EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00565 alignment
(18 sequences with 561 bp)


YHCR_BACSU/376-517 GGAGAATATGAAGGGATTGTTGACCGGGTAGTTGACGGC---GATACCATTCATCTTAAATCTCCGGTGCTTGGA............................................................---ACGACAAAAATCCGGTTTGTAAATGTAGATGCACCCGAAACATATCACACACCAAAAAATGACGCAGAT---------............------------GAAAATCAATTAAGATTTGGCAAAAAAGCATCTGACTATCTAAAAACGGTTCTGTCCCCGGGTGATAAAATTACTGTCAAGGTCGGGAGT......gaaGCCAAGGACAGCTATGGCAGATTGCTCGGACAAGTCATAACCGAA------------...---------TCAGGTTCAAACGTGAACTTAGAGCTTGTAAAAAACGGCTATGCTCCGACGTATTTT---ATTTGGCCGGTTGAC...AATGAAGAGGATTATCAGCAATTTCAGGCCGCAGTAGCCGCTGCAAAAAAAGATCAAAAAGGAATTTGGAATGAA
Y1439_METJA/53-204 GAACACTACTACGGAAAGGTTGTTAAGGTTGTAGATGGA---GACACTGTTTATGTTGAAGTTAATGGG------............................................................GAATTATGGAAGATTAGGCTTTTAGGGGTAGATACTCCAGAAATTCACAAGAGAAACAACCCGTATGAATATTATTTATTAaatggaacaccgATAACAGATACAAAATACTTAAAAGAATGGGGCTATAAAGCTAAGCATTTTGCAGAAAAAGAACTTAAA---AATAAAACAGTTATAATTGTCTTTGATAATgaagccccaAAGAAAGATAAATATGGGAGATATTTAGCATACATCTTTATAAATAATAGTAAT---...---------AATTTAATAAACTTCAATGAAGAGCTTTTAAAGTATGGATATGCAAGG------------GTTTATATAAGT---...AATTTTGAGTTAAAGGATGAATTCTTAAATGTTGAGAGGGAAGCTAAAGAAAATAGAGTGGGTTTATGGAATTGG
O58971_PYRHO/30-175 AAAGAGCTACATGGTAAGGTTATCAAGGTCGTTGATGGG---GATACGCTGTACGTTAAGCTTGATGATGGT---............................................................GAAGTAGTAAAGGTTAGACTAGTAGGGGTAGACGCCCCTGAGCTAGAGGAGGGGCTAATGAGGCCTGGAGAATATCCTGGG............ATTCATAACATGACGTGCCTGATTAAGTATGGGGAACTAGCTAAGGAGTTTCTAAAAAACATAACCCTA---GGTAAATCCGTAACTCTTGAATTCGATTCAattcaaggaAGGAAAGATAAATACGGACGTTTATTGGTGTACATGTATCTAAAT------------...------------GGAACCGATATTAATGCTGAGCTTATAAAAATGGGATTTGCAAGG------GTT---TTCTATGAAAAA---...AGATTTGAAAAGATTAAGGAATACTCAAAGCTTGAAGATGACGCCAGGAAAAGGAGGTTAAACTTATGGAGTTGC
P94492_BACSU/64-197 AAATTGGTCAATGTTACATTAGATAGAGCAATAGATGGA---GATACGATTAAGGTTATTTACAACGGA------............................................................AAGAAAGACACAGTTCGCTACTTGCTCGTTGATACACCTGAGACGAAGAAACCAAATTCT---------------------............---------------TGTGTTCAACCATACGGTGAGGATGCGTCGAAACGAAATAAAGAATTGGTCAAC---AGCGGTAAGCTACAGCTGGAATTTGATAAAggcgat...CGCAGAGATAAGTATGGAAGACTGTTAGCATACGTTTATGTTGAC------------...------------GGCAAATCTGTTCAAGAGACATTATTGAAAGAGGGATTGGCCAGAGTAGCATAT---GTATATGAGCCT---...AACACAAAATACATAGACCAATTCAGACTAGATGAGCAAGAAGCAAAATCAGATAAACTGTCAATTTGGAGTAAG
NUC_STAAU/90-224 CATAAAGAACCTGCGACTTTAATTAAAGCGATTGATGGT---GATACGGTTAAATTAATGTACAAAGGT------............................................................CAACCAATGACATTCAGACTATTATTGGTTGATACACCTGAAACAAAGCATCCTAAAAAA---------------------............---------------GGTGTAGAGAAATATGGTCCTGAAGCAAGTGCATTTACGAAAAAAATGGTAGAAAATGCAAAGAAAATTGAAGTCGAGTTTGACAAAggtcaa...AGAACTGATAAATATGGACGTGGCTTAGCGTATATTTATGCTGAT------------...------------GGAAAAATGGTAAACGAAGCTTTAGTTCGTCAAGGCTTGGCTAAAGTTGCTTAT---GTTTACAAACCT---...AACAATACACATGAACAACATTTAAGAAAAAGTGAAGCACAAGCGAAAAAAGAGAAATTAAATATTTGGAGCGAA
NUC_STAIN/37-168 AGAGGCGAATCATATCTCGTTAAACGCGTAATCGATGGA---GATACCATTATTATCGATAAAGATGGG------............................................................CAAGATGAACGTGTACGCTTAATTGGTGTGGATACACCAGAAACAGTTAAACCGAATACG---------------------............---------------CCAGTGCAACCATACGGAAAAGCTGCATCAAATTTTACAAAGAAACATTTAACG---AATCAACGTGTTAGATTGGAATATGATCGT...gaa...CCAAAAGATAAATACGGACGTACATTGGCTTATGTTTGGTTAGGA------------...------------GACGAAATGTTTAATGTAAAATTAGCAAAAGAAGGTTTAGCTAGA---GCCAAA---TTTTATCCACCG---...AATGATAAATATCGTATATTGATTGAACAAGCCCAAAAGGAAGCACAAAAGAAACAGCTGAACATTTGGGAACGC
NUC_STAHY/38-169 AATGAACAAACATATAAAGTAATACGCGTCATTGATGGA---GATACAATTATCGTTGATAAAGATGGT------............................................................AAACAACAAAACCTAAGGATGATTGGGGTAGATACACCAGAAACAGTAAAACCTAACACA---------------------............---------------CCTGTTCAACCTTATGGTAAAGAAGCTTCAGACTTTACAAAACGTCACTTAACT---AATCAAAAAGTACGTTTAGAATATGATAAG...caa...GAAAAAGACCGTTATGGTAGAACTTTGGCTTACGTCTGGTTAGGA------------...------------AAAGAAATGTTTAATGAAAAGCTAGCTAAAGAAGGTTTGGCACGT---GCAAAA---TTCTATCGTCCT---...AATTACAAATATCAAGAGCGTATAGAACAAGCACAAAAACAAGCTCAAAAGTTAAAAAAGAATATTTGGAGTAAT
O66926_AQUAE/19-168 GAACTTATCCCTTGCAAAGTCGTAAGGGTAGTTGACGGT---GATACCTTCAGGTGCGTTCCCGAAGGGAAAAGC............................................................AGGTTCATAAAAGTAAGACTCATGGGAATAGACACCCTTGAAACGAACAACATGAAGAAGGGAATGGGACAGGCAAAGTGGttt.........TACGGAGGGATAAGAACCGTTAAGGAATTTGGAAAGAAGGCAAAGGAATTCTCAAAGAGATTGATTGAT---AAGAAAGTAGTTTACTTGGAACTGCCCGTCagg......AAGATGGACAACAACGGCAGGTATCTCGCCTACGTATGGCTCGATGAGTATCGT---...------------AACAAAATGTTAAACCTTCTCCTCGTAAAGGAAGGACTCGCATTC---GTTTTC---ATAATCCCTCCT---...CAGGTGAAGTACTTAAAAGAATTGGGAGAAGCTCAGGAGGAGGCCTACAAGGATAGAAGGGGTTTCTGGAAGTAC
YFI3_ECOLI/19-140 GCAGATATTCATGGACGGGTTGTTCGTGTACTGGACGGT---GATACCATCGAGGTCATGGACTCACGG------............................................................AAGGCGGTGCGGATCAGGCTGGTAAATATTGATGCACCGGAAAAGAAA---------------------------------............---------------------CAGGATTATGGCCGGTGGTCGACAGACATGATGAAATCACTGGTTGCAGGAAAAACGGTTACCGTCACATATTTTCAGCGA.........------GATCGTTATGGTCGTATTCTCGGGCAGGTTTATGCA---------------...------CCAGACGGAATGAATGTTAATCAGTTTATGGTCCGGGCCGGGGCTGCCTGGGTATATGAG---CAGTACAAC------...---------ACAGATCCCGTGCTGCCTGTCCTTCAGAACGAAGCCAGACAACAAAAACGTGGGCTCTGGTCAGAT
PAB4_ECOLI/130-261 GCCGAGCTGCGCGGCGAGGTCGTGCGCATCATCGACGGC---GACACCATCGACGTGCTGGTAGACAAG------............................................................CAGCCGGTGCGCGTGCGCCTGGTGGACATTGACGCGCCGGAAAAGCGG---------------------------------............---------------------CAAGCCTTCGGCGAACGTGCGCGCCAGGCGCTGGCCGGCATGGTGTTCCGCCGGCACGTCCTGGTCGACGAGAAGGACACC.........------GACCGTTACGGCCGCACGCTGGGCACCGTGTGGGTCAACATGGAGCTGGCCagcCGGCCGCCGCAGCCGCGCAACGTCAACGCCGCGATGGTTCACCAGGGCATGGCGTGGGCCTATCGC---TTCCACGGCCGC---...GCG------GCCGACCCTGAAATGCTGCGGCTCGAACAGGAGGCGCGAGGCAAGCGCGTCGGCCTCTGGTCCGAT
NUC_SHIFL/25-156 GCCGACTTCCGGGGTGAAGTCGTCCGAATCCTTGACGGT---GACACTATCGACGTTTTGGTGAACCGT------............................................................CAGACCATCCGCGTGAGATTGGCCGATATTGACGCACCGGAAAGCGGC---------------------------------............---------------------CAAGCCTTCGGCTCCCGTGCTCGCCAACGGCTCGCCGACTTGACCTTTCGCCAAGAGGTTCAAGTGACCGAAAAAGAGGTT.........------GATCGGTATGGCCGCACTCTTGGGGTCGTTTACGCGCCGTTGCAATACCCCggcGGCCAAACACAACTCACCAACATCAATGCGATCATGGTTCAAGAAGGCATGGCCTGGGCTTACCGT---TATTACGGCAAA---...CCA------ACCGACGCGCAGATGTACGAGTATGAAAAAGAGGCCCGCCGCCAACGGCTCGGCCTTTGGTCAGAC
Y1296_HAEIN/24-145 GAAAAAAATACGTGTCGTGTGGTTAAAATTAGTGATGGC---GATACGCTCACTTGCCTCACTAAAGGCAAT---............................................................AAATCCATTAAAGTTCGTTTAGCCGAAATTGATGCGCCAGAAAAATCT---------------------------------............---------------------CAAGCCTTTGGGCAAAAATCGAAAAAAACCTTGTCTGATCTGGTTTATCAAAAAAATGTTCGCCTTGCGCGAAAAGGAAAA.........------GATCGCTATCAACGCACCTTAGCGGTGGTTTATTATCAA------------...------------AAACAAAATATTAATTTAGAAATGGTTAAACAGGGTATGGCATGGGCTTATAAG---CAATATTCC------...---------CATGATCCGATTTATCTTCAAGCACAAGAAAATGCACAAGCCAAAGGAATTGGTCTTTGGGCAGAC
Y38K_CORSE/202-321 AAGAACATTGTTGATGCTGGTTACAGGGTCTTAAGTGGTCCAAATAATGAAGATATTCTTGCTCGAAAA------............................................................------TATCGAATCCGGTTAAGGGGTATTGATTCACCGGAAAGTTCG---------------------------------............---------------------ATGCCGTTTGGAAAGGAGGCAAAGGAGGAACTGATTAAATTAGTTGTAGGGAAGTGTTTGACAGTTCATATTTATGAGGAA.........------GATCGTTACGGTCGATCTGTAGGTGATATCTACTGCAAT------------...------------GGACAATTCATACAGGAGAAAATGCTCAAGAAAGGCCTTGCTTGGCATTACACA---GCTTATGAT------...---------AAACGTCCCCAACTCTCCAAGTGGGAAGAGAAGGCTCGAGCTGCCAGAGTTGGACTGTGGGCATCG
YGI5_YEAST/124-261 ---AAAATACAAAAAGCTAAAAGCCAGTTCTTGAAGCTA------AATGTACCTTACAAAAATAGGAAAAACCTG............................................................CCAACTATTCCTATAAGATTATGTGGAATCGATGCCCCAGAAAGAGCACATTTCGGTAAC---------------------............---------------CCAGCTCAACCGTTTGGTAATGAAGCTTTAATTTGGTTACAAAACCGAATTTTGGGAAAGAAAGTATGGGTCAAGCCTTTATCTATA.........------GATCAGTACAACCGTTGTGTAGCTCGAGTGTCATACTGGGACTGGTTTGGT...---------GGGTGGAAAGACTTAAGCTTAGAAATGCTCAAGGATGGATTAGCGGTTGTTTATGAGGGTAAAGTAAACACAGAA...TTTGATGATAGAGAAGATAAGTATCGATATTATGAATTTTTGGCAAGATCTAGAAAAAAGGGACTGTGGATCCAG
O60168_SCHPO/55-216 AAAACTATGTTCGGATATGTAACTAGAGTAGGTGACGGT---GACAACTTTCGTTTTTATCATACTCCGGGAGGTcgtttgttaggatggcactggttaagaaaagtgccatgcagtagatctgatttatcgaatGAAACCATTTCTGTGCGTCTCGCAGGAATTGATGCCCCAGAATCTGCGCATTTTGGTAAA---------------------............---------------CAGGAGCAACCTTATGCCTTAGAAGCCAAAGAGTTCTTGCATAATAAACTTTATCATAAAAGCGTTAGGATCATTCCCCTAAAAATT.........------GACCGCTACGCTAGACTTGTTGCAGGAGTCCAGTATTATCCAATTCCC---...CATTTCTTTTGGAAGAAAGACATTGGTCCCCAGATGATTCGTAAAGGTTTGGCTGTGGTTTATGAGGGCAGTGATGGTGTATTT...TGTCCAACTAAAAAAGAATGTCTTTTAGCTTTAGAAATAGTTGCCAAAAAGAAAAAGTTGAGCCTTTGGTCTCAG
Q19328_CAEEL/524-668 GGAAGAGCTGAAGGAGTTGTGGAGTTCCTATCAGGTGGATCTCGTCTTCGCATTTACATTCCAAAGGAGACT---............................................................GTTCTTATCACGTTTTTGTTGGGAGGAATTAACTGCCCGAAGGGAGCTCGTGTTGGACCAGGAGGAGTATCGACTGGA---............---------------GCCGCTGAGCCATTCGCCGATGAGGCTGCTGCATTCACCCGAAAGCTTGTCCTCCAACACGAGGTTCAACTAGAAGTAGAGAGCACC.........------GATAAGAATGGAAACTTTGTTGGATACTTGTATGTGTCTCCAGATGGAAAT...---ACTTCACGAGCAATCAATCTAAGCGAAGCTCTTGTAGAGAATGGACTTGCTTCTCTTCACTTCACAGCTGAGCGAAGT---...------GGGCATTACAACGCTCTTCTTTCCGCCGAAAACAAAGCTAAGAAAGCTAAGAAGAACATTTGGGCCAAC
O60040_AJECA/491-624 AGGAAGGTGCCTGGTGTTGTTGATTTCGTAAAATCCGGCTCTCGCTTCACCATCCTACTTCCTAAAGATAAT---............................................................GCTAAGCTCACACTGGTCCTTTCCGGCATCCGGGCTCCCAGATCGGCGAGGAACCCAGGA---------------------............------------GAGACTGGGGAGCCGTTCGGGCAAGAAGCCCATGACTTCGCCTACCGAAGATGTATGCAACGCGACGTTGAAATAGACGTCGAGACAATT.........------GACAAGGTCGGTGGATTCATCGGCAGTCTCTATATCAAC------------...------------AGAGAAAGCTTTTCCAAGATTCTTGTTGAAGAAGGCCTTGCGACTGTCCATGCC------TATTCTGCTGAG...CAAGGAGGTCACGCTGCAGAGCTGTTCGCAGCGGAGAAAAAAGCCAAAGAGGCCCGAAAAGGCTTGTGGCATGAC
O60040_AJECA/324-462 GCGCAAGCGGATTATGTTGTGACTCGAGTGTTTAGTGCA---GACACCATTTTTGTTCGAACGAAGACAGGAAAG............................................................GATGAGAAGCGGATAAGCCTCAGCAGCGTCAGACATCCAAGAACATCCGACCCTAAGCAG---------------------............---------------------GCACCTTTCATCTTAGAGGCTAAGGAATTTATGCGCAAGAAGCTCATCGGTAAACACGTCAAAGTAAAAATTGATGGAAAAagacccgcaTCGGAAGGTTACGAGGAACGGGAGGTTGGTACGGTCATGTCTGGA------------...------------AACACAAACATTGCATTGGCCCTCGTGCAGGCTGGTTACGCATCCGTCATCCGCCATCGCCGGGATGATGACgacCGGTCTCCTGAATACGATGATCTACTCCGTGCGGAAGAAGCAGCTCAGAAGGAGGGGAAAGGAATGTGGTCTTCT