EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00702 - Hydrolase)
haloacid dehalogenase-like hydrolase
(Pfam reference: accession no. PF00702)
(Interpro reference: accession no. IPR005834)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
247 sequences @ 487 aa
(ave. pairwise identity: 0.17)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 231.07)
nucleotides
(available for above)
234 sequences @ 1461 bp
(ave. pairwise identity: 0.33)
New Hampshire format
(total tree length: 138.62)
amino acids, restricted set
(corresp. to available nt seqs)
234 sequences @ 487 aa
(ave. pairwise identity: 0.17)
New Hampshire format
(total tree length: 220.82)