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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00493 phylogeny
for nucleotide alignment


 
((((((Q9U3X1_ENTHI/197-522,(Q8I5T4_PLAF7/352-678,(Q8SRS4_ENCCU/268-615,(((Q8X0Y2_NEUCR/309-641,MCM5_YEAST/353-689),MCM5_SCHPO/309-642),(Q9VGW6_DROME/315-648,MCM5_CAEEL/317-673))))),(((Q86B14_DICDI/407-731,((((MCM6_RAT/19-343,Q960E3_DROME/56-380),MCM6_CAEEL/333-660),Q8SRX5_ENCCU/300-624),Q8H1A3_PEA/330-651)),(MCM6_YEAST/512-836,MCM6_SCHPO/413-737)),(Q7YY63_CRYPV/268-626,Q8IDF0_PLAF7/423-751))),(((((MCM4_SCHPO/480-811,(Q7SHS5_NEUCR/580-912,CDC54_YEAST/505-834)),(((MCM4_DROME/447-772,Q95XQ8_CAEEL/404-730),O42589_XENLA/440-765),(Q7R0J9_GIALA/381-716,Q8SSE5_ENCCU/304-622))),Q86IF1_DICDI/469-792),((((PROL_ARATH/313-638,(Q7Q6K1_ANOGA/318-640,Q9U1E0_LEIMA/317-646)),Q7R0H3_GIALA/302-626),CDC47_YEAST/397-725),Q7RJM3_PLAYO/402-752)),(MCM3_ENTHI/167-531,(((((((MCM2_DROME/445-780,Q871F1_NEUCR/476-832),Q9XXI9_CAEEL/435-777),Q8SS42_ENCCU/362-688),Q9BI22_DUGJA/443-793),Q96275_ARATH/41-383),(MCM2_SCHPO/471-810,MCM2_YEAST/480-846)),Q9U446_ENTHI/523-861)))),((Q979U9_THEVO/274-612,((Q7QSR9_GIALA/322-652,(Q8ZY88_PYRAE/266-590,(Q9YFR1_AERPE/280-607,((O29733_ARCFU/151-494,((Q8TWR7_METKA/251-570,Q8TWB5_METKA/192-488),(Q8TJF6_METAC/263-611,Q8PVX1_METMA/263-609))),O27798_METTH/256-576)))),(((Q8SQX1_ENCCU/273-608,(MCM8_MOUSE/44-404,Q9SF37_ARATH/336-678)),Q7QZN0_GIALA/424-793),(Q9ZPT4_ARATH/300-581,Q8SRK9_ENCCU/211-526)))),Q975E0_SULTO/138-460)),Y363_METJA/339-669),Y1489_METJA/271-595,Y3513_METJA/258-581);
((((((Q9U3X1_ENTHI/197-522:0.23991,(Q8I5T4_PLAF7/352-678:0.36444,(Q8SRS4_ENCCU/268-615:0.39495,(((Q8X0Y2_NEUCR/309-641:0.28246,MCM5_YEAST/353-689:0.18760):0.07245,MCM5_SCHPO/309-642:0.18582):0.06973,(Q9VGW6_DROME/315-648:0.30112,MCM5_CAEEL/317-673:0.22483):0.14391):0.06280):0.07613):0.04664):0.09464,(((Q86B14_DICDI/407-731:0.29788,((((MCM6_RAT/19-343:0.19339,Q960E3_DROME/56-380:0.27572):0.10009,MCM6_CAEEL/333-660:0.22489):0.11055,Q8SRX5_ENCCU/300-624:0.43269):0.09554,Q8H1A3_PEA/330-651:0.35849):0.07342):0.04784,(MCM6_YEAST/512-836:0.18140,MCM6_SCHPO/413-737:0.23214):0.10308):0.10868,(Q7YY63_CRYPV/268-626:0.27616,Q8IDF0_PLAF7/423-751:0.26843):0.08680):0.09609):0.03493,(((((MCM4_SCHPO/480-811:0.20320,(Q7SHS5_NEUCR/580-912:0.29404,CDC54_YEAST/505-834:0.19421):0.06671):0.09138,(((MCM4_DROME/447-772:0.25426,Q95XQ8_CAEEL/404-730:0.26183):0.07623,O42589_XENLA/440-765:0.22623):0.13097,(Q7R0J9_GIALA/381-716:0.52432,Q8SSE5_ENCCU/304-622:0.33937):0.07437):0.11652):0.07078,Q86IF1_DICDI/469-792:0.22029):0.12374,((((PROL_ARATH/313-638:0.25674,(Q7Q6K1_ANOGA/318-640:0.27574,Q9U1E0_LEIMA/317-646:0.35755):0.15464):0.09361,Q7R0H3_GIALA/302-626:0.50938):0.05676,CDC47_YEAST/397-725:0.26818):0.10254,Q7RJM3_PLAYO/402-752:0.34295):0.12829):0.05494,(MCM3_ENTHI/167-531:0.39880,(((((((MCM2_DROME/445-780:0.24226,Q871F1_NEUCR/476-832:0.32411):0.06818,Q9XXI9_CAEEL/435-777:0.21205):0.08414,Q8SS42_ENCCU/362-688:0.36387):0.05940,Q9BI22_DUGJA/443-793:0.31873):0.06887,Q96275_ARATH/41-383:0.26556):0.08316,(MCM2_SCHPO/471-810:0.23149,MCM2_YEAST/480-846:0.22204):0.06869):0.10116,Q9U446_ENTHI/523-861:0.24402):0.10766):0.06566):0.03956):0.06877,((Q979U9_THEVO/274-612:0.32397,((Q7QSR9_GIALA/322-652:0.52200,(Q8ZY88_PYRAE/266-590:0.29372,(Q9YFR1_AERPE/280-607:0.29320,((O29733_ARCFU/151-494:0.24990,((Q8TWR7_METKA/251-570:0.27730,Q8TWB5_METKA/192-488:0.37638):0.28096,(Q8TJF6_METAC/263-611:0.35893,Q8PVX1_METMA/263-609:0.26113):0.09711):0.04739):0.06120,O27798_METTH/256-576:0.20782):0.07681):0.07307):0.10661):0.07904,(((Q8SQX1_ENCCU/273-608:0.42226,(MCM8_MOUSE/44-404:0.30251,Q9SF37_ARATH/336-678:0.33012):0.10522):0.15528,Q7QZN0_GIALA/424-793:0.51615):0.04286,(Q9ZPT4_ARATH/300-581:0.64035,Q8SRK9_ENCCU/211-526:0.48440):0.08740):0.10577):0.06763):0.10379,Q975E0_SULTO/138-460:0.25896):0.09244):0.23287,Y363_METJA/339-669:0.38576):0.08723,Y1489_METJA/271-595:0.21883,Y3513_METJA/258-581:0.46519);