG---------.........CCGGTGCTCTCCGAAAAGGACGCGGTCGCTACCCCGTTCGCCGAATTC
P71436_LEPIN/3-180 TTTAAAAAATTTCAGATAGAAGGTCCAGTTTTAATTGAACCTAAAGTTTTTGGAGATGAAAGAGGTTTTTTTTTGGAAACCTTTAAGGCATCTATTTTCGAAAAAGAAAACATACCATTT---CAATTTTCCCAAGACAATCATTCTAGATCTTCTCGA---GGGGTATTGAGGGGGATGCATCTGCAAATTCCTCCTTACGATCAAGGAAAGTTAGTCCGAGTAGTGAGAGGTAAGGTGATAGATGTGGTGGTAGACGTTAGGGTAGGTTCCCCCAATTATGGAAAATGGCTTTCCGTGGAATTATCTGAAGAAAATAAAAATATATTTTGGGTTCCTCCTGGATTTGCTCATGGATTTTTAACCTTAGAAGATAAA...ACAGATTTTTTATATAAAGTGACCGGAGAATACAGTCCTCAGAATGAGGTAGGAATTCGTTGGGATGATCCTGCGTTAGGTATTCCTTGGAAGACATGGTTGTCTGATTCTGAA---.........TTTATAGTATCTCAGAGGGACCAAGTGACTCCTTTTTTTGCAGACTTT