EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00683 alignment
(34 sequences with 159 bp)


LTBP1_RAT/1525-1567 TACGTGTGTAGCCGTCCTCTTGTAGGCAAG...CAGACGACATACACAGAG...TGCTGCTGTTTGTACGGGGAG------......GCATGGGGCATGCAG...TGTGCT......CTCTGCCCCATGAAGGAC...TCAGATGACTATGCCCAGCTG
LTB1S_HUMAN/1207-1249 TACGTGTGTAGCCGGCCTCTTGTGGGCAAG...CAGACAACGTACACTGAG...TGCTGCTGTCTGTATGGAGAG------......GCCTGGGGCATGCAG...TGTGCC......CTCTGCCCCCTGAAGGAT...TCAGATGACTATGCTCAGCTG
FBN2_HUMAN/712-754 GGAGTGTGTGTGCGTCCTTTCCCCGGT---...GCAGTGACCAAGTCCGAA...TGCTGCTGTGCCAATCCAGACTAT---......GGTTTTGGAGAACCC...TGCCAG......CCATGCCCTGCAAAAAAT...TCAGCTGAATTCCACGGCCTT
FBN1_HUMAN/668-710 GGCCAGTGTATCAAACCTTTGTTTGGT---...GCTGTCACTAAATCTGAA...TGCTGTTGCGCCAGCACTGAGTAT---......GCATTTGGGGAACCT...TGCCAG......CCGTGTCCTGCACAGAAT...TCAGCGGAATATCAGGCACTC
FBN1_BOVIN/668-710 GGCCAGTGTGTCAAACCCTTGTTTGGT---...GCTGTTACCAAGTCTGAA...TGCTGTTGTGCCAGCACTGAGTAT---......GCTTTCGGGGAACCT...TGCCAA......CCATGTCCTTCACAGAAT...TCAGCGGAGTATCAGGCGCTC
FBN2_HUMAN/1590-1631 CTGTCTTGCAACACCGAGATCGGGGTGGGC...---GTCAGTCGCTCTTCA...TGCTGCTGCTCTCTGGGAAAG------......GCCTGGGGAAACCCC...TGTGAG......ACATGCCCCCCTGTCAAT...AGCACTGAATATTACACCCTG
FBN1_HUMAN/1547-1588 ACAGCCTGCAGCAATGAAATTGGAGTTGGT...---GTTTCCAAAGCTTCC...TGCTGCTGTTCTCTGGGTAAA------......GCCTGGGGTACTCCT...TGTGAG......ATGTGTCCTGCTGTGAAC...ACATCCGAGTACAAAATTCTT
FBN1_BOVIN/1547-1588 ACAGCCTGCAGCAATGAAATTGGGGTTGGA...---GTGTCCAAGGCTTCT...TGCTGCTGCTCTCTGGGTAAA------......GCCTGGGGCACTCCT...TGTGAG......CTGTGCCCGCCTGTGAAC...ACATCTGAGTACAAAATTCTT
FBN2_HUMAN/1009-1050 GATGAATGCATCCACCCCGTTCCTGGAAAG...---TTCCGCATGGATGCC...TGCTGCTGTGCTGTCGGGGCG------......GCTTGGGGCACCGAG...TGTGAG......GAGTGCCCCAAACCTGGC...ACCAAGGAATACGAGACACTG
FBN1_HUMAN/965-1007 GAGGAGTGCACCCTGCCTATTGCTGGCCGC...---CACCGCATGGACGCC...TGCTGCTGCTCCGTCGGGGCA------......GCCTGGGGTACTGAGgaaTGCGAG......GAGTGTCCCATGAGAAAT...ACTCCTGAGTACGAGGAGCTG
FBN1_BOVIN/965-1007 GAGGAGTGCACCCTGCCCGTGGCTGGGCGC...---CACCGCATGGACGCC...TGCTGCTGCTCAGTCGGGGCA------......GCCTGGGGCACCGAGgagTGTGAG......GAGTGTCCCGTGAGAAAC...ACACCTGAGTACGAGGAGCTC
LTBP1_RAT/1348-1391 AGTCTCTGTGATAACGTGCTGGCCCCCAAC...---GTCACCAAACAAGAG...TGCTGCTGTACATCGGGCGCC------......GGCTGGGGAGACAAT...TGTGAGatcttcCCTTGCCCAGTCCAGGGG...ACTGCTGAGTTCTCGGAAATG
LTB1S_HUMAN/1030-1073 AGTCTCTGTGATAATGTGTTGGCCCCCAAT...---GTCACGAAACAAGAA...TGCTGCTGTACATCAGGCGCG------......GGATGGGGAGATAAC...TGCGAAatcttcCCCTGCCCGGTCTTGGGA...ACTGCTGAGTTCACTGAAATG
LTBP1_RAT/679-720 AGGCAGTGTATGCACCCTCTCTCTGTTCAC...---CTCACCAAGCAGATC...TGCTGTTGTAGTGTGGGCAAG------......GCCTGGGGCCCACAG...TGTGAG......AAATGTCCCCTCCCGGGC...ACAGCTGCTTTTAAGGAAATC
LTB1S_HUMAN/361-401 AGACAGTGTATGTACCCTCTGTCTGTTCAC...---CTCACCAAGCAGCTC...TGCTGTTGTAGTGTGGGCAAG------......---GCTGGGCCACAC...TGTGAG......AAATGTCCCCTTCCAGGC...ACAGCTGCTTTTAAGGAAATC
FBN2_HUMAN/2392-2435 ACAATATGTCAAATGGCATCCAGTAGTCGCaatCTCGTCACTAAGTCAGAA...TGCTGCTGTGATGGTGGGCGA------......GGCTGGGGCCACCAG...TGCGAG......CTTTGCCCACTTCCTGGA...ACTGCCCAGTACAAAAAGATA
FBN1_BOVIN/2346-2389 AACATGTGTCAGATCGGCTCAAGCAACAGGaacCCCGTCACTAAGTCTGAA...TGCTGCTGCGATGGAGGGAGA------......GGCTGGGGGCCCCAC...TGTGAG......ATCTGCCCTTTCCAGGGG...ACTGTGGCTTTCAAAAAACTC
FBN1_HUMAN/2346-2389 AACATGTGTCAGATCGGCTCCAGCAACAGGaacCCCGTCACCAAATCGGAA...TGCTGCTGTGACGGAGGGAGA------......GGCTGGGGTCCCCAC...TGTGAG......ATCTGCCCTTTCCAGGGG...ACTGTGGCTTTCAAGAAACTC
FBN2_HUMAN/1746-1789 ACCACTTGTGAGAATGAGTTGCCTTTCAAT...---GTGACAAAAAGGATG...TGCTGCTGCACATATAATGTGGGCAAA......GCTGGGAACAAACCT...TGTGAA......CCATGCCCAACTCCAGGA...ACAGCTGACTTTAAAACCATA
FBN1_BOVIN/1704-1747 CAGACCTGCGATGGAGAACTGTTGTTCAAC...---ATGACCAAGAAGATG...TGCTGTTGTTCCTACAACATTGGCCGG......GCCTGGAACAAGCCC...TGTGAA......CAGTGCCCCATTCCAAGC...ACAGATGAATTTGCTACACTC
FBN1_HUMAN/1704-1747 CAGACCTGTGATGGAGAATTGTTATTCAAC...---ATGACCAAGAAGATG...TGCTGCTGTTCCTACAACATTGGCCGG......GCGTGGAACAAGCCC...TGTGAA......CAGTGTCCCATCCCAAGT...ACAGATGAGTTTGCTACACTC
FBN2_HUMAN/2110-2153 GGAAAGTGTTCTGTACCCAAAGCTTTC---...AACACCACAAAAGCAAAA...TGCTGCTGTAGTAAGATGCCAGGAGAG......GGCTGGGGGGACCCC...TGTGAG......CTGTGCCCCAAAGACGAT...GAAGTTGCATTTCAGGATTTG
FBN1_BOVIN/2068-2110 GGAAAGTGTTCATCACCCAAATCCAGA---...AATCACTCCAAACAGGAA...TGCTGCTGTGCCTTGAAG---GGAGAA......GGTTGGGGAGATCCC...TGCGAG......CTGTGCCCCACTGAACCC...GATGAGGCCTTCCGCCAGATC
FBN1_HUMAN/2068-2110 GGAAAGTGTTCATCACCCAAATCCAGA---...AATCACTCCAAGCAGGAA...TGCTGCTGTGCCTTGAAG---GGAGAA......GGCTGGGGAGACCCC...TGCGAG......CTCTGCCCCACGGAACCT...GATGAGGCCTTCCGCCAGATA
LTB1S_HUMAN/240-283 TCACAGTGTGGCAAAGCGCTCCCTGGC---...---CTTTCAAAGCAAGAGgacTGCTGTGGAACTGTGGGTACC------......TCCTGGGGCTTTAACaaaTGCCAG......AAATGCCCCAAGAAACCAtctTATCATGGATACAACCAAATG
FBN2_HUMAN/222-264 CAGATGTGCCAAGGGCAGCTGACAGGCATT...GTCTGCACGAAGACTCTG...TGCTGTGCCACCACTGGACGG------......GCGTGGGGCCATCCC...TGTGAG......ATGTGTCCAGCCCAGCCT...CAGCCCTGCCGACGGGGTTTC
FBN1_HUMAN/193-235 CAGATGTGCCAGGGACAACTCAGCGGGATT...GTCTGCACAAAACAGCTC...TGCTGTGCCACAGTCGGCCGA------......GCCTGGGGCCACCCC...TGTGAG......ATGTGTCCTGCCCAGCCT...CACCCCTGCCGCCGTGGCTTC
FBN1_BOVIN/193-235 CAGATGTGCCAGGGACAGCTCAGCGGGATT...GTCTGCACGAAAACGCTC...TGCTGTGCCACGGTCGGCCGT------......GCCTGGGGCCACCCC...TGTGAG......ATGTGTCCCGCCCAGCCC...CACCCCTGTCGCCGCGGCTTC
FBN2_HUMAN/372-415 GGCCGCTGTGCACAAGAGCTCCCGGGGAGA...---ATGACGAAAATGCAG...TGCTGCTGTGAGCCTGGCCGCTGCTGG......GGCATCGGAACCATT...CCTGAA......GCCTGTCCTGTCAGAGGT...TCTGAGGAATATCGCAGACTT
FBN1_BOVIN/343-388 GGGCGCTGTTCTAACCAGCTGCCACAGTCC...---ATCACCAAGATGCAG...TGCTGCTGTGATGCCGGCCGGTGCTGGtctccgGGGGTCACGGTCGCC...CCCGAG......ATGTGTCCCATCAGAGCA...ACTGAGGATTTCAACAAGCTG
FBN1_HUMAN/343-388 GGGCGCTGCTCTAACCAGCTGCCACAGTCC...---ATAACCAAAATGCAG...TGCTGCTGTGATGCCGGCCGATGCTGGtctccaGGGGTCACTGTCGCC...CCTGAG......ATGTGTCCCATCAGAGCA...ACCGAGGATTTCAACAAGCTG
FBN2_HUMAN/904-944 AGCCGCTGTGAGGTGAATATTAATGGAGCC...---ACTCTGAAATCTGAA...TGCTGTGCCACCCTCGGAGCC------......GCCTGGGGGAGCCCC...TGTGAG......CGGTGTGAACTAGATACA...GCTTGCCCAAGAGGGCTT---
FBN1_HUMAN/860-901 GGGCGATGTGAGATCAACATCAATGGAGCC...---ACCTTAAAGTCCCAG...TGCTGCTCCTCCCTCGGTGCT------......GCGTGGGGAAGCCCG...TGCACC......CTATGCCAAGTTGATCCC...ATATGTGGTAAAGGGTACTCA
FBN1_BOVIN/860-901 GGGCGGTGTGAGATCAACATCAATGGAGCC...---ACATTGAAGTCCCAG...TGCTGTTCATCCCTTGGTGCT------......GCCTGGGGGAGCCCA...TGCACC......CCATGCCAAGTCGATCCC...ATATGTGGGAAAGGCTATTCA