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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00329 phylogeny
for restricted amino acid alignment


 
((((Q9G4B8_9STRA/85-152,NUGM_ACACA/97-162),((((NUGM_CANMA/150-217,Q9UUU0_YARLI/155-222),NUOC_RICPR/86-153),(Q9A6X2_CAUCR/88-155,(Q98KQ7_RHILO/89-156,NUOC1_RHIME/89-156))),(((Q9PGJ3_XYLFA/134-203,NUOC_NEIMB/94-163),NUOC_RHOCA/89-156),((NUOC2_RHIME/89-156,(O66826_AQUAE/105-172,O67335_AQUAE/86-152)),(((Q9KGW7_PSEFL/108-174,(Q9I0J9_PSEAE/107-174,(O85275_PECCC/112-179,NUOCD_BUCAI/113-180))),((O25852_HELPY/121-188,Q9PM98_CAMJE/116-183),((NUGC_SYNY3/106-174,((NUGC_MAIZE/87-155,NUGC_MARPO/97-165),NUGC_MESVI/102-170)),(Q9XAQ6_STRCO/167-235,(Q979M2_THEVO/65-133,Q9HRL9_HALN1/101-169))))),((Q9RU88_DEIRA/106-173,NQO5_THETH/90-158),((((HYCE_ECOLI/90-158,HYFG_ECOLI/93-160),Q9UYN4_PYRAB/113-180),Q10884_MYCTU/59-129),((O59105_PYRHO/90-158,Q980H4_SULSO/93-160),((Q9YC25_AERPE/109-179,O28446_ARCFU/283-350),(Q9X0U2_THEMA/84-149,Q9V0S6_PYRAB/85-157)))))))))),(NUGM_DICDI/99-166,(Q9TAI9_CAFRO/109-176,((Q9G8N3_NAEGR/87-154,Q06329_9TRYP/22-86),(Q9XMS3_TETPY/111-183,Q35370_PARTE/94-161))))),(((Q9VZU4_DROME/145-212,Q9G920_OCHDN/85-152),(Q9MGA7_9STRA/80-147,Q9G894_9EUKA/91-158)),(Q35521_PHYME/86-153,Q9G8U3_9CRYP/90-157)),(Q9TCA5_NEPOL/86-153,((Q9MFG7_LUPMU/88-155,NUGM_PROWI/86-153),NUGM_RECAM/94-161)));
((((Q9G4B8_9STRA/85-152:0.17576,NUGM_ACACA/97-162:0.26003):0.15992,((((NUGM_CANMA/150-217:0.13286,Q9UUU0_YARLI/155-222:0.13045):0.07655,NUOC_RICPR/86-153:0.45313):0.09565,(Q9A6X2_CAUCR/88-155:0.13207,(Q98KQ7_RHILO/89-156:0.19583,NUOC1_RHIME/89-156:0.10841):0.03176):0.07799):0.03568,(((Q9PGJ3_XYLFA/134-203:0.25684,NUOC_NEIMB/94-163:0.24494):0.09229,NUOC_RHOCA/89-156:0.30894):0.07584,((NUOC2_RHIME/89-156:0.38351,(O66826_AQUAE/105-172:0.44358,O67335_AQUAE/86-152:0.00000):0.49365):0.11856,(((Q9KGW7_PSEFL/108-174:0.16068,(Q9I0J9_PSEAE/107-174:0.12069,(O85275_PECCC/112-179:0.09963,NUOCD_BUCAI/113-180:0.23611):0.07803):0.05585):0.34280,((O25852_HELPY/121-188:0.34860,Q9PM98_CAMJE/116-183:0.32011):0.30630,((NUGC_SYNY3/106-174:0.08074,((NUGC_MAIZE/87-155:0.14430,NUGC_MARPO/97-165:0.14057):0.10714,NUGC_MESVI/102-170:0.06509):0.12427):0.48110,(Q9XAQ6_STRCO/167-235:0.54026,(Q979M2_THEVO/65-133:0.36340,Q9HRL9_HALN1/101-169:0.53365):0.22829):0.04697):0.00000):0.03384):0.12829,((Q9RU88_DEIRA/106-173:0.35210,NQO5_THETH/90-158:0.10432):0.28406,((((HYCE_ECOLI/90-158:0.16795,HYFG_ECOLI/93-160:0.08241):0.19590,Q9UYN4_PYRAB/113-180:0.44126):0.16728,Q10884_MYCTU/59-129:0.78752):0.45603,((O59105_PYRHO/90-158:0.52083,Q980H4_SULSO/93-160:0.53553):0.29680,((Q9YC25_AERPE/109-179:0.51824,O28446_ARCFU/283-350:0.56469):0.13985,(Q9X0U2_THEMA/84-149:0.51365,Q9V0S6_PYRAB/85-157:0.43272):0.22826):0.39560):0.00000):0.13848):0.03764):0.04817):0.15707):0.06772):0.01375):0.09098,(NUGM_DICDI/99-166:0.51972,(Q9TAI9_CAFRO/109-176:0.25817,((Q9G8N3_NAEGR/87-154:0.00000,Q06329_9TRYP/22-86:1.59195):0.24280,(Q9XMS3_TETPY/111-183:0.57021,Q35370_PARTE/94-161:0.50300):0.46695):0.08903):0.14369):0.11172):0.01393,(((Q9VZU4_DROME/145-212:0.26708,Q9G920_OCHDN/85-152:0.11220):0.03697,(Q9MGA7_9STRA/80-147:0.22513,Q9G894_9EUKA/91-158:0.35438):0.09302):0.06942,(Q35521_PHYME/86-153:0.10799,Q9G8U3_9CRYP/90-157:0.30500):0.07637):0.10405,(Q9TCA5_NEPOL/86-153:0.17812,((Q9MFG7_LUPMU/88-155:0.25710,NUGM_PROWI/86-153:0.18041):0.01879,NUGM_RECAM/94-161:0.20235):0.02732):0.03923);