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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00393 phylogeny
for nucleotide alignment


 
((((((6PGD_STAAS/178-466,(Q8CXN9_OCEIH/178-468,(((Q88WS6_LACPL/182-475,Q836Q9_ENTFA/179-470),Q71ZU4_LISMF/178-468),O66227_ECOLI/179-467))),(((Q8TA03_DICDI/183-480,((6PGD_CANAL/204-504,6PGD_CUNEL/182-472),(((6PGD_CERCA/180-468,Q17761_CAEEL/179-471),(6PGD_SHEEP/179-469,(Q7SFZ4_NEUCR/212-510,(((((Q7NLK6_GLOVI/192-482,(Q8YLM3_ANASP/179-469,6PGD_SYNY3/189-481)),((Q83G38_TROWT/177-468,Q8EFR5_SHEON/206-499),Q8TA04_TRIVA/158-442)),((((((O22111_SOYBN/184-478,Q7Y248_ORYSA/168-466),(Q8SAQ8_PHYIN/182-472,Q9SME1_9PHAE/183-473)),Q8SAQ6_CHLRE/182-474),Q8SAQ5_PORYE/41-338),Q6TUM2_LEIME/182-476),((((Q6A799_PROAC/184-473,(O32911_MYCLE/189-478,Q6NHC5_CORDI/183-476)),(Q826E4_STRAW/181-471,Q6ADQ1_LEIXX/183-473)),Q8G729_BIFLO/181-475),((Q8FXG6_BRUSU/180-469,Q98GH7_RHILO/180-470),Q8UF73_AGRT5/180-470)))),Q8SAQ4_PORYE/75-372),(Q8SRX1_ENCCU/178-458,(6PGD_TREPA/179-475,Q8A8E5_BACTN/188-478)))))),6PGD_SCHPO/183-479))),(((6PGD_CHLTR/180-472,(Q823H8_CHLCV/180-472,6PGD_CHLPN/178-470)),(O51509_BORBU/175-464,Q6MEF8_PARUW/181-471)),Q6LS71_PHOPR/196-486)),6PGD_BACSU/177-467)),Q6HPK6_BACHK/178-469),(Q893F9_CLOTE/178-468,(Q7VRX5_CANBF/180-472,((6PGD_BUCBP/178-467,6PGD_BUCAI/178-467),Q6UA37_9ENTR/194-483)))),Q74H97_LACJO/176-459),Q7VC99_PROMA/179-471,Q7V1T5_PROMP/179-471);
((((((6PGD_STAAS/178-466:0.18743,(Q8CXN9_OCEIH/178-468:0.21045,(((Q88WS6_LACPL/182-475:0.32725,Q836Q9_ENTFA/179-470:0.10666):0.09796,Q71ZU4_LISMF/178-468:0.18764):0.04299,O66227_ECOLI/179-467:0.30081):0.05072):0.03377):0.04219,(((Q8TA03_DICDI/183-480:0.29477,((6PGD_CANAL/204-504:0.22853,6PGD_CUNEL/182-472:0.16972):0.03289,(((6PGD_CERCA/180-468:0.21385,Q17761_CAEEL/179-471:0.27098):0.06608,(6PGD_SHEEP/179-469:0.26186,(Q7SFZ4_NEUCR/212-510:0.16128,(((((Q7NLK6_GLOVI/192-482:0.18011,(Q8YLM3_ANASP/179-469:0.22158,6PGD_SYNY3/189-481:0.20842):0.15188):0.09029,((Q83G38_TROWT/177-468:0.44580,Q8EFR5_SHEON/206-499:0.41158):0.08515,Q8TA04_TRIVA/158-442:0.39615):0.07742):0.05544,((((((O22111_SOYBN/184-478:0.28161,Q7Y248_ORYSA/168-466:0.17190):0.16848,(Q8SAQ8_PHYIN/182-472:0.17682,Q9SME1_9PHAE/183-473:0.22180):0.04977):0.05854,Q8SAQ6_CHLRE/182-474:0.15130):0.04441,Q8SAQ5_PORYE/41-338:0.25448):0.06131,Q6TUM2_LEIME/182-476:0.52732):0.05740,((((Q6A799_PROAC/184-473:0.34416,(O32911_MYCLE/189-478:0.21198,Q6NHC5_CORDI/183-476:0.30670):0.07525):0.05827,(Q826E4_STRAW/181-471:0.17952,Q6ADQ1_LEIXX/183-473:0.19629):0.04412):0.04355,Q8G729_BIFLO/181-475:0.24341):0.05144,((Q8FXG6_BRUSU/180-469:0.27990,Q98GH7_RHILO/180-470:0.15413):0.03853,Q8UF73_AGRT5/180-470:0.17794):0.20254):0.03674):0.04328):0.10080,Q8SAQ4_PORYE/75-372:0.21818):0.04136,(Q8SRX1_ENCCU/178-458:0.67718,(6PGD_TREPA/179-475:0.32233,Q8A8E5_BACTN/188-478:0.28766):0.09897):0.10050):0.07017):0.06137):0.09857):0.07038,6PGD_SCHPO/183-479:0.19620):0.05907):0.09376):0.06578,(((6PGD_CHLTR/180-472:0.24295,(Q823H8_CHLCV/180-472:0.18346,6PGD_CHLPN/178-470:0.21022):0.11314):0.22584,(O51509_BORBU/175-464:0.32620,Q6MEF8_PARUW/181-471:0.20847):0.04969):0.04017,Q6LS71_PHOPR/196-486:0.32548):0.03454):0.08333,6PGD_BACSU/177-467:0.45204):0.04190):0.03809,Q6HPK6_BACHK/178-469:0.20414):0.07821,(Q893F9_CLOTE/178-468:0.32321,(Q7VRX5_CANBF/180-472:0.25571,((6PGD_BUCBP/178-467:0.18917,6PGD_BUCAI/178-467:0.17134):0.04535,Q6UA37_9ENTR/194-483:0.13773):0.04360):0.04932):0.05331):0.09463,Q74H97_LACJO/176-459:0.39944):0.26641,Q7VC99_PROMA/179-471:0.21417,Q7V1T5_PROMP/179-471:0.21255);