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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00690 phylogeny
for nucleotide alignment


 
((((((((((((((((Q9UUX8_NEUCR/71-151,((Q9N323_CAEEL/159-235,ATA1_SYNY3/2-85),(((Q988T1_RHILO/32-113,(Q9P8N3_ASPNG/31-115,Q9UUX9_NEUCR/48-131)),((CTPF_MYCTU/1-89,((O43134_BLAEM/6-96,Q9I3R5_PSEAE/1-89),(O26581_METTH/8-85,((ATMB_SALTY/22-103,Q9HUY5_PSEAE/13-98),Q9LIV9_ORYSA/12-96)))),Q48415_KLEPN/12-89)),O27560_METTH/1-80))),((((AT2C1_BOVIN/56-133,Q9XTG4_CAEEL/3-83),Q9VNR2_DROME/4-81),O60948_TRYCR/60-141),(ATC1_YARLI/19-102,(ATC1_SCHPO/1-79,((O94117_PICAN/24-109,Q9P872_CANAL/14-96),(O74296_KLULA/22-108,ATC1_YEAST/27-113)))))),O27082_METTH/1-78),(((Q9GV97_TOXGO/5-86,((((((AT1A1_CATCO/36-119,Q9DEY3_BRARE/34-117),(Q98SL3_ELEEL/19-102,((AT1A4_MOUSE/42-125,AT1A2_HUMAN/31-114),(AT1A3_CHICK/20-103,AT1A1_BUFMA/33-116)))),((AT12A_RAT/46-129,AT12A_BUFMA/52-134),(ATP4A_RAT/41-124,ATP4A_XENLA/39-122))),((((Q9U458_DROME/22-105,(P90735_CAEEL/11-94,((AT1A_HYDAT/39-122,O76154_DUGJA/32-115),AT1A_ARTSF/10-92))),Q9GPG2_CALSI/49-132),ATNA_DROME/51-134),O45240_CAEEL/49-132)),(Q9W248_DROME/34-119,((ATMA_SALTY/43-118,ATMA_ECOLI/41-114),((O16436_CAEEL/29-120,O16331_CAEEL/31-120),Q95024_DICDI/2-88)))),Q9SXK5_9STRA/18-100)),(O15637_TRYCR/32-110,Q9FNS3_CHLRE/4-72)),((O61136_LEIDO/17-101,(O93862_EMENI/75-152,(PMA1_AJECA/61-141,(PMA1_NEUCR/61-145,(O94195_PICAN/42-124,((PMA1_SCHPO/59-143,PMA2_SCHPO/147-231),((PMA1_CANAL/38-122,(PMA2_YEAST/86-174,PMA1_KLULA/41-126)),Q01680_PNECA/18-102))))))),(((Y1226_METJA/1-75,PMA1_DICDI/154-241),Q9HJC5_THEAC/1-74),((O74242_CRYNE/71-152,O14437_UROFA/41-122),(((Q9SWH2_NICPL/11-92,PMA8_ARATH/8-89),(((((PMA10_ARATH/14-94,Q9SWH0_NICPL/13-94),PMAX_ARATH/8-91),P93265_MESCR/11-92),PMA1_ARATH/4-85),((PMA1_LYCES/10-90,PMA7_ARATH/9-89),Q9SWH1_NICPL/11-92))),((PMA1_DUNAC/26-109,PMA1_DUNBI/26-105),O04956_CYACA/44-123))))))),(((ATN5_YEAST/8-90,P78981_ZYGRO/5-85),((O13397_DEBOC/17-104,O13398_DEBOC/23-111),Q9C1R0_DEBHA/35-122)),(ATC3_SCHPO/4-80,Q9UUX7_NEUCR/17-97))),((Q97PQ2_STRPN/20-98,Q9A0T9_STRPY/1-82),((Q9K9X9_BACHD/9-76,O34431_BACSU/4-76),Q97H76_CLOAB/1-64))),Q9CFU9_LACLA/2-75),(ATCY_SCHPO/133-218,(((P74062_SYNY3/9-89,ATCL_SYNP7/11-92),Q59999_SYNY3/16-98),P73273_SYNY3/11-89))),((O96527_SCHMA/3-77,(ATC_ARTSF/4-77,(O96039_PATYE/1-76,(O96696_HELVI/3-77,((Q27779_SCHMA/4-78,(((O04938_ORYSA/1-76,(((AT2A1_MAKNI/3-77,Q9DDB8_RANSY/3-77),(AT2A1_CHICK/2-77,AT2A1_HUMAN/1-77)),((AT2A3_CHICK/1-77,AT2A3_HUMAN/2-77),AT2A2_CANFA/3-77))),ATC1_DROME/2-77),O17315_PROCL/1-76)),((ECA3_ARATH/3-77,(ATC1_DUNBI/18-100,(O09489_LEIAM/21-96,(O96608_TRYCR/2-83,ATC_TRYBB/4-83)))),(Q9XU13_CAEEL/3-76,Q9UUY0_NEUCR/3-77))))))),((O76974_PARTE/4-83,(ATC_PLAFK/3-81,Q27764_9APIC/3-81)),(ECA4_ARATH/16-98,(ECA2_ARATH/1-81,Q42883_LYCES/1-81))))),Q9CHP9_LACLA/2-76),(Q95060_TRIVA/1-77,((((Q97JK5_CLOAB/1-75,Q9PQM7_UREPA/1-68),Q9CDH2_LACLA/1-80),Q98R55_MYCPU/1-73),Q27642_ENTHI/37-119))),((ATC1_DICDI/30-116,Q27721_PLAFA/108-193),Q95022_CRYPV/205-287)),Q9CG53_LACLA/21-106),((O76833_CAEEL/24-103,O76832_CAEEL/20-104),((AT2B1_HUMAN/44-123,(((AT2B2_HUMAN/43-120,AT2B3_HUMAN/44-123),AT2B2_OREMO/42-120),AT2B4_HUMAN/39-121)),Q9V4C7_DROME/31-106))),Q9FVE8_SOYBN/108-189),ACA4_ARATH/103-183,ACA11_ARATH/106-183);
((((((((((((((((Q9UUX8_NEUCR/71-151:0.53441,((Q9N323_CAEEL/159-235:0.77004,ATA1_SYNY3/2-85:0.40744):0.25614,(((Q988T1_RHILO/32-113:0.62899,(Q9P8N3_ASPNG/31-115:0.30681,Q9UUX9_NEUCR/48-131:0.36092):0.12856):0.05774,((CTPF_MYCTU/1-89:0.49302,((O43134_BLAEM/6-96:0.40525,Q9I3R5_PSEAE/1-89:0.36518):0.10554,(O26581_METTH/8-85:0.63373,((ATMB_SALTY/22-103:0.40924,Q9HUY5_PSEAE/13-98:0.36076):0.18720,Q9LIV9_ORYSA/12-96:0.46430):0.06125):0.02948):0.04606):0.05088,Q48415_KLEPN/12-89:0.44099):0.05929):0.08753,O27560_METTH/1-80:0.53009):0.08126):0.05714):0.04724,((((AT2C1_BOVIN/56-133:0.38379,Q9XTG4_CAEEL/3-83:0.35880):0.17127,Q9VNR2_DROME/4-81:0.37437):0.16999,O60948_TRYCR/60-141:0.47663):0.17554,(ATC1_YARLI/19-102:0.32357,(ATC1_SCHPO/1-79:0.66780,((O94117_PICAN/24-109:0.39378,Q9P872_CANAL/14-96:0.38203):0.10246,(O74296_KLULA/22-108:0.31562,ATC1_YEAST/27-113:0.29830):0.11341):0.15717):0.06440):0.07648):0.07931):0.11301,O27082_METTH/1-78:0.42117):0.04449,(((Q9GV97_TOXGO/5-86:0.65987,((((((AT1A1_CATCO/36-119:0.12918,Q9DEY3_BRARE/34-117:0.18348):0.03683,(Q98SL3_ELEEL/19-102:0.18564,((AT1A4_MOUSE/42-125:0.24630,AT1A2_HUMAN/31-114:0.07711):0.05369,(AT1A3_CHICK/20-103:0.16952,AT1A1_BUFMA/33-116:0.13901):0.04730):0.05990):0.03817):0.07212,((AT12A_RAT/46-129:0.18624,AT12A_BUFMA/52-134:0.14336):0.12451,(ATP4A_RAT/41-124:0.19649,ATP4A_XENLA/39-122:0.16081):0.27678):0.06676):0.11390,((((Q9U458_DROME/22-105:0.41425,(P90735_CAEEL/11-94:0.33213,((AT1A_HYDAT/39-122:0.34891,O76154_DUGJA/32-115:0.20267):0.06807,AT1A_ARTSF/10-92:0.22085):0.05090):0.07700):0.02355,Q9GPG2_CALSI/49-132:0.21740):0.05238,ATNA_DROME/51-134:0.17159):0.07644,O45240_CAEEL/49-132:0.48471):0.04808):0.09269,(Q9W248_DROME/34-119:0.68572,((ATMA_SALTY/43-118:0.31775,ATMA_ECOLI/41-114:0.17838):0.40695,((O16436_CAEEL/29-120:0.21156,O16331_CAEEL/31-120:0.23864):0.33615,Q95024_DICDI/2-88:0.50984):0.18879):0.04468):0.11039):0.05173,Q9SXK5_9STRA/18-100:0.43395):0.12894):0.10843,(O15637_TRYCR/32-110:0.29264,Q9FNS3_CHLRE/4-72:0.43603):0.19965):0.06996,((O61136_LEIDO/17-101:0.80769,(O93862_EMENI/75-152:0.36065,(PMA1_AJECA/61-141:0.19265,(PMA1_NEUCR/61-145:0.13021,(O94195_PICAN/42-124:0.13501,((PMA1_SCHPO/59-143:0.15723,PMA2_SCHPO/147-231:0.29636):0.11213,((PMA1_CANAL/38-122:0.14280,(PMA2_YEAST/86-174:0.28401,PMA1_KLULA/41-126:0.08146):0.05438):0.04706,Q01680_PNECA/18-102:0.37521):0.07759):0.10199):0.11203):0.04368):0.08749):0.06399):0.20085,(((Y1226_METJA/1-75:0.30433,PMA1_DICDI/154-241:0.46924):0.16036,Q9HJC5_THEAC/1-74:0.41577):0.20570,((O74242_CRYNE/71-152:0.27082,O14437_UROFA/41-122:0.24649):0.13902,(((Q9SWH2_NICPL/11-92:0.20717,PMA8_ARATH/8-89:0.13521):0.06358,(((((PMA10_ARATH/14-94:0.27291,Q9SWH0_NICPL/13-94:0.17491):0.09650,PMAX_ARATH/8-91:0.27915):0.04730,P93265_MESCR/11-92:0.16286):0.04324,PMA1_ARATH/4-85:0.10955):0.03781,((PMA1_LYCES/10-90:0.18909,PMA7_ARATH/9-89:0.16601):0.05844,Q9SWH1_NICPL/11-92:0.14337):0.07574):0.04654):0.09711,((PMA1_DUNAC/26-109:0.06901,PMA1_DUNBI/26-105:0.25302):0.26213,O04956_CYACA/44-123:0.44000):0.04950):0.04391):0.16753):0.07898):0.10590):0.14628):0.10431,(((ATN5_YEAST/8-90:0.24030,P78981_ZYGRO/5-85:0.34866):0.28672,((O13397_DEBOC/17-104:0.25280,O13398_DEBOC/23-111:0.29957):0.09174,Q9C1R0_DEBHA/35-122:0.26341):0.23575):0.05428,(ATC3_SCHPO/4-80:0.40932,Q9UUX7_NEUCR/17-97:0.37907):0.12212):0.15862):0.06580,((Q97PQ2_STRPN/20-98:0.25065,Q9A0T9_STRPY/1-82:0.38329):0.16787,((Q9K9X9_BACHD/9-76:0.33984,O34431_BACSU/4-76:0.27962):0.11423,Q97H76_CLOAB/1-64:0.36904):0.09713):0.09985):0.06437,Q9CFU9_LACLA/2-75:0.42542):0.05386,(ATCY_SCHPO/133-218:0.85206,(((P74062_SYNY3/9-89:0.45712,ATCL_SYNP7/11-92:0.30444):0.16307,Q59999_SYNY3/16-98:0.35916):0.12755,P73273_SYNY3/11-89:0.52610):0.07559):0.18164):0.07981,((O96527_SCHMA/3-77:0.27308,(ATC_ARTSF/4-77:0.28050,(O96039_PATYE/1-76:0.23800,(O96696_HELVI/3-77:0.19987,((Q27779_SCHMA/4-78:0.36470,(((O04938_ORYSA/1-76:0.47055,(((AT2A1_MAKNI/3-77:0.12201,Q9DDB8_RANSY/3-77:0.16178):0.10257,(AT2A1_CHICK/2-77:0.23649,AT2A1_HUMAN/1-77:0.13918):0.02700):0.05907,((AT2A3_CHICK/1-77:0.14155,AT2A3_HUMAN/2-77:0.22746):0.07156,AT2A2_CANFA/3-77:0.28352):0.03083):0.08371):0.06409,ATC1_DROME/2-77:0.22796):0.08220,O17315_PROCL/1-76:0.26958):0.07139):0.07420,((ECA3_ARATH/3-77:0.28179,(ATC1_DUNBI/18-100:0.36343,(O09489_LEIAM/21-96:0.42858,(O96608_TRYCR/2-83:0.31365,ATC_TRYBB/4-83:0.22586):0.10407):0.21111):0.12607):0.10808,(Q9XU13_CAEEL/3-76:0.28692,Q9UUY0_NEUCR/3-77:0.36919):0.08331):0.07866):0.07502):0.05633):0.05918):0.04699):0.08859,((O76974_PARTE/4-83:0.38054,(ATC_PLAFK/3-81:0.12643,Q27764_9APIC/3-81:0.25989):0.19717):0.09567,(ECA4_ARATH/16-98:0.36835,(ECA2_ARATH/1-81:0.27784,Q42883_LYCES/1-81:0.16863):0.16866):0.13770):0.08444):0.08911):0.09433,Q9CHP9_LACLA/2-76:0.45516):0.03577,(Q95060_TRIVA/1-77:0.54257,((((Q97JK5_CLOAB/1-75:0.61693,Q9PQM7_UREPA/1-68:0.23235):0.11471,Q9CDH2_LACLA/1-80:0.47716):0.06853,Q98R55_MYCPU/1-73:0.45908):0.06604,Q27642_ENTHI/37-119:0.50258):0.03749):0.05440):0.12859,((ATC1_DICDI/30-116:0.56306,Q27721_PLAFA/108-193:0.33648):0.06035,Q95022_CRYPV/205-287:0.56758):0.08740):0.05943,Q9CG53_LACLA/21-106:0.44004):0.25080,((O76833_CAEEL/24-103:0.31896,O76832_CAEEL/20-104:0.28283):0.15158,((AT2B1_HUMAN/44-123:0.17267,(((AT2B2_HUMAN/43-120:0.16881,AT2B3_HUMAN/44-123:0.17233):0.23508,AT2B2_OREMO/42-120:0.17238):0.11219,AT2B4_HUMAN/39-121:0.22929):0.14914):0.13215,Q9V4C7_DROME/31-106:0.31938):0.06784):0.12143):0.21241,Q9FVE8_SOYBN/108-189:0.35362):0.23450,ACA4_ARATH/103-183:0.12003,ACA11_ARATH/106-183:0.11230);