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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00436 phylogeny
for nucleotide alignment


 
((((((((((((((SSB_PSEAE/4-111,((SSB_NEIMB/3-106,((SSB_BPP1/6-113,((O82908_ECO57/6-112,SSB2_SALTI/6-113),((SSB_BUCAI/6-113,(SSB_RICPR/5-114,Q9EZL8_CYTJO/5-109)),SSB_VIBCH/6-114))),SSB_SHEHA/6-110)),Q9F278_ACTAC/4-108)),((SSB_RHILO/5-114,SSB_CAUCR/5-114),SSB_RHIME/5-114)),(Q9PCW1_XYLFA/5-108,SSB1_XYLFA/4-108)),((((SSB1_STRCO/1-106,((SSB2_STRCO/4-109,SSB_MYCSM/4-109),Q9X552_CORGL/1-105)),SSB_THETH/128-226),(SSB_THEAQ/5-107,SSB_THETH/5-107)),(Q02327_9ZZZZ/3-105,P71177_ENTAE/3-104))),SSB_DROME/38-141),((SSB_MOUSE/30-138,(Q9LII1_ARATH/80-197,SSB_ARATH/71-176)),YNA1_CAEEL/54-159)),SSB_SYNY3/3-103),(O74715_CANPA/18-118,(RIM1_YEAST/19-116,O14087_SCHPO/25-124))),((((SSB_CAMJE/2-104,SSB_HELPJ/2-105),SSB_AQUAE/2-104),(((Q9KKD0_BORHE/4-107,SSB_BORBU/4-107),SSB_TREPA/4-105),((((Q9B0G2_9CAUD/1-101,Q38144_BPSPP/1-103),((P94590_BACSU/2-103,((O80084_9CAUD/2-103,Q99WL1_STAAM/2-103),SSB_BACHD/2-103)),(((O32777_9LACT/6-110,Q9F1I4_ENTFA/1-102),(Q99SG1_STAAM/2-101,O54492_STACA/2-102)),((Q9QUF5_9ZZZZ/1-102,Q60056_9BACT/2-103),((Q9CFP4_LACLA/2-103,Q9FDF5_STRPY/2-103),Q9F1G6_ENTFA/2-103))))),(((SSB1_CLOAB/1-103,SSB_MYCPU/1-100),SSB3_CLOAB/1-102),Q9CIG8_LACLA/1-102)),((Q07715_STAAU/2-94,Q9ZNM6_9MOLU/2-99),(SSB_UREPA/1-98,(SSB_MYCPN/1-102,SSB_MYCGE/1-98)))))),SSB_THEMA/4-107)),(O83332_TREPA/22-122,P73145_SYNY3/1-99)),Q97GI5_CLOAB/106-204),(PRIB_PASMU/9-107,PRIB_VIBCH/2-97)),(Q75H70_ORYSA/56-158,Q9SX99_ARATH/56-154)),O49428_ARATH/99-194,Q8GWJ4_ARATH/82-177);
((((((((((((((SSB_PSEAE/4-111:0.09148,((SSB_NEIMB/3-106:0.28942,((SSB_BPP1/6-113:0.17617,((O82908_ECO57/6-112:0.25442,SSB2_SALTI/6-113:0.17913):0.06261,((SSB_BUCAI/6-113:0.07802,(SSB_RICPR/5-114:0.31319,Q9EZL8_CYTJO/5-109:0.48226):0.16307):0.13595,SSB_VIBCH/6-114:0.13484):0.10387):0.03596):0.09858,SSB_SHEHA/6-110:0.22422):0.07608):0.04639,Q9F278_ACTAC/4-108:0.30439):0.08766):0.04426,((SSB_RHILO/5-114:0.09844,SSB_CAUCR/5-114:0.16800):0.04433,SSB_RHIME/5-114:0.19243):0.18926):0.03076,(Q9PCW1_XYLFA/5-108:0.31507,SSB1_XYLFA/4-108:0.25619):0.05100):0.04718,((((SSB1_STRCO/1-106:0.32828,((SSB2_STRCO/4-109:0.11442,SSB_MYCSM/4-109:0.24946):0.13197,Q9X552_CORGL/1-105:0.65098):0.10329):0.12312,SSB_THETH/128-226:0.31475):0.08109,(SSB_THEAQ/5-107:0.10869,SSB_THETH/5-107:0.15057):0.31398):0.07273,(Q02327_9ZZZZ/3-105:0.16183,P71177_ENTAE/3-104:0.17375):0.33781):0.10305):0.16919,SSB_DROME/38-141:0.48272):0.10655,((SSB_MOUSE/30-138:0.46212,(Q9LII1_ARATH/80-197:0.39518,SSB_ARATH/71-176:0.50076):0.27667):0.14921,YNA1_CAEEL/54-159:0.56214):0.12999):0.15507,SSB_SYNY3/3-103:0.45209):0.04470,(O74715_CANPA/18-118:0.48743,(RIM1_YEAST/19-116:0.54833,O14087_SCHPO/25-124:0.68492):0.20950):0.32937):0.03130,((((SSB_CAMJE/2-104:0.27581,SSB_HELPJ/2-105:0.40774):0.15820,SSB_AQUAE/2-104:0.42628):0.09487,(((Q9KKD0_BORHE/4-107:0.27804,SSB_BORBU/4-107:0.13593):0.17132,SSB_TREPA/4-105:0.49550):0.14141,((((Q9B0G2_9CAUD/1-101:0.27938,Q38144_BPSPP/1-103:0.35389):0.22953,((P94590_BACSU/2-103:0.32989,((O80084_9CAUD/2-103:0.22270,Q99WL1_STAAM/2-103:0.10260):0.14768,SSB_BACHD/2-103:0.16100):0.08905):0.08437,(((O32777_9LACT/6-110:0.70978,Q9F1I4_ENTFA/1-102:0.32377):0.10279,(Q99SG1_STAAM/2-101:0.18871,O54492_STACA/2-102:0.20733):0.34416):0.09090,((Q9QUF5_9ZZZZ/1-102:0.28710,Q60056_9BACT/2-103:0.18515):0.10414,((Q9CFP4_LACLA/2-103:0.18791,Q9FDF5_STRPY/2-103:0.16445):0.07470,Q9F1G6_ENTFA/2-103:0.22197):0.04383):0.03994):0.04243):0.08459):0.04230,(((SSB1_CLOAB/1-103:0.21780,SSB_MYCPU/1-100:0.48158):0.07117,SSB3_CLOAB/1-102:0.21690):0.03789,Q9CIG8_LACLA/1-102:0.43804):0.04943):0.06315,((Q07715_STAAU/2-94:0.29037,Q9ZNM6_9MOLU/2-99:0.37449):0.14096,(SSB_UREPA/1-98:0.22895,(SSB_MYCPN/1-102:0.21076,SSB_MYCGE/1-98:0.27187):0.53682):0.15328):0.04838):0.16664):0.11601):0.05782,SSB_THEMA/4-107:0.53653):0.06363):0.13550,(O83332_TREPA/22-122:0.76039,P73145_SYNY3/1-99:0.52182):0.23449):0.19971,Q97GI5_CLOAB/106-204:0.90758):0.09513,(PRIB_PASMU/9-107:0.31271,PRIB_VIBCH/2-97:0.34357):0.49430):0.35253,(Q75H70_ORYSA/56-158:0.53068,Q9SX99_ARATH/56-154:0.46945):0.17161):0.41139,O49428_ARATH/99-194:0.13278,Q8GWJ4_ARATH/82-177:0.07788);