EMBL-EBI > Goldman Group

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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00730 - HhH-GPD)
HhH-GPD superfamily base excision DNA repair protein
(Pfam reference: accession no. PF00730)
(Interpro reference: accession no. IPR003265)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
74 sequences @ 235 aa
(ave. pairwise identity: 0.21)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 54.68)
nucleotides
(available for above)
73 sequences @ 705 bp
(ave. pairwise identity: 0.35)
New Hampshire format
(total tree length: 39.76)
amino acids, restricted set
(corresp. to available nt seqs)
73 sequences @ 235 aa
(ave. pairwise identity: 0.21)
New Hampshire format
(total tree length: 54.63)