EMBL-EBI > Goldman Group

PANDIT Home | Browse PANDIT | Help on PANDIT | Release notes | Pfam



PANDIT Homepage
pan•dit
PANDIT
Protein and Associated NucleotideDomains with Inferred Trees
(View raw data for PF00023 - Ank)
Ankyrin repeat
(Pfam reference: accession no. PF00023)
(Interpro reference: accession no. IPR002110)


sequences alignment phylogeny
amino acids
(Pfam-A seed alignment)
1179 sequences @ 59 aa
(ave. pairwise identity: 0.28)
(view Jalview alignment from Pfam)
New Hampshire format
(total tree length: 742.21)
nucleotides
(available for above)
1129 sequences @ 177 bp
(ave. pairwise identity: 0.39)
New Hampshire format
(total tree length: 809.23)
amino acids, restricted set
(corresp. to available nt seqs)
1129 sequences @ 59 aa
(ave. pairwise identity: 0.28)
New Hampshire format
(total tree length: 708.17)