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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00773 alignment
(23 sequences with 509 aa)


ZAM_SYNY3/167-540 QNLGEAVDHLVHVSVL.--RYPIAQHPPLG......EVTKVLGSDAEAAADTDIVSCKHDLPLGWTPEAIEALQSLPK.---.-.-------VIEPGELKKRTWITAKLQLVTFGDGPRge................tlpWQEVALSLESQANQ-.-...-WQVGIHITDIAHYIAEDSLLDQL.........ARKRGTTVYLE.EQICPLFPEGLI-GRCSLIPDEDRLALSFFLTVDDRG---......EVTGFEYHSSVVKV..DHQLDFSEVQTALADIeSVSG----.............---.-.ELKPYGGLLQEL........FFQICPLIKSQRLQRGSFNLQTETASPRLDE--.........-.GRLGVIMTQ----ETLPIRSLLAELMVVLQREVALQLQALGIPG-....LYCGQVAPEGEDLTDIVKLAGNLDLGVKIDLEG............--DIIPQHYHHLSQGFESLPAKAVLNHLLANTLKIEKYFS
YR86_CAEEL/220-607 SRPKDFERFLYTAKIT.--DWRAESVYADG......RLVKLLGMSGEIDTETERIVYEHQIDHREFSDECLESLPITTaEN-.-.------WKVPDAEFEYRRDFRSDIVFTIDPKTAR.....................DLDDALHAKHIDDCDgKgtpGLEIGVHIADVTFFLKEGTELDKW.........ASERGNSTYLS.QTVIPMLPRILCEQLCSLNPGVDRLSFSTVFKMSYEA---......ELYDVWFGRSVIRS..RVKLAYEHAQDFIENPeKDFTCDEL.............PDIsDgNTPFEIKEKTLM........LHRIAQVLRQKREDSGALRIELPRLKFALDED-.........-.KKPQGVSI----YEIKDSNKLVEEFMLLANMEVAKKIAENFPEHA....LLRNHPPPKEKMIKDVAEQCARIGFPLDG----............---RTSGLLSTSLRKYQGKSRLDMCIRQVISSLTIKPMQQ
O14040_SCHPO/362-742 ENILKHHDQLFSVEIT.--RWSIYSRYPMG......VLGEKLGNITDVEAYTNALLLENGISSSPFSDEVLNCLPPDD.---.-.------WIISHEEIKKRRDLRNELIITIDPETAR.....................DLDDAVSCRALDNG-.-...TYEVGVHIADVTHFVKPDSALDKE.........AASRATTVYLV.QKAIPMLPPLLCERLCSLNPNVERLAFSVFWKLDSNGK--......EIGKRWFGKTVIKT..CARLAYSEAQGVIEG-.KSWDDAVG.............KPIgGtHTPKDVETSILT........LCEISRKLRKDRFAKGAVEINSTELKFQLDEY-.........-.GMPNKCEV----YEQTDANHLIEEFMLLANRSVAEHISKNFSNNS....LLRRHASPKEKQINEFCHFLKSMNFDFDAS---............-SSAAFNASMVRLRSTFNEELVELFENMAVRSLNRAEYFC
RRP44_YEAST/439-815 RRAAELLDKRIVISID.--SWPTTHKYPLG......HFVRDLGTIESAQAETEALLLEHDVEYRPFSKKVLECLPAEGhDWKaPtKLDDPEAVSKDPLLTKRKDLRDKLICSIDPPGCV.....................DIDDALHAKKLPNGN.-...-WEVGVHIADVTHFVKPGTALDAE.........GAARGTSVYLV.DKRIDMLPMLLGTDLCSLKPYVDRFAFSVIWELD-DSA--......NIVNVNFMKSVIRS..REAFSYEQAQLRIDD-.K-----T-.............---.-.-QNDELTMGMRA........LLKLSVKLKQKRLEAGALNLASPEVKVHMDSE-.........-.TSDPNEVE---IKKLLATNSLVEEFMLLANISVARKIYDAFPQTA....MLRRHAAPPSTNFEILNEMLNTRKNMSISLE--............----SSKALADSLDRCVDP-EDPYFNTLVRIMSTRCMMA-
DIS3_SCHPO/411-780 RQAPRLVGRRIVVAID.--LWDASSRYPEG......HFVRDLGEMETKEAETEALLLEYDVQHRPFPKAVLDCLPEEGhNWKvP.------ADKTHPLWKNRKDFRDKLICSIDPPGCQ.....................DIDDALHACVLPNGN.-...-YEVGVHIADVTHFVKPNTSMDSE.........AASRGTTVYLV.DKRIDMLPMLLGTDLCSLRPYVERFAFSCIWEMD-ENA--......NIIKVHFTKSVIAS..KEAFSYADAQARIDD-.Q-----K-.............---.-.-MQDPLTQGMRV........LLKLSKILKQKRMDEGALNLASPEVRIQTDNE-.........-.TSDPMDVE---IKQLLETNSLVEEFMLLANISVAQKIYDAFPQTA....VLRRHAAPPLTNFDSLQDILRVCKGMHLKCD--............----TSKSLAKSLDECVDP-KEPYFNTLLRILTTRCMLS-
RRP44_CAEEL/397-762 EQAETLSQQRIVVAID.--HWPRDSKYPLG......HYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPRE-.EWEpD.-----LTENRGPLP--RVDLRDLTICSVDPLGCT.....................DIDDALHCKQIGEDL.-...-FEVGVHIADVTHFVRPGTAIDDE.........AALRGTTVYLC.DRRIDMLPCLLSSNLCSLRGEEERYAFSCIWTMT-SSA--......DIQSVKYHKSLIKS..KAALTYEKAQEIIDD-.P-----K-.............---.-.-EQNDVALGLRG........LMKLSKVLNARRTGNGALTLASSEVRFDMDWE-.........-.SRTPKKVM---EKQHLDTHSMVEEFMLLANISVAEKILEEYPDCA....LLRRHPVPLKESYKPLVEAAR-HRGFEIIVE--............----SGKGLADSLNRCVDK-KNPMLNRLLRMLTTRCMTQ-
RNR_MYCPN/186-556 VPAELESNTKVAFQID.-EYDPA-NNLCKV......SIQQILGNNDEPLINLKAIMLDHSIVFEDNDVVEQQAAKLQF.---.-.-------DEKEQSKPYRKDLTELAFVTIDPATSK.....................DLDDAIYVKRTDKG-.-...-FVLYVAIADVAYYVQRNSELDIE.........ARHKTSSIYLPgYYVVPMLPERLSNELCSLNPNEKRYVVVCELNFDHEA---......RLNFSEVYPATIVS..QRRFAYSEVNDWLED-.SDALKDE-.............---.-.-SA-TVLESLKA........GFTLSELIAEQRKKKGTIDLSHSETEVVVDQN-.........-.YYPIEIRF----LTHGKAETMIENLMVVANEAVAWTLTNHKVHL-....PYRVHPRPSKKKLQMLLENIVELKITQPN--FV............LDTVTSTQIAAWLKENKDNPSYDIFVILLLRTLGKAFYIV
RNR_MYCGE/186-555 IPNNLASNTKIAFQID.-EYDPD-NNLCKV......SVQQVLGNNDDPLINIKAIMLDNSIVFETNDVVEQHANKLSF.---.-.-------DTEEQHKAYRQDLTDLAFVTVDPTTSK.....................DLDDAIYVKTIPTG-.-...-FVLYVAIADVAHYVNRNSEIDIE.........AKHKTSSIYLPgHYVVPMLPEQLSNQLCSLNPAQKRYVVVCEISFDNQG---......RIKTNKLYPATIIS..KNRFSYDQVNKWLNN-.KSELNCD-.............---.-.--E-TVINSLKA........AFTLSDLIQAQRQKRGTIDLSHKETEIVVDEH-.........-.YFPIKINF----LVHDKAETMIENLMVVANETVAWVLTNNKIAL-....PYRVHPRPSKKKLQSLIETVGELNITKPQ--FN............LDTVTSSQIASWLNENKDNPSYEIFVILLLRTLGKAFYSV
RNR_AQUAE/162-530 DCQKLKEGEVVVLKIT.--QFPTKKSPARG......KVIEVLGNPKEKFIAIDVIIRKYNLPTSYPEKVIKEVEAIPE.---.-.-------EIPEEEIKRRRDLREQLCFTIDPEKAG.....................DFDDAVAIELTPEG-.-...YYKLYVHIADVSYYVREGTETDKE.........AYKRGFTYYFP.DRALHMLPEKLSAKLCSLRPNEDKLAFTVEMVFDESG---......NLKAYDIYESVIRS..KARLTYNEALALIVG-.DPALEKK-.............---.-.-FP-NLVEPLRM........METLYRILSRKRWEMGSIDFDLPEAEVIVDEY-.........-.GEPTAIYP----YERHVAHRIIEHFMISANETVALHLEHAGYPC-....LYRVHEPPDEEKVENLLEILEGLGYKVKR----............PHEYTPKFFQKIIEDFEGRPEENLVRFLTLRAMARAKYSP
RNR_BACSU/170-540 GKNGAAEGHKVVVKLT.--SYPEGRMNAEG......EVETILGHKNDPGIDILSVIHKHGLPGEFPADAMEQASSTPD.---.-.-------TIDEKDLKDRRDLRDQVIVTIDGADAK.....................DLDDAVTVTKLDDGS.-...-YKLGVHIADVSHYVTENSPIDKE.........ALERGTSVYLV.DRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQG---......QVTEHEIFQSVIKT..TERMTYSDVNKILVD-.DDEELKQ-.............---.-.-KYEPLVPMFKD........MERLAQILRDKRMDRGAVDFDFKEAKVLVDDE-.........-.GAVKDVVI----RERSVAEKLIEEFMLVANETVAEHFHWMNVPF-....IYRIHEEPNAEKLQKFLEFVTTFGYVVKG---T............AGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKYDP
RNR_CHLPN/126-492 PGRTYKIGDRILLSTPpWVDKPQEGASPAL......QMLEFIGHITNAKADFQAIQAEYNLAEEFPPEVIEEASLFSQ.---.-.-------KHITQVLHSRKDLRDLLCFTIDSSTAR.....................DFDDAISLTYDHNN-.-...NYILGVHIADVSHYVTPHSHLDKE.........AAKRCNSTYFP.GKVIPMLPSALSDNLCSLKPNVDRLAVSVFMTFTKSG---......HLSDYQIFRSVIRS..KYRMTYDEVDNIIEK-.KH------.............---.-.-SH-PLSKILNE........MATLSKKFSDIREERGCIRFVLPSVTMSLDNL-.........-.QEPVALIE----NHQTFSHKLIEEFMLKANEVVAYHISHQGVSL-....PFRSHEPPNDENLLAFQELAKNMGFDIT---FT............PTQEP-DYQYLLQTTSAGHPLEQVLHSQFVRSMKTASYST
RNR_CHLTR/123-489 PKRTYKLGDRLLLKTPvWKENYPSREPPPL......AMLEFIGNISNAKTDFPVIKAEFSITEEFPDAVVQEASQFLQ.---.-.-------KHVTQALHSRKDLRDLLCFTIDSSSAK.....................DFDDAVSLTYDHEG-.-...NYILGVHIADVSHYVTPNSALDRE.........AAKRCNSIYFP.GKVIPMLPSALSDNLCSLKPNVDRLAVSVFMTFSKEG---......FLSDYRILRSVIRS..KYRMTYDEVDEIIEK-.KQ------.............---.-.-TH-PISKTILK........MAELSRIFSDIREQRGCTRLVLPSFTMSLDNL-.........-.QEPVALIE----NKQTAAHKLIEEFMLKANEVIAYHISHQGITM-....PFRTHEPPNEESLLVFQETAKAMGFTIT---QT............PAQEP-DYQYLLQETTAGHPLEPILHSQFVRSMKTASYST
RNR_HELPY/133-492 KPVSLKHSQKSLLELP.-RHCVVKIDTKKR......EISEILGALEDPLIDEN-LSLSLFDRVKDFSKDCLNLAQHYA.---.-.-------QLKASDFKDRINYSHIPFITIDPKDAK.....................DFDDAIFYDQEKR--.-...--VLFVAVADVSEFVPKHSSLDKE.........ARVRGFSVYFP.NSVYPMLPLSLSQGACSLKAFEKRLALVYEIPLDN-----......-LKNARLSQGVIEV..RANCTYEEINHFLSA-.NQSSLDK-.............---.-.----DLQQSLLG........FLEMALKLKKERLKKG-FNFNSFENKLYLNKE-.........-.GRIEKIET----EKESDAHTLIEEAMLLANQSSARLLDEHFHNKG....IYRTHKEPSLEQQKRLYDKLFDYEIVRP---KN............MGFFPFLEHALKIAKEKSIEREVSRLIIKSQNL--ALYSP
RNB_HAEIN/118-489 VKEELQEGDWVVANLK.--------THPLR......DDRFFYATINQLICRADDELAPWWVTLARHEQSRYPVRGAEP.---.-.-------YEMLDQ-KTRENLTALHFVTIDSESTM.....................DMDDALYIEPIAQNStQ..tGWKLVVAIADPTAYIALDSQIEQE.........AKQRCFTNYLP.GFNIPMLPRELSDELCSLIANETRPALVCYIETDLTGN--......ITAKPHFVSAYVQS..KAKLAYNKVSDYLEQ-.ADNAWQP-.............---.-.-EMPETAQQIHW........LHQFTKARIQWRKTHSLFFKEKPDYAFVLAEN-.........-.GKVQEIKA----EYRRIANQIVEEAMIIANICAAQFLHEQAKTG-....IFNTHSGFDKKFLENAHNFLMANLANEQNQTEL............AERYSVENLATLNGYCQMRHDIEPIESDYLELRLRRYLTF
RNB_ECOLI/118-474 LNHEFKEGDWAVAEMR.--------RHPLK......GDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVA-.---.-.-------TEMLDEGLVREDLTALDFVTIDSASTE.....................DMDDALFAKALPDDKlQ...---LIVAIADPTAWIAEGSKLDKA.........AKIRAFTNYLP.GFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGT--......IEDNIEFFAATIES..KAKLVYDQVSDWLEN-.TG-DWQP-.............---.-.-ESEAIAEQVRL........LAQICQRRGEWRHNHALVFKDRPDYRFILGEK-.........-.GEVLDIVA----EPRRIANRIVEEAMIAANICAARVLRDKLGFG-....IYNVHMGFDP-----ANADALAALLKTHG----............-LHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSF
RN2H_SYNY3/178-531 LRLEALEKFILFPEQN.-HRQALDILQTLGkpgrtdETQNLLIELGIWQRHENLFLRRSAYPNQFPAKVSDVAHAYLT.---.-.-------NPPPDPDQERFDLTTLKTYTIDDESTS.....................EIDDGLSVETLADGG.-...-HRLWIHVADPTRLLSPNDELDLE.........ARKRSTSLYLP.TGMISMFPPELATGPMSLLQGQRCVALSFGVTLDEVG---......AVRDFTIAPSWVKP..TYRLTYEDVDEMLVL-.--------.............---.-.--KIQGEPELPL........LAEAAKKRAQWRKSQGAITIKMPEAIIKVNAD-.........-.EEVQIYLQ-----ETSVSRQLVAEMMILAGEVAGRFCQEHGIPV-....PFRGQPQPELPSDEELLSLPP------------............-----GPVRECAVRRCMPR-SEVGITPSRHASLGLDLYSQ
MSU1_YEAST/450-830 RKIERYKDCDITRDIC.--QDLINEITPNS......-IPNPLLLNMDLALPASSKLVKWQQKLYDLTNIEELQWK---.---.-.---------KSGTDDDRYDFGDLRVFCIDSETAH.....................EIDDGVSVKNYGRDG.-...LYTLYIHIADPTSMFPESTNVDIEgistdilnvALKRSFTTYLP.DTVVPMLPQSICHLSDLGKQGQRTKTISFSVDVKITSKCSgksieiMYDSFKIRKGIVSN..FPKATYEDVDRILGTP.----NSE-.............---.-.--ASPVKKDLES........LSMISKLLREQRIKNSNAVIFGEGFNKGLVMLN.........AdSEGELTEVTFSDQEETLSTILVSEMMILANTLTGRYFAENKIGG-....VFRCYKQLPLGEVAQQQYDSMITSTKKG-----............----IFPKLKDIVKLSSLLNSSFYTGRPFRHEMIGAKQYL
SSD1_YEAST/607-972 ENADKYSEKLFVASIK.--RWPITSLHPFG......ILVSELGDIHDPDTEIDSILRDNNFLSNEYLDQKNP------.QKEkPsFQPLPLTAESLEYRRNFTDTNEYNIFAISELGW-.....................VSEFALHVRNNGNGT.-...-LELGCHVVDVTSHIEEGSSVDRR.........ARKRSSAVFMP.QKLVNLLPQSFN-DELSLAPGKESATLSVVYTLDSSTL--......RIKSTWVGESTISP..SNILSLEQLDEKLS--.--------.............---.-.-TGSP-TSYLST........VQEIARSFYARRINDPEATLLPTLSLLESLDD-.........-.EKVKVDLN---ILDRTLGFVVINEIKRKVNSTVAEKIYTKLGDLA....LLRRQMQPIATKMASFRKKIQ-NFGYNFDTN--............----TADELIKGVLKIKDDDVRVGIEILLFKTMPRARYFI
O13327_CANAL/588-959 ENHEKYADRLFVASIK.--RWPITSLHPFG......TLVSNLGPIDSPETEIDSILRDNNFLCDEYPDDDND------.DIVsVnAYDLPSIEPEFENTQREEYLNDY-IIAFTQNGE-.....................FVDHALHVKRISNTK.-...-IELGFHVADIAYFIKPGSSLDRK.........SKKRSSSVFLP.QKTVNLFPKQVN-KIVSFKENEKNLAVSVVFEIDTSNF--......EVEDLYIHESVIIP..KQLVTYDAFDTILSG-.QS--VDS-.............---.-.-ISSATSDYVKT........FSLIAKEFRRHRLSNRSLGITPNLTLLDQLDD-.........-.EKVRLDLN---IFKDSLAFDVISEISHKVNSAIAAKVHAGLGDQA....ILRRHPLPTLQKMETFVRKAT-SLGFKIDTT--............----TSSTLQNSILKIDDPVKRKCVETLLYKCMSRGRYYV
STS5_SCHPO/507-887 GNDQAYAQRLFLASIK.--RWPVTSLHPFG......MLVGELGSMDSMSAQVSALLHDTGVHSEPWEGSAAT-SAVTA.---.-.---LNALSDNFLNVAGCADYRSEDVFLFVKNDVSkaavsevkqhesninsssatdFVSSAFHIRPTSTG-.-...-YHVGIHVTDVSRVIEPGSPLDRE.........LQRRSIAVNLC.QKSVPLFPTTLG-EALSLREDKDCYTMSLLLDVSSTG---......KIRGTWIGWAVIRP..RKAYTMKEADELLQT-.DARLRLF-.............---.-.--H-TVSSRLRThhlgtdvpLSRYCRLVRRWDEESC--SFDPNETNLFISSA-.........-.--VEVLRE-----TLLDA----------ANRAVASHLRQEFRENA....FLRTQRLPSRENCRILQSMAIQMGCVLD-----............-LSST-KSLLRSLSLIEDDTVRNILQLYYYKVTPRAVYEM
O94525_SCHPO/526-875 TNNDDFKDKVFLAGIK.--RWPTTSLHPFG......TLYESIGTIGDPKVEYKAILHDFSCHTYDFPESLSHCVKRLP.---.-.------TPIPAEELQKRYNLRDKLTFMIGTRDY-.....................----ALHIDTGSIDG.-...VITLGIHVADVAYYVKQDMPLDDE.........AANRVSEVQLL.QGSVPFLPKKVS-EEISLIEGHDCLTISIVVQLDLKSG--......AVLQCSLGPSVIHP..SSFISLESAQANLQT-.--------.............---.-.------NEALQL........VDASAHVLTKLRLKTDKKLDLQSLYCFEFCDG-.........-.QIPNIQNINMSIFEAFPIACSLQQIEHWVNEKVASHLMSVFPSKV....ILRKNQRPSDFASLVAVSELTGVNLSASS----............----TPSEIMTEIATTKDKRTKMLLQLTLRRMCN------
CYT4_NEUCR/478-918 SSKYQWIGAAVLRALG.RYQDADVLDATVG.....wTFLQEIGWLMPWEIHARHSLRLPGLQVNRAGGLLPSPEEQQP.---.-.-----AELDEDVLAPLRQDFYTSTVYCIDAPNAK.....................EIDDGVSLEKTDKEG.-...EYWIHVHIADPTSRIRPDSSLAKR.........AALMTQTSYLP.GHVDKMISDEAVVAEFSLAPGRPSLTFSARLNEEGTLLDH......KVTPGRIGDVVYITpqDVATAVGPVDAGIPKVsTPDVVLEVgtppsaedeaptrKMTkPdELSEQNVKDLEI........LSRLAAAIHKVRIQKGSVPIFLPSPSADFSLVNariehtpsgFlACTNDPYISVKYSVSGGLHPIVDDLMGTANQIAALWCYERGIPIPfrtnLLAAQNEEALRAYTQDVIYPQLIAGKQPSLEEMrtlrnllgghdiAATPTFIYTMGVDIYTKATSPLRRYSDLLVHWQIQAALLE
O83783_TREPA/215-567 --EHREQAHEILLHFG.--FWP--------......-----VYRNPYPDRLCPLFLSPAHVSGSDGERAAQQDVHTHR.---.-.----------CVT-QARTDCTHLAAYAIDGEGTR.....................DPDDAISFDGTYF--.-...----WIHVASPAELVLPDSHADAC.........ARTRGRSLYLP.EGAVRMLSDVVV-DTCALARDAVSPALSFKILLDEHG---......DISCVHVLRSMVR-..VTRLSYAEADSQRDTPaLQPLFDFA.............RN-.-.-NIARRKGRGAV........DICFPDVHMRVDFPVQETGQAGKEMNAGDVPD-.........-.TQGKVPRVHIEAQQSYESMSMVREFMLLAGEAAARFAFLHNLAFP....YVSQERPQLPVQLPAGLAGEYKKRRAMKAR---............-RVSTTAAVHAALGLSQYSQVTSPLRRYVDLLAHQQLLA-