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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00520 phylogeny
for nucleotide alignment


 
((((((((Q9ZT83_ARATH/134-295,(((((KCNQ3_HUMAN/155-351,KCNQ2_HUMAN/125-312),KCNQ1_HUMAN/155-347),(KCNQ4_HUMAN/131-318,Q9XWG9_CAEEL/109-301)),(Q9XSP9_RABIT/136-264,(((((KCNAL_DROME/228-405,P91784_POLPE/239-415),(((Q26094_POLPE/222-397,Q26095_POLPE/220-398),Q09658_CAEEL/270-452),((KCNA6_RAT/263-458,KCNA1_HUMAN/220-407),((KCNAS_DROME/278-477,Q9XXX0_HALRO/271-461),Q25376_LOLOP/217-403)))),(Q16976_APLCA/267-457,(((KCNAB_DROME/473-658,Q26039_PANIN/181-355),Q26344_APLSP/354-539),((P97557_RAT/244-430,((KCNS1_MOUSE/240-427,KCNS2_MOUSE/226-409),KCNS3_HUMAN/221-405)),(KCNG2_CHICK/257-452,KCNG1_HUMAN/267-459))))),((O76457_APLCA/230-409,((Q19464_CAEEL/232-414,(O17535_CAEEL/258-439,Q22012_CAEEL/233-411)),KCNAW_DROME/230-412)),Q9RW39_DEIRA/66-240)),(P91783_POLPE/217-401,(Q9VLC6_DROME/335-506,((O76266_HIRME/251-434,(P91256_CAEEL/246-433,Q9XXD1_CAEEL/278-465)),KCNF1_HUMAN/221-405)))))),((O54982_MOUSE/138-311,((SLO_DROME/163-336,SLO1_CAEEL/177-351),KCMA1_RAT/214-388)),(((((O76977_STRPU/249-459,(HCN2_MOUSE/216-431,HCN1_MOUSE/163-382)),O96777_HELVI/149-372),((((O97119_LIMPO/229-422,((CNGA1_BOVIN/197-394,CNG1_CHICK/244-441),(CNGA2_BOVIN/174-371,(CGN2_RAT/68-265,CNG_DROME/141-346)))),(Q9U5E2_DROME/159-353,(Q93486_CAEEL/146-396,CNG_CAEEL/203-410))),((O62237_CAEEL/255-455,Q9W2D5_DROME/502-692),CNGB1_BOVIN/804-993)),((((((CNGC6_ARATH/154-431,CNGC5_ARATH/140-415),CNGC7_ARATH/142-419),CNGC3_ARATH/127-394),O65816_HORVU/141-390),CNG16_ARATH/95-374),(O96385_PARTE/187-371,Q27170_PARTE/193-376)))),(SKOR_ARATH/113-328,(Q9SM12_MAIZE/101-307,(((Q9XH40_SAMSA/109-315,(O04703_SOLTU/120-326,AKT2_ARATH/107-312)),Q9ZPL4_SAMSA/112-318),(KAT2_ARATH/101-306,(AKT5_ARATH/109-312,(((KAT3_ARATH/117-324,Q9SCF5_DAUCA/91-297),(O24538_VICFA/87-293,Q41461_SOLTU/92-299)),((O04242_MAIZE/95-298,O24382_SOLTU/94-297),(AKT1_ARATH/88-288,O49846_9LILI/8-193))))))))),((((KCNH8_RAT/266-473,KCNH4_RAT/273-479),KCNH3_RAT/270-507),(Q23974_DROME/297-504,(KCNAE_DROME/269-488,(O44164_CAEEL/262-484,(KCNH1_BOVIN/249-498,KCNH5_RAT/246-467))))),(KCNH2_HUMAN/451-659,(KCNH6_RAT/299-515,(O02497_DROME/363-574,Q18325_CAEEL/121-337)))))))),(((O61567_HOMAM/1238-1406,O96310_HELVI/262-424),((O08661_RAT/373-542,P79285_PIG/4-166),O13054_MAKNI/4817-4980)),(((ITPR1_MOUSE/2359-2588,ITPR2_HUMAN/2314-2540),(O77089_PANAR/2373-2612,IP3R_DROME/2407-2680)),ITPR3_HUMAN/2289-2516))),(((((((((SCN1_LOLBL/77-333,(O44930_9CNID/135-380,(O62604_POLPE/144-384,Q17314_CYACP/165-407))),((((O02037_9TURB/157-406,Q25377_LOLOP/155-400),Q25150_HALRO/153-465),(SCNA_DROME/177-428,Q93135_BLAGE/1-216)),(O42421_CHICK/2-206,((Q90519_FUGRU/2-205,((SCNA_ELEEL/147-401,(P97706_RAT/143-393,SCN7A_HUMAN/143-393)),((Q63541_RAT/159-411,(SCN9A_RAT/151-401,(SCN1A_RAT/153-422,SCN3A_HUMAN/153-423))),(Q90518_FUGRU/154-415,(SCN5A_HUMAN/156-412,SCN4A_HUMAN/156-446))))),(SC10A_CANFA/152-405,(SC11A_RAT/155-394,SC11A_HUMAN/158-399)))))),((((CAC1S_RANCA/85-331,CAC1S_HUMAN/85-333),(CAC1S_CYPCA/104-350,CAC1F_HUMAN/126-371)),((((Q18698_CAEEL/122-367,CAC1D_DROME/649-877),(O02038_CYACP/147-380,O97017_9CNID/115-350)),CAC1D_CHICK/155-400),CAC1C_HUMAN/158-404)),(O96057_HALRO/81-316,(CAC1A_HUMAN/132-359,(CAC1A_DROME/72-312,P91744_LOLBL/99-336))))),(Q9W433_DROME/41-316,((CAC1H_HUMAN/135-418,CAC1G_RAT/116-394),CAC1I_RAT/112-395))),((CAC1G_RAT/1288-1515,Q9W433_DROME/1883-2111),(((CAC1A_HUMAN/1276-1510,(CAC1A_DROME/801-1039,(P91744_LOLBL/927-1162,Q17354_CAEEL/373-611))),((CAC1S_CYPCA/847-1080,((CAC1D_HUMAN/918-1151,CAC1C_HUMAN/952-1185),CAC1S_HUMAN/831-1064)),(O96057_HALRO/836-1070,((O02038_CYACP/901-1135,O97017_9CNID/882-1115),(Q18698_CAEEL/830-1063,CAC1D_DROME/1376-1609))))),((((SCNA_DROME/1334-1559,(Q25377_LOLOP/1056-1284,(O02037_9TURB/1019-1247,SCN1_LOLBL/815-1040))),Q9XZC1_BOOMI/495-721),(Q25150_HALRO/1294-1535,(((((SC10A_CANFA/1192-1424,SCN5A_HUMAN/1238-1469),Q28371_HORSE/1061-1291),SCNA_ELEEL/1033-1263),(O88420_RAT/1229-1461,SCN1A_RAT/1251-1482)),((P97706_RAT/988-1213,SCN7A_HUMAN/967-1192),(SC11A_RAT/1067-1287,SC11A_HUMAN/1089-1307))))),(O44930_9CNID/1080-1306,(O62604_POLPE/942-1166,Q17314_CYACP/997-1219)))))),(((Q18259_CAEEL/8-263,(Q9VY40_DROME/390-607,Q9Z165_RAT/70-321)),O14234_SCHPO/215-481),((Q9VY40_DROME/704-885,(Q18259_CAEEL/360-542,Q9Z165_RAT/417-598)),((O14234_SCHPO/979-1212,CCH1_YEAST/1241-1472),(Q9VY40_DROME/1217-1454,(Q18259_CAEEL/860-1098,Q9Z165_RAT/917-1155)))))),((((((SCN5A_RAT/749-941,(SC10A_CANFA/705-898,(SC11A_HUMAN/608-810,SC11A_RAT/603-797))),(SCNA_ELEEL/597-789,Q28371_HORSE/603-795)),((P97706_RAT/558-749,SCN7A_HUMAN/536-728),SCN1A_RAT/799-991)),(Q25150_HALRO/830-1021,(O02037_9TURB/629-821,Q25377_LOLOP/623-812))),((SCN1_LOLBL/442-628,O44930_9CNID/654-846),(O62604_POLPE/518-713,Q17314_CYACP/541-733))),((((P91744_LOLBL/512-708,(CAC1A_DROME/472-666,Q17354_CAEEL/41-236)),CAC1A_RAT/520-715),((O02038_CYACP/528-726,O97017_9CNID/500-698),(((O96057_HALRO/460-658,Q18698_CAEEL/504-702),CAC1D_DROME/1016-1214),(((CAC1S_HUMAN/463-660,(CAC1S_CYPCA/478-675,O73697_FUGRU/471-668)),CAC1S_RANCA/462-659),CAC1C_HUMAN/555-752)))),(CAC1G_RAT/775-964,Q9W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