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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00352 phylogeny
for restricted amino acid alignment


 
(((((((((TBP_METTL/2-87,TBP_ARCFU/3-88),(((TBPE_HALN1/5-90,(TBPC_HALN1/1-87,(TBPF_HALN1/5-90,TBPD_HALN1/5-90))),TBP_THEAC/4-89),TBP_METTH/3-88)),(TBP_SULSH/9-94,TBP_PYROC/18-103)),(((((((((Q9XG30_GUITH/161-247,TBP_PLAFA/138-227),(((TBP_SOLTU/110-196,TBP_DICDI/112-198),(TRF_DROME/136-222,((TBP_DROVI/260-346,Q07450_ONCVO/92-178),TBP_MOUSE/227-313))),Q9U7A4_ANTLO/171-257)),TBP_TETTH/138-224),TBP_ENTHI/141-227),(Q9GNY9_LEIMA/183-287,O74068_CERSY/97-181)),((((P90869_CAEEL/355-441,Q9XZP5_BRUMA/139-225),Q9BIE4_LEIDO/195-279),(Q8T052_DROME/288-375,TBPL1_HUMAN/97-182)),Q9VQE8_DROME/174-258)),(TBP_SULSH/100-185,TBP_PYROC/109-194)),TBP_THECE/3-88),((TBP_PYRWO/97-182,TBP_THEVO/95-182),((((TBPE_HALN1/96-183,(((TBPB_HALN1/96-183,TBPD_HALN1/96-183),TBPC_HALN1/94-181),O51971_HALN1/5-90)),TBP_ARCFU/94-181),(TBP_METJA/96-181,TBP_METTL/93-177)),TBP_METTH/94-179)))),TBP_PLAFA/47-132),(((TBP_ACECL/13-98,(Q12651_PNECA/51-136,Q9XG30_GUITH/70-155)),TBP_TETTH/48-133),TBP_ENTHI/52-136)),TRF_DROME/46-131),(TBPL1_HUMAN/8-92,Q8T052_DROME/199-283)),P90869_CAEEL/262-346,Q9XZP5_BRUMA/46-130);
(((((((((TBP_METTL/2-87:0.39560,TBP_ARCFU/3-88:0.31788):0.05485,(((TBPE_HALN1/5-90:0.15799,(TBPC_HALN1/1-87:1.12611,(TBPF_HALN1/5-90:0.04920,TBPD_HALN1/5-90:0.20683):0.10172):0.10178):0.22856,TBP_THEAC/4-89:0.26049):0.08153,TBP_METTH/3-88:0.36511):0.08330):0.08883,(TBP_SULSH/9-94:0.17280,TBP_PYROC/18-103:0.16868):0.36312):0.05267,(((((((((Q9XG30_GUITH/161-247:0.14765,TBP_PLAFA/138-227:0.55447):0.04770,(((TBP_SOLTU/110-196:0.10313,TBP_DICDI/112-198:0.22430):0.01975,(TRF_DROME/136-222:0.39838,((TBP_DROVI/260-346:0.22370,Q07450_ONCVO/92-178:0.20820):0.02616,TBP_MOUSE/227-313:0.03862):0.06204):0.08307):0.04917,Q9U7A4_ANTLO/171-257:0.11204):0.07202):0.11889,TBP_TETTH/138-224:0.30628):0.18466,TBP_ENTHI/141-227:0.37665):0.10759,(Q9GNY9_LEIMA/183-287:0.82274,O74068_CERSY/97-181:1.12660):0.46931):0.09929,((((P90869_CAEEL/355-441:0.29285,Q9XZP5_BRUMA/139-225:0.04725):0.13775,Q9BIE4_LEIDO/195-279:1.48338):0.18472,(Q8T052_DROME/288-375:0.26144,TBPL1_HUMAN/97-182:0.46248):0.16492):0.23797,Q9VQE8_DROME/174-258:1.39114):0.24190):0.32241,(TBP_SULSH/100-185:0.20107,TBP_PYROC/109-194:0.09051):0.18710):0.09198,TBP_THECE/3-88:0.43875):0.13643,((TBP_PYRWO/97-182:0.48475,TBP_THEVO/95-182:0.35126):0.07218,((((TBPE_HALN1/96-183:0.09687,(((TBPB_HALN1/96-183:0.12300,TBPD_HALN1/96-183:0.16536):0.08530,TBPC_HALN1/94-181:0.64072):0.05803,O51971_HALN1/5-90:0.38932):0.06365):0.11227,TBP_ARCFU/94-181:0.17923):0.10693,(TBP_METJA/96-181:0.07402,TBP_METTL/93-177:0.16521):0.20897):0.04171,TBP_METTH/94-179:0.17515):0.08483):0.09599):0.07764):0.27906,TBP_PLAFA/47-132:0.72083):0.22560,(((TBP_ACECL/13-98:0.14221,(Q12651_PNECA/51-136:0.10982,Q9XG30_GUITH/70-155:0.20898):0.05989):0.00888,TBP_TETTH/48-133:0.11927):0.12501,TBP_ENTHI/52-136:0.31296):0.13790):0.04422,TRF_DROME/46-131:0.38619):0.24900,(TBPL1_HUMAN/8-92:0.25689,Q8T052_DROME/199-283:0.25242):0.20601):0.72134,P90869_CAEEL/262-346:0.14715,Q9XZP5_BRUMA/46-130:0.24534);