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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00190 phylogeny
for restricted amino acid alignment


 
((((((((((((((((((((Q40346_MAGSL/297-446,(Q9M4R4_ELAGV/299-448,((GLU2_ORYSA/319-468,(GLU4_ORYSA/315-464,O49257_AVESA/283-432)),Q9ZWJ8_ORYSA/331-480))),((((O82437_COFAR/317-466,(Q43607_PRUDU/380-529,Q43608_PRUDU/327-476)),LEGA_GOSHI/337-486),(((((LEGA2_PEA/348-497,Q9SMJ4_CICAR/324-470),(GLC1_SOYBN/323-472,O82580_ARAHY/335-484)),Q9M4Q8_RICCO/302-451),Q41128_QUERO/311-461),(((GLC4_SOYBN/390-536,LEGB2_VICFA/167-314),Q9FEC5_SOYBN/360-509),13S1_FAGES/390-539))),11SB_CUCMA/309-458)),((11S3_HELAN/318-467,Q38712_AMAHP/325-474),(((12S1_ARATH/295-444,12S2_ARATH/282-431),CRU1_RAPSA/302-451),Q9ZWA9_ARATH/283-432))),((LEGB_GOSHI/346-496,Q39627_CITSI/312-461),(Q9AUD2_SESIN/302-452,Q9M4Q7_RICCO/185-334))),(P93559_SAGSA/405-554,P93560_SAGSA/619-768)),((Q39694_9LILI/306-456,(Q9SE84_PERFR/298-447,Q9XHP0_SESIN/290-439)),(Q38698_ASAEU/291-440,(Q38697_ASAEU/288-437,Q40348_MAGSL/303-452)))),Q9ZRH9_ORYSA/340-487),(((O04689_METGY/327-475,(Q40837_PICGL/14-163,Q41017_PINST/300-446)),Q39770_GINBI/286-434),(Q39722_9SPER/332-481,(Q39775_GNEGN/381-531,Q41714_WELMI/334-484)))),Q9LQQ3_ARATH/190-339),((Q9FYW3_LYCES/67-219,(O23211_ARATH/242-398,Q9ZU69_ARATH/239-395)),((Q9AVK8_SOYBN/276-426,(Q9SK09_ARATH/329-480,(Q39651_9ROSI/294-443,Q42390_DAUCA/279-428))),Q40371_MATST/330-479))),(((((((Q40371_MATST/121-253,((Q39651_9ROSI/56-186,Q9AVK8_SOYBN/37-167),(Q42390_DAUCA/35-165,Q9SK09_ARATH/86-216))),(Q41727_ZAMFU/38-168,(Q40844_PICGL/62-190,((((((O49927_PEA/98-228,Q9SP11_SOYBN/107-234),((AL11_ARAHY/176-303,(((CANA_CANEN/56-183,PHS1_PHALU/46-172),(GLCA_SOYBN/203-330,GLCB_SOYBN/42-169)),(CVCA_PEA/162-289,Q41677_VICNA/43-170))),Q9LUJ7_ARATH/71-199)),((Q9SEW4_9ROSI/187-316,Q9ZWI3_CUCMA/398-528),(VCLA_GOSHI/190-317,(Q9SQ24_9ROSI/1-121,Q9SQ30_9ROSI/1-121)))),Q9SPL3_MACIN/218-345),(Q9AU64_ELAGV/153-281,Q9AUD0_SESIN/203-330)),(Q03678_HORVU/185-317,(GLB1_MAIZE/111-238,Q9ZRG9_ORYSA/1-128)))))),(O06336_MYCTU/52-167,O26452_METTH/1-131)),((Q9UYJ9_PYRAB/7-111,Q9FCA5_STRCO/9-156),Q9UX38_SULSO/59-177)),((((((O81385_ORYSA/65-213,(GER2_WHEAT/63-214,(GLT1_ARATH/64-212,GLT3_ARATH/71-219))),((((GL18_ARATH/65-216,((GL19_ARATH/66-213,GL110_ARATH/67-215),GL112_ARATH/65-216)),(GL114_ARATH/62-214,(GL17_ARATH/64-215,(GL16_ARATH/65-216,((GL12_ARATH/64-215,GL13_ARATH/64-212),GL14_ARATH/64-215))))),(Q9SC38_PEA/33-184,(O48999_ORYSA/24-175,(O48997_ORYSA/63-213,Q9FYY2_HORVU/62-213)))),(GLP1_MESCR/63-211,Q9ST00_ATRLE/63-216))),GL32_ARATH/68-213),((GL11_ARATH/59-209,O49135_9CONI/62-211),(GL34_ARATH/58-190,(Q9ATZ1_LINUS/54-202,(Q9FPP9_BETVU/54-199,(((Q9SEL3_GOSHI/49-196,(ABP20_PRUPE/58-204,GL33_ARATH/55-201)),(O49001_ORYSA/56-203,Q9M3Y4_PHAVU/51-196)),(GLP1_IPONI/58-204,GL31_ARATH/52-198))))))),(Q9SSX3_9BRYO/30-176,(O49000_ORYSA/61-209,(((GL22_ARATH/59-209,GL24_ARATH/60-209),(GL21_ARATH/61-204,((NEC1_NICPL/69-217,(O64439_LYCES/64-214,O65358_SOLTU/62-209)),RHRE_PEA/58-207))),((GL23_ARATH/60-209,GL25_ARATH/58-203),Q9XHW8_ORYSA/67-216))))),SR1A_PHYPO/74-220)),(P73510_SYNY3/237-379,(OXDC_BACSU/228-369,((P73510_SYNY3/55-200,((OXDC_BACSU/50-192,Q9UVK4_FLAVE/111-254),OXDD_BACSU/61-200)),(OXDD_BACSU/236-377,Q9UVK4_FLAVE/292-431))))),((Q9LQQ3_ARATH/5-157,Q9M674_CUCME/5-139),((Q39770_GINBI/47-200,((((O04691_METGY/45-229,O04689_METGY/48-233),Q39484_CALDE/41-230),((Q40870_PICGL/49-217,Q41017_PINST/26-193),Q40933_PSEMZ/54-221)),(Q39722_9SPER/48-234,(Q39775_GNEGN/45-255,Q41714_WELMI/49-216)))),((11S3_HELAN/37-192,(((((LEGA_GOSHI/39-192,Q9M4Q8_RICCO/38-189),Q41128_QUERO/42-195),((((GLC4_SOYBN/37-195,LEGB4_VICFA/38-193),Q9FEC5_SOYBN/36-183),((O82580_ARAHY/14-181,LEGA2_PEA/37-190),GLC1_SOYBN/36-190)),(Q43607_PRUDU/37-250,Q43608_PRUDU/28-203))),((Q39694_9LILI/45-203,((Q38697_ASAEU/44-202,(Q38698_ASAEU/40-201,Q40348_MAGSL/47-207)),(Q9SE84_PERFR/45-206,Q9XHP0_SESIN/39-201))),((((((GLU2_ORYSA/51-212,(GLU4_ORYSA/50-207,(O49257_AVESA/50-207,Q08837_WHEAT/50-211))),Q9ZWJ8_ORYSA/53-217),Q9SNZ2_ELAGV/50-209),Q9M4R4_ELAGV/51-210),Q40346_MAGSL/46-204),((((O82437_COFAR/41-216,Q9AUD2_SESIN/54-207),11SB_CUCMA/53-206),(LEGB_GOSHI/55-207,Q39627_CITSI/53-206)),(13S1_FAGES/49-275,(P93559_SAGSA/56-227,P93560_SAGSA/41-217)))))),Q38712_AMAHP/55-225)),((CRU1_RAPSA/42-206,(12S2_ARATH/35-192,(12S1_ARATH/41-199,CRUA_BRANA/35-225))),Q9ZWA9_ARATH/41-199)))))),Q41726_ZAMFU/143-282),Q40844_PICGL/256-422),Q03678_HORVU/389-562),((((VCLA_GOSHI/387-543,VCLB_GOSHI/386-545),VCL_THECC/350-513),(Q9LUJ7_ARATH/278-427,((Q9SEW4_9ROSI/386-556,Q9ZWI3_CUCMA/593-772),(((CANA_CANEN/249-407,((GLCA_SOYBN/406-545,Q39816_SOYBN/101-240),(PHS1_PHALU/231-357,PHSA_PHAVU/243-369))),((CVCA_PEA/370-511,Q41674_VICNA/345-507),AL11_ARAHY/390-544)),(Q41677_VICNA/254-404,Q43626_PEA/250-396))))),Q9SPL3_MACIN/414-562)),Q9AUD0_SESIN/395-539),Q9AU64_ELAGV/345-531),((Q9ZRH0_ORYSA/2-186,Q9ZRH1_ORYSA/2-157),((Q9ZRG9_ORYSA/199-391,Q03866_MAIZE/111-458),GLB1_MAIZE/311-491))),Q9SP11_SOYBN/299-442),O49927_PEA/291-456,Q9AVP7_VICFA/291-456);
((((((((((((((((((((Q40346_MAGSL/297-446:0.20757,(Q9M4R4_ELAGV/299-448:0.23389,((GLU2_ORYSA/319-468:0.08334,(GLU4_ORYSA/315-464:0.17701,O49257_AVESA/283-432:0.10794):0.04241):0.15873,Q9ZWJ8_ORYSA/331-480:0.32702):0.11322):0.07659):0.08559,((((O82437_COFAR/317-466:0.26679,(Q43607_PRUDU/380-529:0.12593,Q43608_PRUDU/327-476:0.27247):0.11488):0.01431,LEGA_GOSHI/337-486:0.39787):0.06422,(((((LEGA2_PEA/348-497:0.07030,Q9SMJ4_CICAR/324-470:0.31414):0.09779,(GLC1_SOYBN/323-472:0.20238,O82580_ARAHY/335-484:0.30768):0.06940):0.31929,Q9M4Q8_RICCO/302-451:0.25382):0.08207,Q41128_QUERO/311-461:0.18611):0.11153,(((GLC4_SOYBN/390-536:0.19822,LEGB2_VICFA/167-314:0.20834):0.11802,Q9FEC5_SOYBN/360-509:0.32807):0.15554,13S1_FAGES/390-539:0.31408):0.08912):0.02868):0.04089,11SB_CUCMA/309-458:0.36814):0.02889):0.03573,((11S3_HELAN/318-467:0.42146,Q38712_AMAHP/325-474:0.24275):0.07028,(((12S1_ARATH/295-444:0.09513,12S2_ARATH/282-431:0.15367):0.17258,CRU1_RAPSA/302-451:0.22145):0.10428,Q9ZWA9_ARATH/283-432:0.37550):0.10941):0.07166):0.02132,((LEGB_GOSHI/346-496:0.31656,Q39627_CITSI/312-461:0.18186):0.05948,(Q9AUD2_SESIN/302-452:0.27939,Q9M4Q7_RICCO/185-334:0.21535):0.07184):0.06634):0.07165,(P93559_SAGSA/405-554:0.17958,P93560_SAGSA/619-768:0.31436):0.24103):0.12245,((Q39694_9LILI/306-456:0.33918,(Q9SE84_PERFR/298-447:0.15636,Q9XHP0_SESIN/290-439:0.17147):0.19248):0.09009,(Q38698_ASAEU/291-440:0.16548,(Q38697_ASAEU/288-437:0.19778,Q40348_MAGSL/303-452:0.12588):0.06989):0.07756):0.17753):0.09797,Q9ZRH9_ORYSA/340-487:1.19858):0.00367,(((O04689_METGY/327-475:0.20477,(Q40837_PICGL/14-163:0.08688,Q41017_PINST/300-446:0.18660):0.21164):0.02725,Q39770_GINBI/286-434:0.16528):0.10226,(Q39722_9SPER/332-481:0.62665,(Q39775_GNEGN/381-531:0.34569,Q41714_WELMI/334-484:0.27780):0.11154):0.23595):0.10359):0.49442,Q9LQQ3_ARATH/190-339:0.99420):0.25642,((Q9FYW3_LYCES/67-219:0.31279,(O23211_ARATH/242-398:0.29979,Q9ZU69_ARATH/239-395:0.23272):0.07192):0.18878,((Q9AVK8_SOYBN/276-426:0.33824,(Q9SK09_ARATH/329-480:0.23199,(Q39651_9ROSI/294-443:0.16540,Q42390_DAUCA/279-428:0.47440):0.07161):0.08955):0.24350,Q40371_MATST/330-479:0.35487):0.13180):0.27170):0.30956,(((((((Q40371_MATST/121-253:0.68609,((Q39651_9ROSI/56-186:0.20628,Q9AVK8_SOYBN/37-167:0.19399):0.04950,(Q42390_DAUCA/35-165:0.46438,Q9SK09_ARATH/86-216:0.27689):0.05799):0.42514):0.04193,(Q41727_ZAMFU/38-168:0.45463,(Q40844_PICGL/62-190:0.33925,((((((O49927_PEA/98-228:0.38280,Q9SP11_SOYBN/107-234:0.27617):0.24772,((AL11_ARAHY/176-303:0.36212,(((CANA_CANEN/56-183:0.38474,PHS1_PHALU/46-172:0.34814):0.03557,(GLCA_SOYBN/203-330:0.18005,GLCB_SOYBN/42-169:0.15360):0.10038):0.11487,(CVCA_PEA/162-289:0.19098,Q41677_VICNA/43-170:0.17217):0.22784):0.18563):0.22602,Q9LUJ7_ARATH/71-199:0.69589):0.11559):0.07004,((Q9SEW4_9ROSI/187-316:0.40470,Q9ZWI3_CUCMA/398-528:0.36452):0.09656,(VCLA_GOSHI/190-317:0.16935,(Q9SQ24_9ROSI/1-121:0.20101,Q9SQ30_9ROSI/1-121:0.22227):0.07369):0.26058):0.06947):0.00594,Q9SPL3_MACIN/218-345:0.39122):0.06842,(Q9AU64_ELAGV/153-281:0.40646,Q9AUD0_SESIN/203-330:0.28029):0.05025):0.18363,(Q03678_HORVU/185-317:0.50246,(GLB1_MAIZE/111-238:0.08121,Q9ZRG9_ORYSA/1-128:0.24172):0.05732):0.49193):0.31226):0.16463):0.60137):0.44298,(O06336_MYCTU/52-167:1.11465,O26452_METTH/1-131:0.93804):0.43676):0.30931,((Q9UYJ9_PYRAB/7-111:1.09921,Q9FCA5_STRCO/9-156:1.45717):0.32694,Q9UX38_SULSO/59-177:1.02512):0.17429):0.17435,((((((O81385_ORYSA/65-213:0.43853,(GER2_WHEAT/63-214:0.37541,(GLT1_ARATH/64-212:0.12514,GLT3_ARATH/71-219:0.46566):0.17029):0.09140):0.18727,((((GL18_ARATH/65-216:0.16282,((GL19_ARATH/66-213:0.17261,GL110_ARATH/67-215:0.13579):0.10513,GL112_ARATH/65-216:0.15225):0.05882):0.04195,(GL114_ARATH/62-214:0.12303,(GL17_ARATH/64-215:0.02531,(GL16_ARATH/65-216:0.16507,((GL12_ARATH/64-215:0.13351,GL13_ARATH/64-212:0.10311):0.13110,GL14_ARATH/64-215:0.24982):0.19595):0.06082):0.11211):0.08416):0.09243,(Q9SC38_PEA/33-184:0.21565,(O48999_ORYSA/24-175:0.07523,(O48997_ORYSA/63-213:0.08780,Q9FYY2_HORVU/62-213:0.18837):0.14233):0.08146):0.07326):0.03372,(GLP1_MESCR/63-211:0.29367,Q9ST00_ATRLE/63-216:0.27437):0.08937):0.17526):0.02994,GL32_ARATH/68-213:0.69881):0.04274,((GL11_ARATH/59-209:0.50748,O49135_9CONI/62-211:0.29187):0.24782,(GL34_ARATH/58-190:0.56121,(Q9ATZ1_LINUS/54-202:0.62370,(Q9FPP9_BETVU/54-199:0.59644,(((Q9SEL3_GOSHI/49-196:0.25214,(ABP20_PRUPE/58-204:0.14484,GL33_ARATH/55-201:0.21473):0.06181):0.03729,(O49001_ORYSA/56-203:0.23603,Q9M3Y4_PHAVU/51-196:0.37199):0.07618):0.02810,(GLP1_IPONI/58-204:0.38125,GL31_ARATH/52-198:0.18879):0.05593):0.11775):0.06175):0.21844):0.12298):0.08630):0.02955,(Q9SSX3_9BRYO/30-176:0.38889,(O49000_ORYSA/61-209:0.18953,(((GL22_ARATH/59-209:0.19848,GL24_ARATH/60-209:0.11191):0.04816,(GL21_ARATH/61-204:0.30628,((NEC1_NICPL/69-217:0.20137,(O64439_LYCES/64-214:0.13213,O65358_SOLTU/62-209:0.11841):0.06494):0.05381,RHRE_PEA/58-207:0.21891):0.03174):0.03988):0.05849,((GL23_ARATH/60-209:0.26303,GL25_ARATH/58-203:0.21536):0.21455,Q9XHW8_ORYSA/67-216:0.16406):0.03489):0.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