IHECRE00004702.6 LIVE IHEC harmonized v2.0 JSON
| Species | Homo sapiens |
| Type | Single donor |
| Status | Partial |
| Project | ENCODE |
| Description | Reference epigenome for human BJ cell line |
| Previous versions | IHECRE00004702.5 IHECRE00004702.4 IHECRE00004702.3 IHECRE00004702.2 IHECRE00004702.1 |
Metadata
| Biomaterial type | cell line |
| Cell line | BJ |
| Biospecimen | |
| Broad label | connective tissue cell |
| Intermediate label | fibroblast derived cell line |
| Curated label | Fibroblast Foreskin |
| Ontology curie | EFO:0002779 |
| Biospecimen disease | |
| Broad label | Healthy/None |
| Ontology curie | NCIM:C0549184 |
| Donor | |
| Type | Single donor |
| Age | unknown |
| Age unit | unknown |
| Life stage | unknown |
| Sex | male |
| Health status ontology curie | NCIM:C0549184 |
Experimental data
| Assay Type | Experiment Type | Archive | Primary ID | Secondary ID | URL |
|---|---|---|---|---|---|
| ChIP-Seq | Histone H3K27me3 | ENCODE | ENCSR000DQG | None | https://www.encodeproject.org/experiments/ENCSR000DQG |
| RNA-Seq | mRNA-Seq | ENCODE | ENCSR000COP | None | https://www.encodeproject.org/experiments/ENCSR000COP |
| ChIP-Seq | ChIP-Seq Input | ENCODE | ENCSR000DQE | None | https://www.encodeproject.org/experiments/ENCSR000DQE |
| ChIP-Seq | Histone H3K36me3 | ENCODE | ENCSR000DQF | None | https://www.encodeproject.org/experiments/ENCSR000DQF |
| ChIP-Seq | Histone H3K4me3 | ENCODE | ENCSR000DQH | None | https://www.encodeproject.org/experiments/ENCSR000DQH |
| DNase-Hypersensitivity | Chromatin Accessibility | ENCODE | ENCSR000EME | None | https://www.encodeproject.org/experiments/ENCSR000EME |
| ChIP-Seq | Transcription Factor | ENCODE | ENCSR000DQI | None | https://www.encodeproject.org/experiments/ENCSR000DQI |