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Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00508 - PPV_E2_N)
E2 (early) protein, N terminal
(Pfam reference: accession no. PF00508)
(Interpro reference: accession no. IPR001866)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
24 sequences @ 206 aa
(ave. pairwise identity: 0.45)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 10.51)
nucleotides
(available for above)
19 sequences @ 618 bp
(ave. pairwise identity: 0.53)
New Hampshire format
(total tree length: 6.50)
amino acids, restricted set
(corresp. to available nt seqs)
19 sequences @ 206 aa
(ave. pairwise identity: 0.45)
New Hampshire format
(total tree length: 8.77)