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Protein and Associated NucleotideDomains with Inferred Trees

PF00355 phylogeny
for restricted amino acid alignment


 
((Q9Y8S0_AERPE/89-185,(((((Q44294_9NOST/37-127,P74174_SYNY3/34-125),((UCRI_ANASP/64-155,((P95521_PHOLA/61-153,(UCRI_NOSSP/64-156,((Q9XFU4_9CHLO/52-142,UCRI_CHLRE/90-182),Q9ZR03_ARATH/113-205))),Q9X9T2_SYNEL/64-156)),(((((UCRI_PARDE/92-182,UCRI_RHOSH/88-179),(Q9ZIA5_BRUAB/88-179,Q9RQG1_RHIGA/93-184)),(((Q42703_CHLRE/161-253,UCR3_TOBAC/168-260),((Q27785_9TRYP/194-287,((UCRI_RICPR/75-169,UCRI_BRAJA/74-168),UCRI_RHORU/77-174)),(O44512_CAEEL/175-267,UCRI_HUMAN/174-266))),UCRI_NEUCR/131-223)),UCRI_CHRVI/89-193),(Q53766_SULAC/96-204,Q9YB73_AERPE/97-209)))),(P73872_SYNY3/324-415,((UCRI_CHLLT/82-173,(Q9Z510_STRCO/43-133,(O52396_THETH/89-185,(Q9ZGG1_HELMO/45-140,Q9RX80_DEIRA/39-135)))),((Q9RIX7_STRCO/52-144,P73355_SYNY3/49-145),((((YEAW_ECOLI/46-140,((O53311_MYCTU/52-146,O52833_BORBR/39-142),(CHMO_SPIOL/119-216,(((((((BENA_ACIAD/52-155,Q9R9Z6_PSEPU/45-148),(CBDA_BURCE/54-157,Q9RLI6_PSEAE/45-148)),O85673_ACIAD/50-149),Q51592_BURCE/55-157),(O85989_SPHAR/58-160,Q9Z4T7_9SPHN/58-160)),(((Q9X4W9_9PSED/48-150,(Q9R6Z7_NOCSK/48-149,Q9X593_9NOCA/45-146)),(((O86909_9SPHN/63-164,O85966_SPHAR/45-146),O86913_9SPHN/67-168),(((((BPHA_BURCE/56-163,Q46155_9GAMM/49-150),P72256_RHOER/55-155),O69363_RHOER/37-138),(O86899_9SPHN/42-140,O85283_9SPHN/32-133)),((((Q9WXG8_ALCFA/43-143,(Q9ZHH3_9BURK/39-140,Q9ZFH6_9PROT/1-95)),O85843_SPHAR/37-137),O85964_SPHAR/38-139),HCAE_ECOLI/42-143)))),((Q51974_PSEPU/41-142,Q9XDW6_RHOPA/42-143),(Q44251_ACISP/35-135,P95531_PSEPU/51-151)))),((O86905_9SPHN/56-155,O85959_SPHAR/38-137),((O85986_SPHAR/40-142,((O87618_PSEAE/45-149,Q9Z5W0_PSEAE/40-140),O85993_SPHAR/44-144)),(Q9RBG5_9BURK/28-125,Q9X404_9RHIZ/43-148))))))),P95856_SULSO/1-93),(P71875_MYCTU/25-120,((P74141_SYNY3/23-123,((O24841_ACIAD/6-103,(P94679_COMTE/6-105,O88036_STRCO/11-112)),((((O88158_PSEST/28-131,O05935_PSEPU/43-146),(O54095_STRCO/5-107,((Q9X162_THEMA/1-102,Q9X110_THEMA/5-109),O24847_ACIAD/25-126))),(Q9SK50_ARATH/87-189,(Q9SZZ3_ARATH/84-185,(P73738_SYNY3/33-131,(PAO_ARATH/87-188,O04127_MAIZE/19-120))))),((Q9XDZ5_PRODI/1-90,((Q9XJ38_DUNSA/133-231,Q9ZWM5_CHLRE/122-220),((Q9XJ40_ORYSA/34-131,Q9SPF2_ARATH/220-317),Q9XJ39_MARPO/1-90))),Q9XDZ6_PROHO/1-90)))),(((Q9ZN84_PSEPA/26-122,(PHT3_PSEPU/26-130,POBA_PSEPS/44-145)),CBAA_COMTE/26-129),(((Q9RBU4_PSEPY/28-133,Q9RPG0_MYXFU/28-133),(P74496_SYNY3/13-112,P74403_SYNY3/56-154)),P73170_SYNY3/7-109))))),((((Q9URM3_PICAN/891-992,(Q9UVH8_HEBCY/939-1042,(NIR_EMENI/931-1036,O74998_PHANO/954-1059))),((Q9X2N0_STACA/2-97,NASE_BACSU/4-99),((Q9RBP0_9NOCA/5-100,(((O87800_PSEST/1-96,TMOC_PSEME/1-95),O07070_BURCE/1-95),O69180_ALCEU/1-95)),Q9ZET5_XANP2/11-107))),((O24846_ACIAD/2-95,(Q9XAD3_STRCO/2-95,(((((Q53124_RHOSR/2-95,Q57545_RHOGO/2-95),(P95568_9PSED/2-96,BPHA3_PSES1/2-96)),(O85285_9SPHN/2-95,HCAC_ECOLI/2-95)),(((Q9XDW3_RHOPA/11-102,Q51978_PSEPU/12-107),(((P95563_PSESP/4-97,NDOA_PSEPU/3-96),O87620_PSEAE/1-91),(O85777_RHILV/4-98,Q9R9P6_RHIME/4-98))),((O85991_SPHAR/3-97,Q9WXG5_ALCFA/13-107),O82822_PSEST/4-98))),(O86907_9SPHN/3-96,O69365_RHOER/19-111)))),(Q9RT19_DEIRA/3-96,(((O77266_DROME/16-109,Q9VJ03_DROME/10-102),O42346_XENLA/68-161),YDGE_SCHPO/17-114)))),P70752_9RHIZ/2-95)))))),((O07622_BACSU/417-509,O69839_STRCO/423-513),(Q9S237_STRCO/34-124,Q9XBV4_MYCSM/42-131))),((QCRA_BACSU/55-151,QCRA_BACTC/56-153),(O66460_AQUAE/66-167,Q9ZJ56_HELPJ/54-149)))),Q9RN80_STRAT/8-103,QCRA_STRLI/52-147);
((Q9Y8S0_AERPE/89-185:1.13573,(((((Q44294_9NOST/37-127:0.36526,P74174_SYNY3/34-125:0.39505):0.66088,((UCRI_ANASP/64-155:0.50883,((P95521_PHOLA/61-153:0.19408,(UCRI_NOSSP/64-156:0.24639,((Q9XFU4_9CHLO/52-142:0.29035,UCRI_CHLRE/90-182:0.11588):0.07035,Q9ZR03_ARATH/113-205:0.16061):0.07954):0.04951):0.08120,Q9X9T2_SYNEL/64-156:0.13057):0.20865):0.36409,(((((UCRI_PARDE/92-182:0.17424,UCRI_RHOSH/88-179:0.16735):0.11514,(Q9ZIA5_BRUAB/88-179:0.12211,Q9RQG1_RHIGA/93-184:0.14037):0.14791):0.29581,(((Q42703_CHLRE/161-253:0.28248,UCR3_TOBAC/168-260:0.16358):0.04531,((Q27785_9TRYP/194-287:0.48541,((UCRI_RICPR/75-169:0.32278,UCRI_BRAJA/74-168:0.13056):0.11374,UCRI_RHORU/77-174:0.17724):0.07905):0.11584,(O44512_CAEEL/175-267:0.25155,UCRI_HUMAN/174-266:0.12874):0.08521):0.05503):0.08860,UCRI_NEUCR/131-223:0.11358):0.20276):0.35745,UCRI_CHRVI/89-193:0.87050):0.75679,(Q53766_SULAC/96-204:0.53134,Q9YB73_AERPE/97-209:1.27414):0.48815):0.14623):0.13865):0.15569,(P73872_SYNY3/324-415:1.07513,((UCRI_CHLLT/82-173:0.51872,(Q9Z510_STRCO/43-133:0.75278,(O52396_THETH/89-185:0.52618,(Q9ZGG1_HELMO/45-140:0.64311,Q9RX80_DEIRA/39-135:0.99232):0.15081):0.26535):0.23906):0.09599,((Q9RIX7_STRCO/52-144:1.08479,P73355_SYNY3/49-145:0.83384):0.41579,((((YEAW_ECOLI/46-140:0.49152,((O53311_MYCTU/52-146:0.59729,O52833_BORBR/39-142:1.00362):0.24437,(CHMO_SPIOL/119-216:0.95115,(((((((BENA_ACIAD/52-155:0.10084,Q9R9Z6_PSEPU/45-148:0.14343):0.01897,(CBDA_BURCE/54-157:0.28140,Q9RLI6_PSEAE/45-148:0.12370):0.05862):0.18056,O85673_ACIAD/50-149:0.44484):0.13533,Q51592_BURCE/55-157:0.53811):0.06814,(O85989_SPHAR/58-160:0.19338,Q9Z4T7_9SPHN/58-160:0.13680):0.16474):0.16314,(((Q9X4W9_9PSED/48-150:0.63603,(Q9R6Z7_NOCSK/48-149:0.24554,Q9X593_9NOCA/45-146:0.22001):0.12304):0.13349,(((O86909_9SPHN/63-164:0.19824,O85966_SPHAR/45-146:0.38040):0.06352,O86913_9SPHN/67-168:0.46166):0.05736,(((((BPHA_BURCE/56-163:0.09147,Q46155_9GAMM/49-150:0.23135):0.11893,P72256_RHOER/55-155:0.16124):0.09026,O69363_RHOER/37-138:0.27099):0.02861,(O86899_9SPHN/42-140:0.32566,O85283_9SPHN/32-133:0.29473):0.06799):0.04911,((((Q9WXG8_ALCFA/43-143:0.16251,(Q9ZHH3_9BURK/39-140:0.16543,Q9ZFH6_9PROT/1-95:0.33887):0.10657):0.15168,O85843_SPHAR/37-137:0.28569):0.06204,O85964_SPHAR/38-139:0.20190):0.16428,HCAE_ECOLI/42-143:0.19959):0.08935):0.06506):0.10670):0.15084,((Q51974_PSEPU/41-142:0.34398,Q9XDW6_RHOPA/42-143:0.14800):0.54976,(Q44251_ACISP/35-135:0.46176,P95531_PSEPU/51-151:0.48250):0.08728):0.12560):0.05463):0.01423,((O86905_9SPHN/56-155:0.53335,O85959_SPHAR/38-137:0.36107):0.29951,((O85986_SPHAR/40-142:0.34349,((O87618_PSEAE/45-149:0.37718,Q9Z5W0_PSEAE/40-140:0.25021):0.16216,O85993_SPHAR/44-144:0.13217):0.08443):0.43788,(Q9RBG5_9BURK/28-125:0.37784,Q9X404_9RHIZ/43-148:0.67477):0.25707):0.06621):0.10483):0.25548):0.11566):0.18792):0.33769,P95856_SULSO/1-93:1.29438):0.19040,(P71875_MYCTU/25-120:1.19787,((P74141_SYNY3/23-123:0.48949,((O24841_ACIAD/6-103:0.58036,(P94679_COMTE/6-105:0.46974,O88036_STRCO/11-112:0.42184):0.24218):0.16764,((((O88158_PSEST/28-131:0.39518,O05935_PSEPU/43-146:0.37013):0.39607,(O54095_STRCO/5-107:0.54576,((Q9X162_THEMA/1-102:0.23560,Q9X110_THEMA/5-109:0.39238):0.16570,O24847_ACIAD/25-126:0.58915):0.13207):0.15301):0.06709,(Q9SK50_ARATH/87-189:0.52109,(Q9SZZ3_ARATH/84-185:0.55807,(P73738_SYNY3/33-131:0.36552,(PAO_ARATH/87-188:0.21518,O04127_MAIZE/19-120:0.15422):0.25932):0.08351):0.50825):0.15139):0.13637,((Q9XDZ5_PRODI/1-90:0.31622,((Q9XJ38_DUNSA/133-231:0.22255,Q9ZWM5_CHLRE/122-220:0.17928):0.23826,((Q9XJ40_ORYSA/34-131:0.08478,Q9SPF2_ARATH/220-317:0.11066):0.20900,Q9XJ39_MARPO/1-90:0.09872):0.10576):0.14928):0.11973,Q9XDZ6_PROHO/1-90:0.34409):0.49874):0.07972):0.05495):0.06291,(((Q9ZN84_PSEPA/26-122:0.92409,(PHT3_PSEPU/26-130:0.48436,POBA_PSEPS/44-145:0.56961):0.11200):0.08889,CBAA_COMTE/26-129:0.25135):0.38028,(((Q9RBU4_PSEPY/28-133:0.21779,Q9RPG0_MYXFU/28-133:0.24369):0.40587,(P74496_SYNY3/13-112:0.51604,P74403_SYNY3/56-154:0.53080):0.10312):0.24860,P73170_SYNY3/7-109:0.76540):0.08235):0.01750):0.27060):0.24269):0.02547,((((Q9URM3_PICAN/891-992:0.16662,(Q9UVH8_HEBCY/939-1042:0.69848,(NIR_EMENI/931-1036:0.12559,O74998_PHANO/954-1059:0.24624):0.28093):0.22954):0.60822,((Q9X2N0_STACA/2-97:0.38411,NASE_BACSU/4-99:0.42432):0.46308,((Q9RBP0_9NOCA/5-100:0.39888,(((O87800_PSEST/1-96:0.20812,TMOC_PSEME/1-95:0.39156):0.15796,O07070_BURCE/1-95:0.24920):0.01617,O69180_ALCEU/1-95:0.30442):0.34291):0.07928,Q9ZET5_XANP2/11-107:0.29046):0.79520):0.18701):0.32510,((O24846_ACIAD/2-95:0.62710,(Q9XAD3_STRCO/2-95:0.45048,(((((Q53124_RHOSR/2-95:0.26859,Q57545_RHOGO/2-95:0.27285):0.13800,(P95568_9PSED/2-96:0.20663,BPHA3_PSES1/2-96:0.10579):0.19033):0.21696,(O85285_9SPHN/2-95:0.51870,HCAC_ECOLI/2-95:0.43123):0.08645):0.05105,(((Q9XDW3_RHOPA/11-102:0.44341,Q51978_PSEPU/12-107:0.31687):0.17938,(((P95563_PSESP/4-97:0.06196,NDOA_PSEPU/3-96:0.21224):0.17455,O87620_PSEAE/1-91:0.20375):0.24115,(O85777_RHILV/4-98:0.12183,Q9R9P6_RHIME/4-98:0.04581):0.54299):0.12433):0.12630,((O85991_SPHAR/3-97:0.40873,Q9WXG5_ALCFA/13-107:0.51989):0.18126,O82822_PSEST/4-98:0.50077):0.08934):0.10359):0.10707,(O86907_9SPHN/3-96:0.60682,O69365_RHOER/19-111:0.65771):0.16604):0.17947):0.18135):0.16684,(Q9RT19_DEIRA/3-96:0.83988,(((O77266_DROME/16-109:0.35487,Q9VJ03_DROME/10-102:0.30770):0.17368,O42346_XENLA/68-161:0.25220):0.38912,YDGE_SCHPO/17-114:0.72574):0.50799):0.08949):0.05321):0.08020,P70752_9RHIZ/2-95:1.19153):0.13438):0.13687):0.40159):0.12502):0.16958):0.06726,((O07622_BACSU/417-509:0.54120,O69839_STRCO/423-513:0.35193):0.40177,(Q9S237_STRCO/34-124:0.24968,Q9XBV4_MYCSM/42-131:0.44556):0.50805):0.28336):0.25881,((QCRA_BACSU/55-151:0.05690,QCRA_BACTC/56-153:0.21772):0.88400,(O66460_AQUAE/66-167:0.52741,Q9ZJ56_HELPJ/54-149:1.03484):0.53775):0.22959):0.19245):0.89564,Q9RN80_STRAT/8-103:0.07839,QCRA_STRLI/52-147:0.01573);