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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00472 phylogeny
for nucleotide alignment


 
(((((((((RF1_BORBU/207-320,RF1_MYCCA/210-323),((RF1_AQUAE/210-323,Q46286_CLOPE/8-121),RF1_MYCGE/209-322)),((RF1_HELPY/206-318,RF1_RICPR/206-319),(((RF2_AQUAE/223-336,RF2_RICPR/223-336),(RF2_HELPY/224-335,(((RF2_BACSU/224-337,RF2_CHLTR/224-337),RF2_TREPA/218-331),(RF2_ECOLI/225-337,(RF2_STRCO/224-336,RF2_MYCLE/229-341))))),((((RF1_SYNY3/212-325,RF1M_HUMAN/286-399),((RF1_TREPA/206-319,(RF1_THETH/204-316,RF1_MYCLE/213-326)),RF1_BACSU/206-319)),((RF1_HAEIN/209-322,(RF1_ECOLI/208-321,RF1_COXBU/210-323)),RF1_CHLTR/208-321)),O80723_ARATH/242-355)))),RF1M_CAEEL/232-345),RF1M_KLULA/244-354),RF1M_SCHPO/245-356),RFH_ECOLI/35-141),(YOL4_YEAST/56-189,ICT1_HUMAN/63-194)),O66115_ZYMMO/3-134,YAEJ_ECOLI/1-132);
(((((((((RF1_BORBU/207-320:0.18352,RF1_MYCCA/210-323:0.17446):0.04029,((RF1_AQUAE/210-323:0.29691,Q46286_CLOPE/8-121:0.19860):0.07609,RF1_MYCGE/209-322:0.28355):0.04844):0.06924,((RF1_HELPY/206-318:0.37423,RF1_RICPR/206-319:0.18539):0.08978,(((RF2_AQUAE/223-336:0.32845,RF2_RICPR/223-336:0.24955):0.02721,(RF2_HELPY/224-335:0.29853,(((RF2_BACSU/224-337:0.21715,RF2_CHLTR/224-337:0.31043):0.06845,RF2_TREPA/218-331:0.33178):0.11882,(RF2_ECOLI/225-337:0.18248,(RF2_STRCO/224-336:0.12841,RF2_MYCLE/229-341:0.22532):0.24348):0.08484):0.07442):0.07420):0.22607,((((RF1_SYNY3/212-325:0.38106,RF1M_HUMAN/286-399:0.34553):0.11447,((RF1_TREPA/206-319:0.23825,(RF1_THETH/204-316:0.41217,RF1_MYCLE/213-326:0.28461):0.13457):0.07765,RF1_BACSU/206-319:0.26722):0.05840):0.07608,((RF1_HAEIN/209-322:0.19197,(RF1_ECOLI/208-321:0.21936,RF1_COXBU/210-323:0.25697):0.08187):0.13043,RF1_CHLTR/208-321:0.21833):0.08107):0.04118,O80723_ARATH/242-355:0.36791):0.00699):0.04005):0.03709):0.10602,RF1M_CAEEL/232-345:0.47089):0.09849,RF1M_KLULA/244-354:0.32911):0.10690,RF1M_SCHPO/245-356:0.28098):0.14899,RFH_ECOLI/35-141:0.78907):0.24496,(YOL4_YEAST/56-189:0.68193,ICT1_HUMAN/63-194:0.87263):0.24798):0.29223,O66115_ZYMMO/3-134:0.36216,YAEJ_ECOLI/1-132:0.64341);