EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00238 alignment
(18 sequences with 426 bp)


RM38_YEAST/1-138 ATGATATTTCTAAAATCTGTCATCAAGGTAATCGACAATTCAGGTGCACAATTAGCAGAATGTATTAAAGTAATAAGGAAAGGGTCC---------CCCAAGAGTCCTGCAATGGTTGGAGACAGAATAGTCTGTGTTATACAGAAAGCAAAGCCCTTGACTcaaaacattacgGGGACAGCCAACACCAACCGTGTCAAAAAAGGTGATATTTGTCACGCAATTGTCGTAAGGTCTAAACAGCGTAACATGTGCAGAAAGGATGGCTCCACCGTTGCATTCGGAGATACTGCTTGCGTTTTGATTAATaaaAATACCGGTGAACCTCTGGGGACAAGAATTATGGCTaatgatggtTGTGTAGATAGAACACTGAAAGACAAGGGA...TACAATAAGATATGCTCTTTGGCAAGTAGGGTCATA
RM14_ACACA/1-129 ATGATAAACGTACAGACTGTATTAAAAGTAGCTGATAATTCTGGGGCAGTATTTGTTAGTTGTATAAGATTGTTAAATTCCTCC------------TCAAGAGTCGGCGCGGGCGTGGGTGATACAATAACAGTAGTTGTAAAAAAAAGTATTATAAAGAAA............AATATTAAGAAAAGTAAAGAGGTAAAAAAAGGACAAGTCTGTTCTGCGGTAATTCTAAGGACTATA---AAGGGAGTAAAGAGATGGGGAAATTTTTTTTTAAGATCTTCTTCTAATTCAGTAGCATTAATAAAT...AAGTATTGTTTGCCAATTGGGTCTAGATTATTAGGG.........CCTGTTTTTCGCGAAATTAGAGTTAATTTAaaaTTTAGTAAAATAATTTCAATAGCACAAGTTACCCTT
RL14_THETH/1-122 ATGATCCAGCCGCAGACCTACCTCGAGGTGGCCGACAACACCGGGGCCCGGAAGATCATGTGCATCCGGGTGCTCAAGGGCTCC------------AACGCCAAGTACGCCACCGTGGGGGACGTGATCGTGGCCAGCGTCAAGGAGGCCATCCCCCGGGGG............GCGGTCAAGGAAGGGGACGTGGTCAAG------------------GCCGTGGTGGTGCGCACCAAG---AAGGAGGTCAAGCGCCCCGACGGCTCCGCCATCCGCTTTGACGACAACGCCGCCGTGATCATCAAC...AACCAGCTGGAGCCCCGCGGCACCCGCGTCTTCGGC.........CCCGTGGCCCGGGAGCTTCGCGAGAAGGGC...TTCATGAAGATCGTCTCCCTGGCGCCGGAGGTGCTC
RL14_BUCAK/1-123 ATGATCCAAGAACAGACTATGCTGAACGTCGCCGACAACTCCGGTGCACGTCGCGTAATGTGTATCAAGGTTCTAGGTGGCTCG------------CACCGTCGCTACGCAGGCGTCGGCGACATCATCAAAATTACCATCAAGGAAGCAATTCCTCGCGGT............AAGGTGAAGAAAGGCGATGTGCTGAAG------------------GCGGTAGTGGTGCGCACCAAG---AAGGGTGTACGTCGCCCGGACGGTTCTGTCATTCGCTTCGATGGTAATGCATGCGTTATTTTAAATaatAATAGCGAGCAGCCTGTCGGTACGCGTATTTTTGGG.........CCGGTAACTCGTGAACTGCGTAATGAAAGG...TTCATGAAAATTATCTCTCTGGCACCAGAAGTACTC
RL14_THEMA/1-122 ATGATACAGCAAGAGACCTACCTCAATGTGGCAGACAACTCCGGCGCTAAAAAGCTCAGAGTTATAAGAGTTATCGGTGGGTTC------------CATAAAAAGTACGGAACGGTTGGAGATATAGTTGTGTGTTCAGTCAGAGAAGCCATCCCAAATTCT............GATGTGAAAAAAGGAGACGTAGTCAGA------------------GCGGTTATTGTGAGAACAAAG---AAGGAAATCAGAAGGAACGATGGTACTTACATCAGATTCGATGACAACGCGGCTGTTCTCATTGAC...AAGTTCAACGCTCCCAGAGGTACCAGAATCTTTGGA.........CCGGTCGCGAGGGAACTCAGAGAAAAGGGG...TTCATGAAAATAGTATCCCTCGCACCAGAAGTTTGG
RL14_CHLTR/1-122 ATGATCCAGCAAGAAAGTCAGTTAAAAGTTGCCGATAATACGGGGGCTAAGAAAGTTAAGTGTTTCAAGGTTCTAGGCGGATCT------------CGTCGACGTTATGCAACGGTCGGTGATGTGATTGTATGCTCTGTAAGAGATGTTGAGCCTGATAGT............TCCGTAAAGAAGGGGGATGTTGTTAAG------------------GCCGTAATCGTACGGACTCGA---AACGATATCCATCGTAAAGATGGTTCTACACTAAGATTCGATACGAATAGTTGTGTAATCATCGAT...GATAAAGGCAATCCTAAAGGAACTAGAATTTTTGGG.........CCTATAGCAAGGGAGATTCGAGACAGAGGC...TTTGTTAAGATTAGCTCTTTGGCTCCCGAGGTGATT
RK14_MARPO/1-122 ATGATTCAACCTCAAACTTATTTAAATGTTGCAGATAATAGTGGAGCTCGAAAACTAATGTGCATTCGAGTTATAGGAACGAGT------------AATCGAAAATATGCAAATATTGGTGATATTATTATTGCTGTTGTTAAAGAAGCAGTGCCAAATATG............CCTATTAAAAAATCCGAAATTGTAAGA------------------GCTGTAATTGTACGTACGTGT---AAAGAATTTAAACGAAATAATGGATCCATAATAAAATTTGATGATAATGCAGCAGTTGTTATTAAT...CAAGAAGGAAATCCAAAAGGAACTCGAGTTTTTGGT.........CCAATTGCTAGAGAATTAAGAGAATCTAAT...TTTACTAAAATAGTTTCGTTAGCTCCAGAAGTTTTA
RK14_MAIZE/1-123 ATGATTCAACCTCAGACCCTTTTAAATGTAGCAGATAACAGTGGAGCTCGAAAATTGATGTGTATTCGAGTCATAGGAGCCGCTGGT---------AATCAGCGATATGCTCGTATTGGTGATGTTATTATTGCTGTAATCAAAGACGCAGTGCCCCAAATG............CCTCTAGAAAGATCCGAAGTAATTCGA------------------GCTGTAATTGTACGTACACGT---AAAGAATTCAAAGGCGACGACGGTATAATAATACGCTATGATGACAATGCAGCAGTTATCATTGAT...CAAAAAGGAAATCCAAAAGGAACTCGAGTTTTTGGC.........GCGGTTGCCGAAGAATTAAGAGAATTGAAT...TTGACTAAAATAGTTTCATTAGCTCCTGAAGTATTA
RK14_SPIOL/1-121 ATGATTCAACCTCAGACCCATTTGAATGTAGCAGACAACAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGC------------AACCGTCGATATGCTCGTATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATCCCCAACACG............CCCTTAGAAAGATCAGAAGTGATCAGA------------------GCTGTAGTTGTACGTACTTGT---AAAGAACTAAAACGCGACAACGGTATGATAATACGATATGATGACAATGCTGCAGTTATCATTGAT...CAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGT.........GCAATTGCCCGGGAATTGCGACAAAAA---...TTTGCGAAAATAGTTTCATTAGCTCCTGAGGTATTA
RK14_CYAPA/1-122 ATGATTCAACCACAAAGTTATTTAACTGCGGCCGATAATAGTGGAGCTCGTAAATTAATGTGTATTCGAGTTCTTGGGGGAGGA------------AATCGTCGTTATGCTCGAATTGGTGATGTAATTGTCGCTGTAGTAAAAGATGGGATTCCTAATATC............CCAATTAAAAAATCCGATACGGTTAAA------------------GCTGTTATTGTTAGAACTCGA---AAAGAGTTAAAACGTGATAATGGTATGAATATCTGTTTTGATGATAATGCAGCGGTAATTATTAAT...GCGGATGGAAATCCTCGTGGAACACGTGTGTTTGGA.........CCTGTAGCTCGTGAATTACGAGATAAAAAT...TTTACAAAAATTATTTCTTTAGCTCCGGAAGTATTA
RK14_CHLRE/1-122 ATGATTAAACCTTTATCTTATTTAAATGTAGCAGATAATAGTGGTGCTCGTGAATTAATGTGTATTCGTGCTCTTGGTGGCAGT------------TATCGTGAATCGGCAAATATTGGTGATGTTATTATTGCAGTTGTTAAAGATGCATTACCAAATATG............CCTGTAAAACGTTCAGATATTGTACGA------------------GCTGTTATTGTACGTACACGT---AAAGGTATCCGTCGTGAAAATGGTATGGCAATTCGTTTTGATGATAACGCTGCAGTTATTATTAAC...AAAGAAGGAAATCCTCGTGGTACACGTGTTTTTGGT.........CCAATTGCACGTGAATTACGTGATAAAAAT...TTTACAAAAATTGTTTCTTTAGCACCTGAAGTTTTA
RK14_EUGGR/1-121 ATGATTAAACCACAAACATATTTGAAAATTGCGGATAATACTGGAGCACAAAAAATTATGTGTATTCGTATATTAGGACCAAAT---------------TGTCAGTATGCGAATATTGGTGATATAATAATAGCGGTTGTAAAAGAAGCTATTCCTAACATG............GTTGTTAAAAAATCAGATATTGTTAAA------------------GCTGTTATTGTTAGAACTGTT---AAAGGAGTACGTAGAGAAAGTGGAATGGCAATTCGTTTTGACGAAAATGCTGCTGTCATAATTAAT...AATGATCGTTCACCTAAAGGTACAAGAATTTTCGGC.........CCCATTGCTCGCGAATTGCGAGAAAAGGAA...TTCGTAAAAATAATGTCCTTAGCGCCAGAGGTTGTG
RL14_MYCCA/1-122 ATGATTCAAACATTATCTAAATTAAAAGTAGCAGATAACTCAGGTGCTAAAGAAGTTCGTGTTATTCGTAATCTAGGTGGTTCA------------GTTAGAAAATTCTCAGGTATTGGTGATATTATTATTTGCTCAGTAATTTCTGCAACTCCAGGTGCT............GTTATTAAAAAAGGTCAAGTTGTAAAA------------------GCAGTAATTGTTAGAACTACT---CGTGAATTAAGAAGAGAAGATGGAACTTATATTAAATTCTCAGAAAACGCAGCAGTATTAATTAAA...GAAGATAAAACACCACGTGGAACTCGTATTTTTGGT.........CCAATTGCACGTGAAATTAAAGAAGCTGGA...TTTGCAAAAATTGCATCTTTAGCTCCAGAAGTATTA
RL23_RAT/19-140 GGTCTTCCGGTAGGAGCTGTGATCAACTGTGCTGACAACACAGGAGCCAAAAACCTGTATATCATCTCTGTGAAGGGAATCAAGGGACGGCTGAACAGACTTCCTGCTGCTGGTGTGGGCGACATGGTGATGGCCACAGTTAAGAAAGGCAAACCAGAA---............------CTAAGGAAAAAGGTACATCCT------------------GCAGTGGTGATTCGACAACGA---AAGTCATATCGAAGAAAAGACGGGGTGTTCCTTTATTTTGAAGATAATGCAGGGGTCATAGTAAAC...AATAAAGGCGAGATGAAAGGTTCTGCTATCACAGGT.........CCAGTTGCAAAGGAGTGTGCAGACTTG---...TGGCCCAGGATTGCATCCAATGCAGGAAGCATTGCC
RL14_METVA/11-132 TCATTACCAAACGGAGCAAGACTCGTCTGTGCAGACAACACAGGTGCAAAAGAGCTTGAAGTAATTGCAGTTAAAAACTACTCAGGTACGGTAAGGAGATTGCCTTCTGCAGGAGTAGGCCAAATTGTTTTCGTTTCAGTTAAAAAAGGTACTCCTGAA---............------ATGAGAAAACAGGTATTGCCT------------------GCAATTATTATCCGACAGAAA---AAGGAATACAAAAGAGCTGACGGTACAAGAGTTAAATTCGAAGATAACGCAGCTGTTATTGTAACT...CCAGAAGGAACGCCAAAAGGTTCAGACATCAAAGGC.........CCTGTTTCAAAAGAAGCTGCTGAAAGA---...TGGCCAGGTGTTTCAAGATTAGCTAAAATTATTCAC
RL14_HALMA/11-132 GGCCTAGAGAAGGGCTCGCTCATCACGTGTGCGGACAACACGGGAGCGCGCGAACTCAAGGTCATTTCCGTCCACGGCTACTCGGGAACGAAGAACCGCCACCCCAAAGCTGGGCTGGGCGACAAGATCACGGTCTCGGTCACCAAGGGGACGCCCGAA---............------ATGCGTCGTCAGGTGCTCGAA------------------GCCGTCGTCGTCCGCCAGCGA---AAGCCGATCCGTCGACCCGACGGCACCCGCGTCAAGTTCGAAGACAACGCGGCCGTCATCGTCGAC...GAAAACGAGGACCCGCGCGGGACCGAGCTGAAAGGT.........CCAATCGCACGGGAAGTCGCACAGCGA---...TTCGGCAGTGTGGCATCAGCAGCGACGATGATTGTA
RM14_TETPY/1-119 ATGATACAAAAAGAAACTAATTTAAAACCAATAGATAAATGCGGAGTTTGATCAGTAAGGGCGTTTCATTTATATGGTGGTTCG------------TTTAGAAATCAATCTACAATAAGTAACTTTTTAAAAGTTAGTGTAAAAAAAACAAGAGCAAATAAT............TGAGTACCGAAAAAAACAAAATTAAAA------------------GCAATAATTGTTACACTAAAA---AAAGAATTAAAAAAAATAGATGGTAGCTATATAAAATTTAGAACAAATAATGTTGTCCTATTAAAA...AAAAGATTAACCCCTAAAGGAAAAATATTAATGGGG.........CCCGTTAGTTCAAATTTAAGGAGAAAACGT...------TTCTTAACTTCTTTTTGTGGATCTATT---
RM14_PARTE/1-119 ATGATCCAGAAAGAAACACAGCTCAATGTTTGTGATACCAGCTCTGTTTGGGTGGTCAACACCTTTCATATTTATAGGGGATTT------------AGGCATCGTATAGGACGCCTAGGGGACTATATCAAGGTCTCCATACGTAGTACAAAGCCAGAGTGC............ACGATTAAGCGTGGTAAAAAAAAAAAA------------------GCTATAATAGTTCGACACGCCTTTGGAAGATTGAAGAGG---GACGGCTCTTTTTCTAAGTTTAGTAGCAACGTTTGCGTTTTATTAAAG...AAAAGAACTGCTCCCCTAGGGCGAGAGATCAAAGGC.........CCTATCTTTTATGGTGTAAAAAAAAAAAAA...------TTTGTTGCTTCCTTTCCCGGACGGGTG---