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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00656 phylogeny
for amino acid alignment


 
((((((((((((((((Q53839_STRCO/9-268,(Q7WDK3_BORBR/552-800,Q87Z21_PSESM/2-225)),((((((Q9SA41_ARATH/3-378,(O64520_ARATH/3-386,((O64518_ARATH/3-408,O64519_ARATH/3-366),((Q70VV0_PICAB/3-415,Q9ZSP8_HEVBR/3-415),O64517_ARATH/3-416)))),Q8LCR8_ARATH/5-316),(((((Q6BH13_DEBHA/146-437,(O74477_SCHPO/130-422,((Q6CLS0_KLULA/161-453,(Q08601_YEAST/157-450,Q6FPX9_CANGA/98-389)),Q75B43_ASHGO/154-449))),Q6C2Y6_YARLI/168-458),((O81911_ARATH/80-386,Q7XC24_ORYSA/76-374),Q7XJE5_ARATH/116-414)),Q7RFI8_PLAYO/964-1364),((Q8IEW1_9TRYP/63-322,Q8T8E6_9TRYP/84-343),Q8T8E8_9TRYP/84-341))),Q74F93_GEOSL/6-270),Q82I86_STRAW/5-276),Q7NPG1_GLOVI/7-278)),P74453_SYNY3/40-299),Q8YS65_ANASP/4-245),(Q9GPM2_DICDI/188-405,Q86JK1_DICDI/22-316)),(Q19719_CAEEL/252-476,(Q8BFT0_MOUSE/340-577,Q9DDL2_BRARE/323-560))),(((Q6NBN5_RHOPA/57-277,Q89XE4_BRAJA/58-278),(Q6N0T4_RHOPA/30-251,Q89XG2_BRAJA/27-248)),(Q98JS7_RHILO/35-253,(Q98CE0_RHILO/5-238,((((Q6N5Q1_RHOPA/33-253,Q89KP2_BRAJA/86-307),Q985X8_RHILO/35-256),((Q6N329_RHOPA/73-298,Q89FZ4_BRAJA/32-256),Q89HT8_BRAJA/51-272)),((Q98IJ6_RHILO/11-238,(Q98G71_RHILO/26-252,((Q89HP3_BRAJA/336-569,Q98IJ9_RHILO/30-261),Q89IK1_BRAJA/30-253))),(Q6AKF4_DESPS/28-248,Q89MV1_BRAJA/176-400))))))),(Q7QGM9_ANOGA/4-212,(Q9NBW3_DROME/38-248,Q9V9J6_DROME/313-523))),ICENC_DROME/196-443),((((O18203_CAEEL/293-532,Q9TZP5_CAEEL/26-261),(CED3_CAEEL/243-494,Q9Y1U6_PRIPA/173-413)),(Q9GV89_HYDAT/93-318,Q8I749_SUBDO/254-491)),((O55194_RAT/200-445,CASP2_CHICK/171-416),((CASPE_MOUSE/22-256,CASPE_HUMAN/18-241),((Q9DDJ2_BRARE/174-400,Q9I9L7_BRARE/145-379),((O42284_CHICK/42-279,(((CASPC_MOUSE/176-415,(CASP1_FELCA/161-406,((CASPD_BOVIN/136-373,CASP5_HUMAN/177-414),CASP1_CANFA/163-400))),CASP4_MOUSE/132-369),(CASP1_MOUSE/162-398,(CASP1_HUMAN/163-400,CASP1_PIG/163-400)))),CAS1A_XENLA/144-382)))))),((((Q8ITP3_BRAFL/87-323,(Q8ITP2_BRAFL/151-396,(((CASP6_MOUSE/28-270,O93415_CHICK/57-299),Q9I8S9_ONCMY/57-297),Q9IB66_XENLA/58-298))),((O88550_RAT/68-301,Q6DCI2_XENLA/78-314),(Q9GV88_HYDAT/84-316,((Q8JG42_FUGRU/51-279,Q98UI8_BRARE/48-280),(Q8JIS8_ORYLA/58-285,(O93417_CHICK/53-281,CASP3_XENLA/56-280)))))),(((((Q7PZJ9_ANOGA/20-250,Q7QKT2_ANOGA/35-260),Q9NHF9_DROME/56-302),(Q7PV92_ANOGA/18-255,Q86FL0_ANOST/52-286)),Q7Q803_ANOGA/54-306),(Q7Q1E0_ANOGA/53-282,((CASP1_SPOFR/61-293,(ICE_DROME/94-328,CASP1_DROME/79-313)),Q7Q4X6_ANOGA/73-309)))),(((CASP9_HUMAN/161-413,Q90WU0_CHICK/148-400),Q9IB63_XENLA/144-396),Q8I6Y2_GEOCY/158-414))),(Q6E5N8_ICTPU/119-362,((Q6PAD9_XENLA/268-495,Q9I8J3_BRARE/238-473),((CASP8_MOUSE/236-478,CASP8_HUMAN/234-476),Q90WU1_CHICK/237-479)))),Q9IB64_XENLA/261-494),Q6NTR7_XENLA/280-494),CFLAR_MOUSE/257-481),CFLAR_HUMAN/252-477,Q6QN97_PIG/259-484);
((((((((((((((((Q53839_STRCO/9-268:1.42608,(Q7WDK3_BORBR/552-800:1.15189,Q87Z21_PSESM/2-225:0.90865):0.08061):0.13008,((((((Q9SA41_ARATH/3-378:0.32049,(O64520_ARATH/3-386:0.13177,((O64518_ARATH/3-408:0.09060,O64519_ARATH/3-366:0.11479):0.05264,((Q70VV0_PICAB/3-415:0.24744,Q9ZSP8_HEVBR/3-415:0.13304):0.03537,O64517_ARATH/3-416:0.11974):0.05669):0.09062):0.04581):0.13322,Q8LCR8_ARATH/5-316:0.45970):0.43716,(((((Q6BH13_DEBHA/146-437:0.18530,(O74477_SCHPO/130-422:0.25476,((Q6CLS0_KLULA/161-453:0.12632,(Q08601_YEAST/157-450:0.06728,Q6FPX9_CANGA/98-389:0.10903):0.03862):0.05199,Q75B43_ASHGO/154-449:0.17899):0.04959):0.05143):0.05687,Q6C2Y6_YARLI/168-458:0.13241):0.14327,((O81911_ARATH/80-386:0.11577,Q7XC24_ORYSA/76-374:0.09964):0.11885,Q7XJE5_ARATH/116-414:0.24301):0.46852):0.09403,Q7RFI8_PLAYO/964-1364:1.43815):0.19712,((Q8IEW1_9TRYP/63-322:0.36739,Q8T8E6_9TRYP/84-343:0.25227):0.10340,Q8T8E8_9TRYP/84-341:0.42926):0.27078):0.20488):0.43345,Q74F93_GEOSL/6-270:1.00415):0.30610,Q82I86_STRAW/5-276:1.04179):0.13251,Q7NPG1_GLOVI/7-278:1.12302):0.14086):0.32708,P74453_SYNY3/40-299:1.30956):0.08132,Q8YS65_ANASP/4-245:1.18948):0.18377,(Q9GPM2_DICDI/188-405:1.25247,Q86JK1_DICDI/22-316:0.81516):0.63253):0.09734,(Q19719_CAEEL/252-476:0.78072,(Q8BFT0_MOUSE/340-577:0.18982,Q9DDL2_BRARE/323-560:0.18834):0.52466):0.60238):0.13101,(((Q6NBN5_RHOPA/57-277:0.36175,Q89XE4_BRAJA/58-278:0.17975):0.26311,(Q6N0T4_RHOPA/30-251:0.18444,Q89XG2_BRAJA/27-248:0.18756):0.18924):0.48732,(Q98JS7_RHILO/35-253:0.81890,(Q98CE0_RHILO/5-238:0.77509,((((Q6N5Q1_RHOPA/33-253:0.20152,Q89KP2_BRAJA/86-307:0.09071):0.19281,Q985X8_RHILO/35-256:0.19302):0.49440,((Q6N329_RHOPA/73-298:0.21516,Q89FZ4_BRAJA/32-256:0.21043):0.21513,Q89HT8_BRAJA/51-272:0.27819):0.11709):0.12391,((Q98IJ6_RHILO/11-238:0.52433,(Q98G71_RHILO/26-252:0.47480,((Q89HP3_BRAJA/336-569:0.39674,Q98IJ9_RHILO/30-261:0.47068):0.18064,Q89IK1_BRAJA/30-253:0.53462):0.08916):0.07490):0.08746,(Q6AKF4_DESPS/28-248:0.62735,Q89MV1_BRAJA/176-400:0.45341):0.11787):0.11576):0.08427):0.03928):0.09228):0.25677):0.71392,(Q7QGM9_ANOGA/4-212:0.76016,(Q9NBW3_DROME/38-248:0.54708,Q9V9J6_DROME/313-523:0.43692):0.24327):0.32580):0.21961,ICENC_DROME/196-443:0.89141):0.15810,((((O18203_CAEEL/293-532:0.51027,Q9TZP5_CAEEL/26-261:0.50430):0.26063,(CED3_CAEEL/243-494:0.34516,Q9Y1U6_PRIPA/173-413:0.44327):0.14757):0.13113,(Q9GV89_HYDAT/93-318:0.85693,Q8I749_SUBDO/254-491:0.87454):0.14572):0.07267,((O55194_RAT/200-445:0.15841,CASP2_CHICK/171-416:0.11412):0.59675,((CASPE_MOUSE/22-256:0.19947,CASPE_HUMAN/18-241:0.08093):0.58793,((Q9DDJ2_BRARE/174-400:0.49754,Q9I9L7_BRARE/145-379:0.36483):0.21367,((O42284_CHICK/42-279:0.37066,(((CASPC_MOUSE/176-415:0.33146,(CASP1_FELCA/161-406:0.09692,((CASPD_BOVIN/136-373:0.10527,CASP5_HUMAN/177-414:0.17557):0.03452,CASP1_CANFA/163-400:0.09086):0.02752):0.07346):0.04327,CASP4_MOUSE/132-369:0.30080):0.10955,(CASP1_MOUSE/162-398:0.16173,(CASP1_HUMAN/163-400:0.15245,CASP1_PIG/163-400:0.11451):0.04969):0.10725):0.16176):0.15774,CAS1A_XENLA/144-382:0.30213):0.20145):0.35491):0.12682):0.10290):0.08509):0.07126,((((Q8ITP3_BRAFL/87-323:0.30894,(Q8ITP2_BRAFL/151-396:0.33285,(((CASP6_MOUSE/28-270:0.14686,O93415_CHICK/57-299:0.14612):0.03887,Q9I8S9_ONCMY/57-297:0.20353):0.07100,Q9IB66_XENLA/58-298:0.19451):0.25756):0.28804):0.08970,((O88550_RAT/68-301:0.18295,Q6DCI2_XENLA/78-314:0.18205):0.13624,(Q9GV88_HYDAT/84-316:0.71593,((Q8JG42_FUGRU/51-279:0.13168,Q98UI8_BRARE/48-280:0.13194):0.10972,(Q8JIS8_ORYLA/58-285:0.32290,(O93417_CHICK/53-281:0.19696,CASP3_XENLA/56-280:0.29580):0.07567):0.03279):0.12517):0.00844):0.11802):0.08253,(((((Q7PZJ9_ANOGA/20-250:0.17068,Q7QKT2_ANOGA/35-260:0.28316):0.45092,Q9NHF9_DROME/56-302:0.42150):0.12717,(Q7PV92_ANOGA/18-255:0.23105,Q86FL0_ANOST/52-286:0.24505):0.10540):0.12586,Q7Q803_ANOGA/54-306:0.27129):0.24210,(Q7Q1E0_ANOGA/53-282:0.42528,((CASP1_SPOFR/61-293:0.25786,(ICE_DROME/94-328:0.14290,CASP1_DROME/79-313:0.24083):0.02079):0.06854,Q7Q4X6_ANOGA/73-309:0.20202):0.14007):0.22561):0.17296):0.11314,(((CASP9_HUMAN/161-413:0.24106,Q90WU0_CHICK/148-400:0.17114):0.08117,Q9IB63_XENLA/144-396:0.24420):0.49906,Q8I6Y2_GEOCY/158-414:0.48626):0.06865):0.06295):0.17679,(Q6E5N8_ICTPU/119-362:0.53627,((Q6PAD9_XENLA/268-495:0.39890,Q9I8J3_BRARE/238-473:0.48983):0.10075,((CASP8_MOUSE/236-478:0.18776,CASP8_HUMAN/234-476:0.11130):0.13474,Q90WU1_CHICK/237-479:0.21790):0.16074):0.07547):0.10324):0.13848,Q9IB64_XENLA/261-494:0.50014):1.06489,Q6NTR7_XENLA/280-494:0.54843):0.33408,CFLAR_MOUSE/257-481:0.28283):0.05864,CFLAR_HUMAN/252-477:0.17250,Q6QN97_PIG/259-484:0.14862);