EMBL-EBI > Goldman Group

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PANDIT
Protein and Associated NucleotideDomains with Inferred Trees

PF00007 alignment
(20 sequences with 336 bp)


TSHB_ONCMY/19-125 GTGCCCATGTGTGTGCCCACGGAT---------TACACTCTGTATGAGGAGAGACGTGAATGTGACTTCTGCGTGGCCATCAATACGACCATTTGCATGGGCTTCTGCTACTCAAGGGACagtaacATGAAAGAGCTGGCCGGACCACGTTTCCTTATCCAGAGAGGCTGTACCTATGACCAGGTGGAGTACCGAACAGTCATACTACCTGGTTGCCCGCTCCATGCCAACCCTCTCTTCACCTACCCCGTGGCCCTCAGCTGCCACTGTGGC---...ACCTGCAACACAGACAGTGATGAGTGTGCCCACAAGGCCAGCAGTGGAGACGGCGCC
TSHB_HUMAN/19-125 ATGTCTTTTTGTATTCCAACTGAG---------TATACAATGCACATCGAAAGGAGAGAGTGTGCTTATTGCCTAACCATCAACACCACCATCTGTGCTGGATATTGTATGACACGGGATatcaatGGCAAACTGTTTCTTCCCAAATATGCTCTGTCCCAGGATGTTTGCACATATAGAGACTTCATCTACAGGACTGTAGAAATACCAGGATGCCCACTCCATGTTGCTCCCTATTTTTCCTATCCTGTTGCTTTAAGCTGTAAGTGTGGC---...AAGTGCAATACTGACTATAGTGACTGCATACATGAAGCCATCAAGACAAACTACTGT
TSHB_BOVIN/19-125 ATGTCTTTTTGTATTCCAACTGAG---------TATATGATGCATGTCGAAAGGAAAGAATGTGCTTACTGCCTAACCATCAACACCACCGTCTGTGCTGGATATTGTATGACACGGGATgtcaacGGCAAGCTGTTTCTTCCCAAATATGCCCTGTCTCAGGATGTCTGTACATACAGAGACTTCATGTACAAGACTGCAGAAATACCAGGATGCCCACGCCATGTTACTCCTTATTTCTCCTACCCGGTAGCTATAAGCTGTAAGTGTGGC---...AAGTGTAATACTGACTATAGTGATTGTATACATGAGGCCATCAAAACAAACTACTGT
FSHB_RAT/19-123 TGCCATAGCTGTGAACTGACCAAC---------ATCACCATCTCAGTAGAGAAGGAAGAGTGCCGTTTCTGCATAAGCATCAATACCACTTGGTGTGAGGGCTACTGCTACACCAGGGAT......CTGGTGTATAAGGACCCAGCTAGACCAAACACCCAGAAAGTATGCACCTTCAAGGAGCTGGTGTACGAGACCATAAGATTGCCTGGCTGTGCCCGCCACTCAGACTCCCTCTACACATATCCAGTAGCCACTGAATGCCACTGTGGC---...AAGTGTGATAGTGACAGCACCGACTGCACTGTAAGAGGCCTGGGACCCAGCTACTGC
FSHB_BOVIN/18-122 TGCAGAAGCTGCGAGCTGACCAAC---------ATCACCATCACGGTGGAGAAAGAGGAATGTGGCTTCTGCATAAGCATCAACACCACGTGGTGTGCAGGCTACTGCTACACCCGGGAC......TTGGTATACAGGGACCCAGCAAGGCCCAATATCCAGAAAACGTGTACCTTCAAGGAGCTGGTCTACGAGACGGTGAAAGTGCCTGGCTGTGCTCACCATGCAGACTCCCTGTACACGTACCCAGTAGCCACTGAATGTCACTGCAGC---...AAGTGCGACAGCGACAGCACTGACTGCACCGTGAGAGGCCTGGGGCCCAGCTACTGC
GTH2_CTEID/32-136 CTTCCACCATGTGAGCCGGTTAAT---------GAGACTGTCGCGGTGGAAAAAGAGGGCTGTCCAAAATGTCTGGTGTTTCAGACCACCATCTGCAGTGGCCACTGCCTAACAAAGGAG......CCTGTATACAAGAGCCCATTTTCCACTGTCTACCAACACGTGTGCACTTACCGGGACGTCCGCTATGAGACGGTCCGCTTGCCAGACTGTCCCCCCGGGGTGGACCCCCATATCACCTACCCGGTGGCTCTCAGCTGCGACTGCAGC---...CTCTGCACCATGGACACGTCCGACTGTACCATCGAAAGCCTGCAGCCTGATTTCTGC
GTH2_ONCKE/26-130 ATGCAGCCCTGTCAGCCCATCAAC---------CAGACTGTGTCTCTGGAGAAGGAAGGCTGCCCAACGTGCTTAGTCATTCAAACCCCTATCTGCAGTGGCCACTGCGTCACCAAGGAG......CCGGTTTTCAAGAGCCCATTTTCCACCGTGTACCAGCATGTGTGCACCTACCGGGACGTCCGCTATGAAACGATCCGCCTACCTGACTGTCCCCCTTGGGTGGACCCTCATGTCACCTACCCTGTGGCTCTGAGCTGTGACTGCAGC---...CTCTGTAACATGGACACTTCTGACTGTACCATCGAGAGCCTGCAGCCAGACTTCTGC
GTH2_ANGAN/27-131 CTGCTGCCTTGTGAGCCAATCAAT---------GAAACTATTTCTGTGGAGAAAGATGGATGTCCAAAATGTCTGGTGTTCCAAACATCCATCTGCAGTGGTCACTGCATCACCAAGGAC......CCAAGCTACAAGAGCCCGCTGTCCACGGTGTACCAGCGCGTGTGCACCTACCGAGACGTCCGCTACGAGACGGTTCGGCTGCCAGACTGCCGCCCCGGCGTGGATCCCCATGTGACTTTCCCCGTGGCTCTGAGCTGCGACTGTAAC---...CTGTGCACCATGGACACGTCTGACTGCGCCATCCAGAGTCTGAGGCCCGACTTCTGC
GTH2_FUNHE/24-128 CTCCCTCGCTGTCAGCTCCTCAAC---------CAGACAATATCTCTAGAGAAGAGGGGCTGTTCTGGCTGTCACAGAGTGGAAACCACCATCTGCAGCGGGTACTGCGCGACCAAGGAT......CCCAACTATAAGACATCATATAACAAAGCAATCCAGCATGTGTGCACTTATGGGGATTTGTACTACAAGACATTCGAGTTTCCTGAATGTGTGCCCGGAGTTGACCCAGTTGTCACCTACCCCGTTGCCCTGAGCTGCCGCTGTGGA---...GGCTGTGCCATGGCCACATCCGACTGCACCTTCGAGAGCCTTCAGCCTGACTTTTGC
LSHB_HUMAN/26-130 CGGCCATGGTGCCACCCCATCAAT---------GCCATCCTGGCTGTGGAGAAGGAGGGCTGCCCCGTGTGCATCACCGTCAACACCACCATCTGTGCCGGCTACTGCCCCACCATGATG......CGCGTGCTGCAGGCGGTCCTGCCGCCCCTGCCTCAGGTGGTGTGCACCTACCGTGATGTGCGCTTCGAGTCCATCCGGCTCCCTGGCTGCCCGCGTGGCGTGGACCCCGTGGTCTCCTTCCCTGTGGCTCTCAGCTGTCGCTGTGGA---...CCCTGCCGCCGCAGCACCTCTGACTGTGGGGGTCCCAAAGACCACCCCTTGACCTGT
CGHB_HUMAN/26-130 CGGCCACGGTGCCGCCCCATCAAT---------GCCACCCTGGCTGTGGAGAAGGAGGGCTGCCCCGTGTGCATCACCGTCAACACCACCATCTGTGCCGGCTACTGCCCCACCATGACC......CGCGTGCTGCAGGGGGTCCTGCCGGCCCTGCCTCAGGTGGTGTGCAACTACCGCGATGTGCGCTTCGAGTCCATCCGGCTCCCTGGCTGCCCGCGCGGCGTGAACCCCGTGGTCTCCTACGCCGTGGCTCTCAGCTGTCAATGTGCA---...CTCTGCCGCCGCAGCACCACTGACTGCGGGGGTCCCAAGGACCACCCCTTGACCTGT
CGHB_PAPAN/26-130 CGGCCACTGTGCCGCCCCATCAAT---------GCCACCCTGGCTGCCGAGAAGGAGGCCTGTCCCGTGTGCGTCACCGTCAACACCACCATCTGTGCCGGCTACTGCCCCACCATGATG......CGGGTGCTGCAGGCGGTCCTGCCGCCCGTGCCCCAGGTGGTGTGCAACTACCGCGAGGTGCGCTTCGAGTCCATCCGGCTCCCTGGCTGCCCGCCTGGCGTGGACCCCATGGTCTCCGTTCCCGTGGCTCTCAGCTGTCGCTGTGCA---...CTCTGCCGCCGCAGCACCTCTGACTGTGGGGGTCCCAAGGACCACCCTTTGACCTGT
LSHB_HORSE/26-130 CGGCCACTGTGCCGGCCCATCAAC---------GCCACTCTGGCTGCTGAGAAGGAGGCCTGCCCCATCTGCATCACCTTCACCACCAGCATCTGTGCCGGCTACTGCCCCAGCATGGTG......CGGGTGATGCCAGCTGCCCTGCCGGCCATTCCCCAGCCAGTGTGCACCTACCGTGAGCTGCGCTTTGCTTCCATCCGGCTCCCCGGCTGCCCGCCTGGTGTGGACCCCATGGTCTCCTTCCCCGTGGCCCTCAGTTGTCACTGCGGG---...CCCTGCCAGATCAAGACCACTGACTGCGGGGTTTTCAGAGACCAGCCCTTGGCCTGT
GTH1_FUNHE/17-114 TGCTTCGGTTGCCACCTGAAGAAT---------GTCAGCATCCCCATGGAGAGA------TGCGGCCAGAGGGTGTGCATCCACACCACGATCTGCGAAGGGCTGTGCTTCTCTGAGGAC......GCCGTCTTTGAAAGCCCTGACGAGGCGCCTGAGCATAGGGTCTGCAACGGG---GACTGGTCCTACGAGGTGAAACACATCCAGGGGTGTCCGGAAAGC------------ATCACCTACCCCGTGGCCACGAACTGCTACTGCTCT---...GCGTGCAACACCAAAGACACATACTGTACCCGCCTTTATGCACACATACCCAGCTGT
GTH1_ONCKE/29-130 AGGTATGGCTGCCGACTAAACAAC---------ATGACCATCATCGTGGAGAGAGAGGACTGTCACGGA------AGCATCACCATCACCACCTGCGCCGGCCTGTGCGAAACAACGGAC......CTGAACTATCAGAGCACATGGCTGCCGCGCTCCCAGGGAGTGTGTAACTTCAAGGAGTGGTCCTACGAGAAGGTCTACCTGGAAGGCTGTCCATCCGGGGTCGAGCCC---TTCTTCATACCCGTTGCCAAGAGCTGCGATTGCATC---...AAATGCAAGACGGACAACACCGACTGTGATCGCATAAGCATGGCAACACCCAGCTGC
NOV_CHICK/255-348 GGAAAAAAATGTATCCAAACAAAGAAATCCATGAAAGCTGTTCGTTTTGAATACAAGAACTGCACCAGTGTGCAGACTTACAAACCTCGTTACTGT---GGCCTCTGCAAT---------......------------GATGGGCGA---------------------TGCTGTACCCCACACAACACCAAAACGATTCAAGTTGAGTTCCGCTGTCCTCAGGGCAAATTCCTAAAAAAGCCAATGATGTTGATCAATACCTGTGTCTGTCATGGT...AACTGTCCTCAGAGTAACAATGCTTTCTTCCAGCCATTAGATCCCATGTCTAGTGAA
CTGF_HUMAN/253-346 GGCAAAAAGTGCATCCGTACTCCCAAAATCTCCAAGCCTATCAAGTTTGAGCTTTCTGGCTGCACCAGCATGAAGACATACCGAGCTAAATTCTGT---GGAGTATGTACC---------......------------GACGGCCGA---------------------TGCTGCACCCCCCACAGAACCACCACCCTGCCGGTGGAGTTCAAGTGCCCTGACGGCGAGGTCATGAAGAAGAACATGATGTTCATCAAGACCTGTGCCTGCCATTAC...AACTGTCCCGGAGACAATGACATCTTTGAATCGCTGTACTACAGGAAGATGTACGGA
CYR61_MOUSE/281-374 GGCAAGAAATGCAGCAAGACCAAGAAATCCCCAGAACCAGTCAGATTTACTTATGCAGGATGCTCCAGTGTCAAGAAATACCGGCCCAAATACTGC---GGCTCCTGCGTA---------......------------GATGGCCGG---------------------TGCTGCACACCTCTGCAGACCAGAACTGTGAAGATGCGGTTCCGATGCGAAGATGGAGAGATGTTTTCCAAGAATGTCATGATGATCCAGTCCTGCAAATGTAACTAC...AACTGCCCGCATCCCAACGAGGCATCGTTCCGACTGTACAGCCTATTCAATGACATC
CEF10_CHICK/278-371 GGAAAAAAATGTACCAAGACTAAGAAGTCCCCATCCCCTGTAAGGTTTACTTATGCTGGATGCTCCAGTGTGAAGAAGTACCGCCCCAAGTACTGT---GGGTCTTGCGTG---------......------------GATGGCAGG---------------------TGCTGTACTCCCCAGCAGACCAGGACTGTCAAGATCCGTTTCCGCTGCGATGATGGAGAAACCTTCACCAAGAGTGTCATGATGATCCAGTCCTGCCGCTGCAACTAC...AACTGTCCGCATGCAAACGAAGCTTATCCCTTCTACAGACTGGTCAATGACATCCAC
MUC2_HUMAN/5072-5176 AGGGTGCCCTGCTCCACCGTCCCC---------GTCACCACGGAGGTTTCGTACGCCGGCTGCACC------AAGACCGTCCTCATGAATCATTGCTCCGGGTCCTGCGGGACATTTGTC......ATGTACTCGGCCAAGGCCCAGGCCCTGGACCACAGCTGCTCCTGCTGCAAAGAGGAGAAAACCAGCCAGCGTGAGGTGGTCCTGAGCTGCCCCAATGGCGGCTCGCTGACACACACCTACACCCACATCGAGAGCTGCCAGTGCCAGGACaccGTCTGCGGGCTCCCCACCGGCACCTCCCGCCGGGCCCGGCGCTCCCCTAGGCATCTG