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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00437 alignment
(23 sequences with 351 aa)


Q9X921_STRCO/173-461 AAEQLRSELVGSGPLEPLLADPSVTDVLVSAPDR-VWV-DRGGG--LELAPVSFPDAAAVRRLAQRLATVAGRRLDDARPWVDARLP----..-DGTRLHAVLPPVAVDC.TC--LALR--VVRPRAF-.TLRELAAAGTVP..........----------.------------PGGDRVLRALLRARLSFLVSGGTGSGKTTLL..SALLGLVGPD---ERIVLAEDSAELRP.DHPHVVRLETRPANQEGAGLVTLEDLVRQALRMRPDRLVVGEVRGPEVVHL-LAALNTGHEGGCGTVHANAAADVPARLEALGTTAG--..LNRAALHSQLAAALSVVLHLVRDR
Q9KY93_STRCO/74-363 LIRRVVDEALGLGILEPLLEDASITEIMVNGPDA-IFV-ERAGR--VEQLPLRFASHDQLMQTIERIVSTVNRRVDESNPMVDARLP----..-SGERVNVIIPPLSLTG.AT--LTIR---RFPRSF-.TLQELIGLGSLD..........----------.------------ENMLYLLAGLVQARFNIIVSGATGTGKTTLL..NALSGLIPES---DRIITIEDSAELQL.QQAHVIRLESRPPNVEGQGRITIRDLVRNSLRMRPDRIVVGEVRGGESLDM-LQAMSTGHDGSLATVHANSAEDALMRLQTLASMSDVE..IPFVALHDQINSSVDVLIQLTRFA
Q9HW98_PSEAE/79-369 LAEEVVDELTGFGPLEILLRDPGVSEILVNGPGR-VFV-EREGR--LYQSDLRFIDDHHVLRVIQRILAPLGRRLDESSPMVDARLP----..-DGSRVNAIIPPVALDG.PC--ISIR--KFSQELL-.RSADLLAYQSVD..........----------.------------EALLEFLRQAVSRRCNILISGGTGTGKTTLL..NVISGFIDER---ERIVTIEDTAELQL.GHDHVVRLETRPPNAEGYGEVTARDLIRNALRMRPDRIILGEIRGVEVLDV-LQAMNTGHDGSMSTVHANSAMDSLLRMEMLVGLTGNR..LPEQTLRLMICAALDVVVQITRLA
Q98P49_RHILO/12-293 ARSSRMLRTALGPAIARFLDDPAIVEVMLNPDGR-IWV-DFLSN--GLADTGEMLAPAAGERIVRLVAHHVGAEVHSRSPRVSAELP----..QTGERFEGLLPPVVAA-.PA--FAIR--KPAVAVF-.TLDDYVAAGTMS..........----------.------------AGQAAILRAAVAVRANILVAGGTSTGKTTLT..NALLAEVAKG--TDRVVLIEDTRELQC.AAPNLVAMRTK------DGVATLSDLVRSSLRLRPDRIPIGEVRGAEALDL-LKAWGTGHPGGIGTLHAGSGIGALRRLEQLIQE----..AVVTVPRALIADTIGLVAVLAGRG
Q989J4_RHILO/9-289 HRRRAMLRTAMGPTITEALADPLVIEVMVNPDGA-LRL-DRLGE--GRIDTAVHMHPSEAERIIRLVASHVRAEAHADNPIVSAELP----..-SGERFEGLLPPVVLA-.PC--FAIR--KPAAKLY-.TLANYVADRIML..........----------.------------PLQADALIKAVRERRNILVAGGTSSGKTTLA..NALLAEVAEC--DERVILIEDTRELQC.AAKDCVALRTR------RGSVTLADLVRSTLRLRPDRIIVGEVRGAEALDM-LKAWNTGHPGGIATVHANSARSALYRIEQLAQE----..AVVTVPRRLIADAIDLIVFIAGRG
Q9F5C2_AGRRH/8-289 PRLVRKLQEALGDQLCVALDDATVVEIMLNPDGK-LFI-ERLGH---GVAPAGEMSSAAAEMVIGTVAHALQSEVDTEQPIISGELP----..IGGHRFEGLLPPVVAK-.PA--FTIR--RRASRLI-.PLEDYVRTGVMT..........----------.------------EYQASTIRSAISARLNIVISGGTGSGKTTLA..NAVIDEIVKSAPEDRLVILEDTAEIQC.TAENAVLLHTS-------DTIDMARLLKSTMRLRPDRIVVGEVRDGAALTL-LKAWNTGHPGGVATIHSNTAMSALRRLEQLTAE----..ASQQPMHEVIGEAVDLVISIERTP
Q60209_9ZZZZ/1-274 ----------MGADLLAALNDPKTVEVMLNADGK-VWH-ERLGE---PMRYICDMRPSQSQAIIETVAGFHGKEVTRHSPILEGEFP----..LDGSRFAGQLPPVVAA-.PT--FAIR--KRAVAIF-.TLEQYVEAGIMT..........----------.------------REQYEVIKSAVAAHRNILVIGGTGSGKTTLV..NAIINEMVAFNPSERVVIIEDTGEIQC.AAENAVQYHTS-------IDVSMTLLLKTTLRMRPDRILVGEVRGPEALDL-LMAWNTGHEGGAATLHANNPKAGLSRLAMLISMHP--..DSPKPIEPLIGEAVHVVVHIARTP
Q9ZDN5_RICPR/3-313 --EEFAALETFLLPFKNLFAEEGINEIMVNKPGE-AWV-EKRGD--IYSKQIPELDSDHLLALGRLVAQSTEQMISEEKPLLSATLP----..-NGYRIQIVFPPACEIGqII--YSIR--KPSGMNL-.TLDEYAQMGAFD..........--NTATESLVdEDADILNNFLAEKKIKEFIRYAVISKKNIIISGGTSTGKTTFT..NAALTEIPAI---ERLITVEDAREVVLsSHPNRVHLLAS-KGGQGRANVTTQDLIEACLRLRPDRIIVGELRGKEAFSF-LRAINTGHPGSISTLHADSPAMAIEQLKLMVMQADFG..MPPEEVKKYILSVVDIVVQLKRAS
Q981R8_RHILO/3-317 GQQRTVFLNKALEPVRRWLDDDRVVEICANGPGL-VWV-EIVGSTHMEPFDVPELDRAAITYLMERIAASSSQSISEENPLLSAALP----..-GGERFQGVLAPATPTG.GA--FAIR--KQVVKDM-.RLDDYRKRGSFD..........TISVQDPGELsETDSALCEYLDAGKIEDFLRLAVRERYSILLSGGTSSGKTTFL..NAILHEVPSD---ERILTIEDTREVKP.RQPNYLPLVVS-KGDQGLAHVTVETLLQAAMRLRPDRIFLGEIRGAEAYSF-LRAVNTGHPGSITTIHADSPTGAFEQLALMVMQAGLG..LRKAEIIDYVRAVLPIVIQQTRRG
Q9A5M4_CAUCR/3-310 ---TGVYLAAYLAPLQPWLDRADVTDIWVNRPGE-VWIETTKGV--TSRLAAPDLTDQALQRLARQIAAASHQGVSREQPLLSASLP----..-NGARVQIIAPPATRGD.LA--LAIR--KHTLSDL-.SLSDLAIGGTLA..........---PPALTGRaDADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLL..NALVKEIPAH---ERLVLIEDAPEIQL.RHENAIGLIAA-RSDTGEAQVDAEDLLQASLRMRPDRILLGELRGREAFAF-LRAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVD..LGWDTVRNYVRQVVDIVVQLNRVG
Q9RNC7_BARHE/9-334 SDETVAIVLTKLEPISTFLKDENLFEIVINRPYQ-VMT-EGVEG--WKTIETPALSFNELMGIAKVVASYSKQNISEKNPILSATLP----..-GNERIQIVIPPAVEKNtIS--MTIR--KPSSRSF-.SLEDLANKGLFSvceqvsftplNNYLSHLSELkHIDHDLVRAYAKKDFVFFLNQAVQCQKNILIAGKTGSGKTTLS..KALIAKIPDD---ERIITIEDTPELVV.PQPNYVSMIYS-KDGQGLASVGPKELLESALRMRPDRILLQELRDGTAFYY-IRNVNSGHPGSITTVHASTALAAFEQMTLLVKESEGGgdLERDDIRGLLISMIDIIIQCKRIE
TCPT_VIBCH/81-378 KDLSFIEKDIMKIASSAT--AYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVIN..EKAYRFRYAHMPLFGEGgKNYHAVVRIIYPSNNFVCtNYQDIGYNEADT..........----------.------------DAIARILNTS---YGLFIVSGTTGSGKSTSLkkYIELLFFNKYKGKGCFVTVEDPVEYLI.SGAQQSSIVAD---NDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYC-LTTIHAGSVVSVLQRLSGLG------..MKADKIASPGFLAGITSQKLIPEL
COMGA_BACSU/3-277 ----SIEKVSKNLIEEAY--LTKASDIHIVPRERDAIIHFRVDH---ALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLTLKLK..EGNVHLRMSTLPTINE-.ES--LVIRVMPQYNIP--.SIDKLSLFPKTG..........----------.------------ATLLSFLKHS---HGMLIFTGPTGSGKTTTL..YSLVQYAKKH-FNRNIVTLEDPVETRD.EDVLQVQVNEK-------AGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLV-LTSLHTRDAKGAIYRLLEFG------..INMNEIEQTVIAI--AAQRLVDLA
HOFB_ECOLI/76-354 EKHQPKAELLTRTLQSAL--EQRASDIHIEPADNAYRIRLRIDG---VLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELA..GNAVSFRIATLPCRGG-.EK--VVLRLLQQVGQAL-.DVNTLGMQPLQL..........----------.------------ADFAHALQQP---QGLVLVTGPTGSGKTVTL..YSALQKLNTA--DINICSVEDPVEIPI.AGLNQTQIHPR-------AGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLV-LSTLHTNSTCETLVRLQQMG------..VARWMLSSALTLV--IAQRLVRKL
HOFB_HAEIN/117-396 EDDEPVIRLLNQIFESAL--QKNASDIHLETLADQFQVRFRIDG---VLQPQPLISKIFANRIISRLKLLAKLDISENRLPQDGRFQFKTT.fSDILDFRLSTLPTHWG-.EK--IVLRAQQNKPVEL-.SFSELGMTENQQ..........----------.------------QAFQRVLSQP---QGLILVTGPTGSGKSISL..YTALQWLNTP--DKHIMTAEDPIEIEL.DGIIQSQINPQ-------IGLDFNRLLRTFLRQDPDIIMLGEIRDEESAMIALRAAQTGHLV-LSTLHTNDAISAISRLQQLG------..IQQYEIKNSLLLV--IAQRLVRKL
PILF_NEIGO/167-447 AEDGPVPRFIHKTLSDAL--RSGASDIHFEFYEHNARIRFRVDG---QLREVVQPPIAVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQkgGKPVDFRVSTLPTLFG-.EK--VVMRILNSDAASL-.NIDQLGFEPFQK..........----------.------------KLLLEAIHRP---YGMVLVTGPTGSGKTVSL..YTCLNILNTE--SVNIATAEDPAEINL.PGINQVNVNDK-------QGLTFAAALKSFLRQDPDIIMVGEIRDLETADIAIKAAQTGHMV-FSTLHTNNAPATLSRMLNMG------..VAPFNIASSVSLI--MAQRLLRRL
TAPB_AERHY/180-459 DDDAPIVKYINKIMMDAI--KRGASDLHFEPYETKYRIRFRIDG---ILHEIATPPVNLANRFSARLKVMARLDIAERRLPQDGRIKLKLS.rNKSMDMRVNTLPTMWG-.EK--IVIRLLDSSAARL-.NIEQLGFDDRQK..........----------.------------AQYLRALSKP---QGMILVTGPTGSGKTVSL..YTGLNILNTT--EVNISTAEDPVEINL.PGVNQVQVNPK-------AGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLV-LSTLHTNSAAETLTRMMNMG------..VPAFNIASSVTLI--MAQRLARKL
PILB_PSEAE/179-458 ADDAPVVRFVNKMLLDAI--KGGSSDLHFEPYEKIYRVRFRTDG---MLHEVAKPPIQLASRISARLKVMAGLDISERRKPQDGRIKMRVS.kTKSIDFRVNTLPTLWG-.EK--IVMRILDSSSAQM-.GIDALGYEEDQK..........----------.------------ELYLAALKQP---QGMILVTGPTGSGKTVSL..YTGLNILNTT--DINISTAEDPVEINL.EGINQVNVNPR-------QGMDFSQALRAFLRQDPDVIMVGEIRDLETAEIAIKAAQTGHMV-MSTLHTNSAAETLTRLLNMG------..VPAFNLATSVNLI--IAQRLARKL
GSPE_ECOLI/103-381 DSAAPVIRLINAILSEAI--KETASDIHIETYEKTMSIRFRIDG---VLRTILQPNKKLAALLISRIKVMARLDIAEKRIPQDGRISLRIG..RRNIDVRVSTLPSIYG-.ER--AVLRLLDKNSLQL-.SLNNLGMTAADK..........----------.------------QDLENLIQLP---HGIILVTGPTGSGKSTTL..YAILSALNTP--GRNILTVEDPVEYEL.EGIGQTQVNTR-------VDMSFARGLRAILRQDPDVVMVGEIRDTETAQIAVQASLTGHLV-LSTLHTNSASGAVTRLRDMG------..VESFLLSSSLAGI--IAQRLVRRL
GSPE_KLEPN/109-387 EDDAPIIRLINAMLTEAI--KEKASDIHIETYERHLQIRFRVDG---VLREILRPQRRLAALLISRIKVMASLDIAEKRIPQDGRMALRIG..GRAVDVRVSTLPSSYG-.ER--VVLRLLDKNSVNL-.DLLTLGMTPALL..........----------.------------RQVDGLIARP---HGIVLVTGPTGSGKSTTL..YAALSRLDAR--ERNIMTIEDPIEYEL.EGIGQTQVNAK-------VDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLV-LSTLHTNSALGAISRLQDMG------..VEPFLLSTSLLAV--MSQRLVRRL
GSPE_AERHY/116-394 DDDAPIIRLINAMLSEAI--KEEASDIHIETFERVLVIRFRIDG---VLREILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIG..GRAVDVRVSTMPSSYG-.ER--VVLRLLDKNNVRL-.ELKQLGMTLANR..........----------.------------NIISELIRKP---HGIILVTGPTGSGKSTTL..YAALSEINSR--DRNILTVEDPIEYDL.EGVGQTQVNTK-------VDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLV-MSTLHTNTAIGAITRMRDMG------..IEPFLLSSSLLAV--LAQRLVRTL
GSPE_PSEAE/117-395 EDDAPIIRLINAILGEAI--RENASDIHLETFEKRLVVRFRVDG---VLREVLEPKRELAALLVSRIKVMARLDIAEKRIPQDGRISLRVG..GREVDIRVSTLPSANG-.ER--VVLRLLDKQAGRL-.NLQHLGMSERDR..........----------.------------KLMDETVRKP---HGILLVTGPTGSGKTTTL..YASLTTLNDR--TRNILTVEDPIEYHL.EGIGQTQVNAK-------VDMTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASLTGHLV-LSTLHTNSAIGAITRLVDMG------..IEPFLLSSSMLGV--LAQRLVRVL
GSPE_XANCP/179-457 ASEAPVIRLVNLVIQHAV--ELRASDIHIEPFESRLKVRYRVDG---VLVEGESPPAKLTAAVISRIKIMAKLNIAERRLPQDGRIMLRVQ..GKELDLRVSTVPTAHG-.ES--VVMRLLDRETVVF-.DFYKLGFTEDFL..........----------.------------PQFRKVLEQP---HGIMLVTGPTGSGKTTTL..YTALSQLNTS--DVKIITVEDPVEYQI.EGINQIQAKPQ-------IGLDFANALRSIVRQDPDIIMIGEMRDLETARIAIQSALTGHLV-LSTLHTNNAAGGITRLLDMG------..VEDYLLTSTINGI--LAQRLVRKL