EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00054 alignment
(16 sequences with 519 bp)


PRTS_HUMAN/329-459 TTCCGGACATATGATTCAGAAGGCGTGATACTG------TACGCA...GAATCTATCGATCACTCA---------------------...---GCGTGGCTCCTGATTGCACTTCGTGGTGGAAAGATTGAAGTTCAGCTTAAGAATGAACATACA------------TCCAAAATCACAACTGGAGGTGATGTT---ATTAATAATGGTCTATGGAATATGGTGTCTGTGGAAGAATTAGAACATAGTATTAGCATTAAAATAGCT...AAAGAAGCT---....................................GTGATGGATATAAATAAACCT---GGACCCCTTTTTAAGCCGGAA...AATGGATTGCTGGAAACCAAA---...---GTATACTTTGCAGGATTCCCTCGG---......---AAAGTGGAAAGTGAACTCATTAAACCGATTAACCCTCGTCTAGATGGATGTATACGA------AGCTGGAATTTGATGAAGCAAGGA
SHBG_HUMAN/75-205 GTTCGAACCTGGGACCCAGAGGGAGTGATTTTT------TATGGG...GATACCAACCCTAAGGAT---------------------...---GACTGGTTTATGCTGGGACTTCGAGACGGCAGGCCTGAGATCCAACTGCACAATCACTGGGCC------------CAGCTTACGGTGGGTGCTGGACCACGG---CTGGATGATGGGAGATGGCACCAGGTGGAAGTCAAGATGGAGGGGGACTCTGTGCTGCTGGAGGTGGAT...GGGGAGGAG---....................................GTGCTGCGCCTGAGACAGGTCTCTGGGCCCCTGACCAGCAAACGC...CATCCCATCATGAGGATTGCG---...---CTTGGGGGGCTGCTCTTCCCC------......---------GCTTCCAACCTTCGGTTGCCGCTGGTTCCTGCCCTGGATGGCTGCCTGCGCCGGGATTCCTGGCTGGACAAACAGGCCGAG
SHBG_RAT/76-206 TTTCGAACCTGGGATCCAGAGGGAGTGATTTTT------TATGGG...GACACCAACACTGAAGAT---------------------...---GACTGGTTCATGCTGGGACTGCGGGATGGCCAGCTTGAAATCCAGCTGCACAATCTCTGGGCT------------CGGCTTACAGTAGGCTTTGGCCCTCGG---CTGAATGATGGGAGATGGCACCCGGTGGAGCTAAAGATGAACGGGGATTCACTGCTGCTATGGGTGGAT...GGAAAAGAG---....................................ATGCTATGCCTGAGACAAGTTTCTGCATCCCTGGCTGACCATCCC...CAGCTCAGCATGAGGATTGCA---...---CTAGGGGGGCTCCTCCTCCCC------......---------ACTTCCAAACTTCGGTTTCCGCTCGTTCCTGCCCTGGATGGCTGTATACGCCGAGATATCTGGCTGGGCCACCAGGCCCAG
PGG2_RAT/55-182 TTCTCCACATCGCAGCCCGAAGCCCTGCTCCTC------TTGGCA...GCAGGCCAAACAGATCAT---------------------...---------CTCCTGCTGCAGCTCCAGTCTGGACACCTACAGGTCAGACTTGCCCTGGGACAAAAT---------GAGCTGAGTCTGCAGACACCAGCAGACACGGTGCTGAGTGACTCCACAACCCACACCGTAGTGCTCACCGTCTCCAACAGCTGGGCTGTGCTGTCTGTTGAT...GGAGTGTTGAAC....................................---------ACCTCTGCCCCCATCCCAAAAGCATCC---------...CACCTCAAAGTCCCCTATGGG---...---CTCTTTGTGGGCTCCTCTGGA------......---AGCCTTGACCTGCCTTACCTGAAGGGAATCAGTCGACCCCTGAGGGGCTGCCTCCACTCAGCCATTCTCAATGGCCGCAACCTTCTC
FAT_DROME/4156-4306 TTCGCCACGACGAAACCCAACTCCTTGTTGCTG------TACAACtacGGAATGCAGAGTGGCGGCAGATCC---------------...---GATTTCCTGGCCATCGAACTGGTGCACGGCAGGGCGTATTTCTCATCTGGAGGAGCTCGTACT------------GCTATCAGTACTGTGATTGCTGGACGAAATCTGGCTGACGGTGGATGGCACAAGGTTACGGCCACCCGGAATGGACGTGTGATGTCACTCAGCGTGGCC...AAGTGCGCAGATtccggtgacgtttgtacggaatgcctgcccggagatTCTAGCTGCTATGCGGACGAAGTGGGACCAGTGGGA---------...ACTCTCAACTTCAACAAACAGCCC...---CTGATGATCGGTGGCTTGTCCTCGGCT......GATCCTATCTTGGAGCGACCTGGTCAAGTGCACAGTGATGATCTGGTGGGCTGTCTGCACAGTGTTCATATCGGAGGACGTGCCCTGAAC
LAMA2_HUMAN/2368-2507 TTCAGAACATTTTCTTCGAGTGCTCTTCTGATG------TATCTT...GCCACACGAGACCTGAGA---------------------...---GATTTCATGAGTGTGGAGCTCACTGATGGGCACATAAAAGTCAGTTACGATCTGGGCTCAGGA------------ATGGCTTCCGTTGTCAGCAATCAAAAC---CATAATGATGGGAAATGGAAATCATTCACTCTGTCAAGAATTCAAAAACAAGCCAATATATCAATTGTA...GATATAGATACTaat..............................cagGAGGAGAATATAGCAACTTCGTCTTCTGGAAACAACTTTGGTCTT...GACTTGAAAGCAGATGACAAA---...---ATATATTTTGGTGGCCTGCCAACGCTG...agaAACTTGAGTATGAAAGCAAGGCCAGAAGTAAATCTGAAGAAATATTCCGGCTGCCTCAAAGATATTGAAATTTCAAGAACTCCGTACAAT
SLIT_DROME/1204-1335 TTCAGTAGCGCGGAGCAGAATGGAATTCTCATG------TACGAC...GGCCAGGATGCTCATCTT---------------------...------------GCAGTGGAACTGTTTAATGGGCGTATTCGGGTTAGCTACGATGTGGGTAATCAC------------CCTGTGTCCACGATGTACAGCTTTGAGATGGTGGCCGATGGAAAGTACCATGCCGTGGAGCTTCTGGCCATCAAGAAGAATTTCACGCTGCGCGTGGATcgcGGATTGGCCCGT....................................------TCCATCATCAACGAGGGCTCCAACGACTAC---------...---CTGAAACTCACGACGCCC---...---ATGTTCCTGGGCGGCCTACCAGTGGATcctgcaCAGCAGGCGTACAAGAACTGGCAAATACGCAACCTTACCAGCTTTAAGGGCTGCATGAAGGAGGTGTGGATCAATCATAAGCTGGTCGAC
LAMA2_HUMAN/2793-2921 GTAAGAACCGAAGCTGAATCCGGCTTGCTTTTT------TACATG...GCTGCGATCAATCATGCT---------------------...---GATTTTGCAACAGTTCAGCTGAGAAATGGATTGCCCTACTTCAGCTATGACTTGGGGAGTGGG------------GACACCCACACCATGATCCCCACCAAA---ATCAATGATGGCCAGTGGCACAAGATTAAGATAATGAGAAGTAAGCAAGAAGGAATTCTTTATGTAGAT...GGGGCTTCCAAC....................................------AGAACCATCAGTCCCAAAAAAGCCGACATC---------...---CTGGATGTCGTGGGAATG---...---CTGTATGTTGGTGGGTTACCC------......ATCAACTACACTACCCGAAGAATTGGTCCAGTGACCTATAGCATTGATGGCTGCGTCAGGAATCTCCACATGGCAGAGGCCCCTGCCGAT
AGRN_RAT/1811-1942 TTACGCACTGAGGCCACTCAGGGGCTGGTGCTG------TGGATT...GGCAAGGCTGCAGAACGTGCA------------------...---GATTACATGGCCCTGGCCATCGTGGACGGGCACCTGCAACTGAGCTATGACCTAGGTTCCCAG------------CCAGTTGTGCTGCGCTCCACTGTGAAG---GTCAACACCAACCGCTGGCTTCGAATCAGGGCTCACAGGGAGCACAGGGAAGGTTCCCTTCAGGTGGGC...AATGAAGCCCCT....................................---GTGACTGGATCTTCCCCATTGGGTGCCACGCAA---------...---CTGGACACAGATGGAGCC---...---CTGTGGCTTGGAGGCCTGCAGAAGCTT......CCTGTGGGGCAGGCTCTACCCAAG---GCCTATGGCACAGGTTTTGTGGGCTGTCTGCGGGACGTGGTAGTGGGCCATCGCCAGTTGCAT
AGRN_CHICK/1807-1938 ATCAAAACAGAAGCAACCCAGGGCCTGATCTTG------TGGAGT...GGGAAGGGGCTGGAGCGATCC------------------...---GACTACATCGCCCTCGCCATCGTGGATGGCTTCGTGCAGATGATGTATGACCTGGGCTCCAAG------------CCAGTCGTCCTGCGGTCCACAGTCCCC---ATCAACACCAACCACTGGACCCACATCAAAGCATACAGAGTACAGAGAGAAGGCTCCCTCCAGGTCGGC...AACGAAGCTCCC....................................---ATCACTGGCTCTTCACCGCTGGGTGCCACACAG---------...---CTGGACACGGATGGGGCC---...---CTGTGGCTGGGGGGAATGGAGCGGCTC......AGCGTGGCTCACAAGCTGCCCAAG---GCTTACAGCACTGGCTTTATTGGCTGTATAAGGGACGTGATTGTCGACCGCCAAGAACTGCAT
AGRN_RAT/1559-1694 TTCTTGGCTCGTGGGCCCAGTGGCTTACTCCTC------TACAAT...GGGCAGAAGACAGATGGCAAGGGG---------------...---GACTTTGTATCCCTGGCCCTGCATAACCGGCACCTAGAGTTCTGCTATGACCTTGGCAAGGGG------------GCTGCAGTCATCAGGAGCAAAGAGCCC---ATAGCCCTGGGAACCTGGGTCAGGGTATTCCTGGAACGAAATGGCCGCAAGGGTGCCCTTCAAGTGGGT...GATGGTCCCCGT....................................---GTGCTAGGGGAATCTCCGAAATCCCGCAAGGTTCCGCACACC...ATGCTCAACCTCAAGGAGCCT---...---CTCTATATTGGGGGAGCTCCT------......GACTTCAGCAAGCTGGCCAGGGGGGCTGCAGTGTCCTCTGGCTTCAGTGGTGTCATCCAGCTGGTGTCTCTAAGAGGCCATCAACTGCTG
AGRN_CHICK/1564-1699 TTCCTGGCCAAGAGTCCCAGTGGCATGATCTTC------TACAAT...GGGCAGAAGACAGATGGCAAAGGA---------------...---GACTTTGTGTCTCTGGCTTTGCACGATGGCTACCTGGAGTATCGATATGACCTGGGAAAGGGG------------GCAGCTGTGCTCAGGAGCAAAGAGCCA---GTTCCCCTCAACACCTGGATAAGCGTTTTGTTGGAGAGGAGTGGGCGCAAAGGGGTAATGAGGATCAAC...AATGGCGAGAGG....................................---GTGATGGGAGAGTCACCGAAATCCCGTAAGGTGCCTCACGCC...TTCCTCAACCTGAAGGAGCCA---...---TTCTACGTGGGGGGAGCCCCC------......GATTTCAGCAAGCTGGCTCGAGCTGCAGCCATCTCCACCAGCTTCTATGGAGCTGTGCAGAGGATCTCCATCAAAGGGGTTCCCTTGCTG
AGRN_RAT/1291-1422 TTCCGGGCTTTGGAGACAGAGGGACTGCTACTC------TACAAT...GGCAATGCACGTGGCAAA---------------------...---GATTTCCTGGCTCTGGCTCTGTTGGATGGGCGTGTGCAGTTCAGGTTTGACACAGGCTCAGGG------------CCAGCAGTGCTAACGAGCTTAGTGCCA---GTGGAACCAGGACGGTGGCACCGCCTCGAGTTGTCACGGCATTGGCGTCAGGGCACACTTTCTGTGGAT...GGCGAGACTCCT....................................---GTTGTAGGTGAAAGTCCCAGTGGCACCGATGGC---------...---CTCAACTTGGACACGAAC---...---CTCTATGTGGGTGGTATCCCAGAAGAA......CAAGTTGCCATGGTGCTTGATCGGACCTCTGTGGGCGTTGGCCTGAAAGGATGCATTCGTATGCTGGATATCAACAATCAGCAGCTGGAG
AGRN_CHICK/1298-1428 TTCAGGGCCACGGAGCTCAGCGGGCTGCTGCTC------TACAAC...GGGCAGAATCGTGGCAAG---------------------...---GACTTCATCTCCCTGGCACTGGTGGGCGGCTTCGTGGAGCTCAGGTTTAACACAGGCTCTGGC------------ACGGGCGTCATCACCAGCAAGGTGCGC---GTGGAGCCTGGCAAGTGGCACCAGCTGGTGGTGAACCGCAACCGCCGCAGCGGCATGCTGGCTGTGGAT...GGGGAGCAC---....................................---GTCAGTGGGGAGAGCCCCACGGGTACCGATGGG---------...---CTCAACCTCGACACCGAC---...---CTCTTTGTTGGAGGAGCTCCTGAAGAC......CAAATGGCTGTAGTGGCAGAGCGTACTGCGGCTACGGTTGGCCTGAAGGGCTCGATCCGCCTCCTGGATGTGAACAACCAGATGTACGAC
LAMA2_HUMAN/2174-2314 GTAAAGACAGCTGTTGCTGATAACCTCCTCTTT------TATCTT...GGAAGTGCCAAATTTATT---------------------...---GACTTTCTGGCTATAGAAATGCGTAAAGGCAAAGTCAGCTTCCTCTGGGATGTTGGATCTGGA------------GTTGGACGTGTAGAGTACCCAGATTTGACTATTGATGACTCATATTGGTACCGTATCGTAGCATCAAGAACTGGGAGAAATGGAACTATTTCTGTGAGA...GCCCTGGATGGAcccaaagccagc............attgtgcccagcACACACCATTCGACGTCTCCTCCAGGGTACACGATTCTAGAT---...---GTGGATGCAAATGCAATG---...---CTGTTTGTTGGTGGCCTGACT------......---GGGAAATTAAAGAAGGCTGATGCTGTACGTGTGATTACATTCACTGGCTGCATGGGAGAAACATACTTTGACAACAAACCTATAGGT
LAMA2_HUMAN/2554-2695 TTCAGCACCAAGAATGAGTCCGGCATCATTCTTTTGGGAAGTGGA...GGGACACCAGCACCACCTAGGAGAAAACGAAGGCAGACTggaCAGGCCTATTATGTAATACTCCTCAACAGGGGCCGTCTGGAAGTGCATCTCTCCACAGGGGCACGA---ACAATGAGGAAAATTGTCATCAGACCAGAGCCGAATCTGTTTCATGATGGAAGAGAACATTCCGTTCATGTAGAGCGAACTAGAGGCATCTTTACAGTTCAAGTGGAT...GAAAACAGAAGA....................................---------TACATGCAAAACCTGACAGTTGAACAGCCT------...------ATCGAAGTTAAAAAG---...---CTTTTCGTTGGGGGTGCTCCA------......---CCTGAATTTCAACCTTCCCCACTCAGAAATATTCCTCCTTTTGAAGGCTGCATATGGAATCTTGTTATTAACTCTGTCCCCATGGAC