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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00564 phylogeny
for restricted amino acid alignment


 
(((((((((REF2P_DROME/3-88,M172_HUMAN/4-85),((KPCZ_HUMAN/15-98,(KPCI_HUMAN/16-97,Q9GSZ3_DROME/30-111)),PKC3_CAEEL/12-95)),(((Q9D222_MOUSE/18-97,O96611_DICDI/15-101),((((Q9LTX8_ARATH/24-105,((Q9FML0_ARATH/29-112,Q9STK4_ARATH/28-111),(Q9LRV7_ARATH/43-132,Q9S843_ARATH/22-106))),((Q9M0Y0_ARATH/42-130,(((Q9LJQ7_ARATH/78-168,Q9ZU48_ARATH/89-181),Q9FRH9_ARATH/25-110),Q9LF06_ARATH/45-138)),Q9FGF3_ARATH/59-153)),((Q9FKL3_ARATH/38-123,Q9STG4_ARATH/89-178),(O64768_ARATH/191-277,((O23015_ARATH/119-206,Q9LRY7_ARATH/190-277),Q9SA26_ARATH/179-266)))),(Q9FI74_ARATH/19-100,Q9M9L2_ARATH/19-102))),((CDC24_YEAST/761-854,Q9HF59_ASHGO/680-760),Q9SB64_ARATH/7-92))),(SCD1_SCHPO/774-871,(Q9GRV1_CAEEL/254-335,Q9DGF6_XENLA/10-91))),((O60533_HUMAN/71-151,(NCF2_HUMAN/351-429,O70145_MOUSE/350-428)),(((M3K2_HUMAN/43-122,M3K3_HUMAN/44-123),SCD2_SCHPO/459-532),(PAR6_CAEEL/14-96,(O97111_DROME/19-101,((PAR6B_HUMAN/16-96,PAR6G_HUMAN/18-98),PAR6A_HUMAN/15-95)))))),((Q9SGW2_ARATH/747-829,(O22987_ARATH/863-945,(O22864_ARATH/847-929,((Q9SVF1_ARATH/673-759,Q9LE38_ARATH/744-827),(Q9S7B1_LOTJA/780-863,O65500_ARATH/867-955))))),(BEM1_YEAST/478-551,(((Q9FMV3_ARATH/404-489,Q9LUF7_ARATH/413-498),(Q9LF97_ARATH/416-502,Q9SJQ5_ARATH/408-489)),YE45_SCHPO/574-653)))),(P92988_ARATH/290-382,O49385_ARATH/317-396)),(NCF4_HUMAN/237-329,NCF4_MOUSE/237-329)),Q99JM8_MOUSE/20-102,Q13502_HUMAN/1-82);
(((((((((REF2P_DROME/3-88:1.83177,M172_HUMAN/4-85:0.50110):0.26630,((KPCZ_HUMAN/15-98:0.27027,(KPCI_HUMAN/16-97:0.17770,Q9GSZ3_DROME/30-111:0.45265):0.15479):0.34358,PKC3_CAEEL/12-95:0.68189):0.41088):0.30334,(((Q9D222_MOUSE/18-97:1.09167,O96611_DICDI/15-101:1.11264):0.17279,((((Q9LTX8_ARATH/24-105:0.44899,((Q9FML0_ARATH/29-112:0.08454,Q9STK4_ARATH/28-111:0.17749):0.33863,(Q9LRV7_ARATH/43-132:0.26587,Q9S843_ARATH/22-106:0.22921):0.22292):0.13004):0.02814,((Q9M0Y0_ARATH/42-130:0.30000,(((Q9LJQ7_ARATH/78-168:0.21933,Q9ZU48_ARATH/89-181:0.10886):0.04722,Q9FRH9_ARATH/25-110:0.55185):0.10396,Q9LF06_ARATH/45-138:0.62635):0.10284):0.14038,Q9FGF3_ARATH/59-153:0.33123):0.18218):0.06541,((Q9FKL3_ARATH/38-123:0.21955,Q9STG4_ARATH/89-178:0.34907):0.05698,(O64768_ARATH/191-277:0.20168,((O23015_ARATH/119-206:0.26966,Q9LRY7_ARATH/190-277:0.28285):0.11581,Q9SA26_ARATH/179-266:0.19767):0.09806):0.21310):0.04077):0.20373,(Q9FI74_ARATH/19-100:0.44849,Q9M9L2_ARATH/19-102:0.30179):0.85785):0.97147):0.18278,((CDC24_YEAST/761-854:0.42814,Q9HF59_ASHGO/680-760:0.38144):0.74376,Q9SB64_ARATH/7-92:0.84293):0.23113):0.07064):0.17715,(SCD1_SCHPO/774-871:0.85071,(Q9GRV1_CAEEL/254-335:0.86423,Q9DGF6_XENLA/10-91:0.65339):0.21439):0.17661):0.09387,((O60533_HUMAN/71-151:1.20211,(NCF2_HUMAN/351-429:0.00000,O70145_MOUSE/350-428:0.28915):1.22074):0.32135,(((M3K2_HUMAN/43-122:0.16754,M3K3_HUMAN/44-123:0.33120):0.85927,SCD2_SCHPO/459-532:0.87117):0.52663,(PAR6_CAEEL/14-96:0.31495,(O97111_DROME/19-101:0.42678,((PAR6B_HUMAN/16-96:0.06717,PAR6G_HUMAN/18-98:0.24246):0.28555,PAR6A_HUMAN/15-95:0.33709):0.32176):0.13760):0.52780):0.16463):0.11860):0.10491,((Q9SGW2_ARATH/747-829:0.24838,(O22987_ARATH/863-945:0.18154,(O22864_ARATH/847-929:0.66369,((Q9SVF1_ARATH/673-759:0.33798,Q9LE38_ARATH/744-827:0.63122):0.06793,(Q9S7B1_LOTJA/780-863:0.36487,O65500_ARATH/867-955:0.56797):0.10553):0.37022):0.07760):0.15765):0.38415,(BEM1_YEAST/478-551:1.10000,(((Q9FMV3_ARATH/404-489:0.18733,Q9LUF7_ARATH/413-498:0.16291):0.27677,(Q9LF97_ARATH/416-502:0.12589,Q9SJQ5_ARATH/408-489:0.23139):0.18398):0.60389,YE45_SCHPO/574-653:0.66327):0.42909):0.07594):0.15336):0.31345,(P92988_ARATH/290-382:0.46187,O49385_ARATH/317-396:0.37489):0.36033):0.28926,(NCF4_HUMAN/237-329:0.07519,NCF4_MOUSE/237-329:0.07362):1.15972):1.04070,Q99JM8_MOUSE/20-102:0.06875,Q13502_HUMAN/1-82:0.00000);