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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Bos taurus and bta-miR-18b

886 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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LOC512883 ENSBTAT00000027788 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074] BY ORTHOLOGY TO:SINFRUT00000128597
16.5462 -20.92 0.00000000920268 532 14 9 38 [+] picture button
LOC532406 ENSBTAT00000020895 PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677]PERQ amino acid rich, with GYF domain 1 [Source:MarkerSymbol;Acc:MGI:1888677] BY ORTHOLOGY TO:ENSMUST00000031727
19.2158 -22.24 0.0000000190509 258 13 6 45 [+] picture button
TM55A_BOVIN ENSBTAT00000014971 Transmembrane protein 55A (EC 3.1.3.-) (Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase II). [Source:Uniprot/SWISSPROT;Acc:Q3SZ48]
17.1193 -19.86 0.0000000290032 600 19 8 37 [+] picture button
XYLT2_BOVIN ENSBTAT00000012247 Xylosyltransferase 2 (EC 2.4.2.26) (Xylosyltransferase II) (Peptide O- xylosyltransferase 2). [Source:Uniprot/SWISSPROT;Acc:Q5QQ49]
15.8461 -18.81 0.0000000527448 600 19 6 33 [+] picture button
LOC529631 ENSBTAT00000006223 Runt-related transcription factor 1 (Core-binding factor, alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL3-3 enhancer factor 1 [Source:Uniprot/SWISSPROT;Acc:Q01196]Runt-related transcription factor 1 (Core-binding factor, alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL3-3 enhancer factor 1 [Source:Uniprot/SWISSPROT;Acc:Q01196] BY ORTHOLOGY TO:ENSMMUT00000002334
15.7633 -12.73 0.0000000536429 600 18 6 32 [+] picture button
LOC540322 ENSBTAT00000006939 wee 1 homolog (S. pombe) [Source:MarkerSymbol;Acc:MGI:103075]wee 1 homolog (S. pombe) [Source:MarkerSymbol;Acc:MGI:103075] BY ORTHOLOGY TO:ENSMUST00000033326
16.8059 -16.58 0.000000066518 600 21 8 57 [+] picture button
LOC615389 ENSBTAT00000013548 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1] BY ORTHOLOGY TO:ENSGACT00000003063
16.8994 -24.02 0.0000000927271 600 17 8 30 [+] picture button
LOC540919 ENSBTAT00000014363 RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203]RIKEN cDNA 2210018M11 gene [Source:MarkerSymbol;Acc:MGI:1924203] BY ORTHOLOGY TO:ENSRNOT00000043788
15.8837 -17.69 0.0000000935425 600 18 8 38 [+] picture button
LOC540823 ENSBTAT00000008649 zinc finger protein 367 [Source:RefSeq_peptide;Acc:NP_710162]zinc finger protein 367 [Source:RefSeq_peptide;Acc:NP_710162] BY ORTHOLOGY TO:ENSGALT00000020615
17.2646 -17.21 0.000000108636 340 16 6 52 [+] picture button
NP_001068955.1 ENSBTAT00000047333 hypothetical protein LOC511056 [Source:RefSeq_peptide;Acc:NP_001068955]
16.2596 -13.95 0.000000310677 273 11 8 45 [+] picture button
LOC539807 ENSBTAT00000026859 NFX1-type zinc finger-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9P2E3]NFX1-type zinc finger-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9P2E3] BY ORTHOLOGY TO:ENSORLT00000007663
16.4419 -26.88 0.000000388582 600 12 8 27 [+] picture button
LOC534612 ENSBTAT00000000273 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39] BY ORTHOLOGY TO:ENSORLT00000015668
17.099 -20.47 0.00000046294 393 18 11 52 [+] picture button
LOC540637 ENSBTAT00000016376 LIM domain and actin-binding protein 1 (Epithelial protein lost in neoplasm). [Source:Uniprot/SWISSPROT;Acc:Q9UHB6]LIM domain and actin-binding protein 1 (Epithelial protein lost in neoplasm). [Source:Uniprot/SWISSPROT;Acc:Q9UHB6] BY ORTHOLOGY TO:ENST00000341247
16.6157 -17.84 0.000000590131 600 18 6 34 [+] picture button
CYGB ENSBTAT00000007304 Cytoglobin (Histoglobin) (HGb) (Stellate cell activation-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q8WWM9]
17.624 -16.02 0.000000602136 230 10 5 24 [+] picture button
NP_001030275.1 ENSBTAT00000017538 aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia) [Source:RefSeq_peptide;Acc:NP_001030275]
15.691 -14.66 0.00000060863 127 6 6 26 [+] picture button
LOC520648 ENSBTAT00000043220 Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25) (Mixed lineage kinase 1). [Source:Uniprot/SWISSPROT;Acc:P80192]Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25) (Mixed lineage kinase 1). [Source:Uniprot/SWISSPROT;Acc:P80192] BY ORTHOLOGY TO:ENSGALT00000020003
16.2311 -23.06 0.000000790173 600 16 8 33 [+] picture button
NP_001015514.2 ENSBTAT00000019449 ets variant gene 6 (TEL oncogene) [Source:RefSeq_peptide;Acc:NP_001015514]
16.1508 -18.03 0.000000814278 534 18 7 33 [+] picture button
NP_001033261.1 ENSBTAT00000013127 hypothetical protein LOC538173 [Source:RefSeq_peptide;Acc:NP_001033261]
15.9431 -17.09 0.000000890767 600 20 6 38 [+] picture button
Q1JPC6_BOVIN ENSBTAT00000004979 Hypothetical protein GRAMD1A (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1JPC6]
17.5217 -18.98 0.000000924767 354 16 8 56 [+] picture button
LOC534542 ENSBTAT00000002469 Potassium voltage-gated channel subfamily H member 7 (Voltage-gated potassium channel subunit Kv11.3) (Ether-a-go-go-related gene potassium channel 3) (HERG-3) (Ether-a-go-go-related protein 3) (Eag- related protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NS40]Potassium voltage-gated channel subfamily H member 7 (Voltage-gated potassium channel subunit Kv11.3) (Ether-a-go-go-related gene potassium channel 3) (HERG-3) (Ether-a-go-go-related protein 3) (Eag- related protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9NS40] BY ORTHOLOGY TO:ENSXETT00000028831
16.9394 -17.17 0.00000108627 600 16 11 31 [+] picture button
LOC540712 ENSBTAT00000025095 F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A) (F-box and leucine-rich repeat protein 3A). [Source:Uniprot/SWISSPROT;Acc:Q9UKT7]F-box/LRR-repeat protein 3 (F-box/LRR-repeat protein 3A) (F-box and leucine-rich repeat protein 3A). [Source:Uniprot/SWISSPROT;Acc:Q9UKT7] BY ORTHOLOGY TO:ENSMMUT00000030204
16.8281 -17.17 0.00000126651 85 4 6 11 [+] picture button
NP_001069809.1 ENSBTAT00000035445 hypothetical protein LOC614701 [Source:RefSeq_peptide;Acc:NP_001069809]
17.4333 -14.43 0.00000143671 453 17 8 41 [+] picture button
LOC509611 ENSBTAT00000020850 Transmembrane and coiled-coil domain-containing protein 3 precursor (Putative LAG1-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q6UWJ1]Transmembrane and coiled-coil domain-containing protein 3 precursor (Putative LAG1-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q6UWJ1] BY ORTHOLOGY TO:ENSORLT00000005931
16.2982 -21.52 0.00000145777 480 14 8 31 [+] picture button
LOC615534 ENSBTAT00000025816 similar to factor for adipocyte differentiation 104 (LOC568274), mRNA [Source:RefSeq_dna;Acc:XR_029307]similar to factor for adipocyte differentiation 104 (LOC568274), mRNA [Source:RefSeq_dna;Acc:XR_029307] BY ORTHOLOGY TO:ENSDART00000087991
18.4199 -19.27 0.00000150993 199 10 7 24 [+] picture button
LOC533928 ENSBTAT00000003678 torsin family 1, member B [Source:MarkerSymbol;Acc:MGI:1353605]torsin family 1, member B [Source:MarkerSymbol;Acc:MGI:1353605] BY ORTHOLOGY TO:ENSMUST00000028199
16.1459 -15.02 0.00000151837 261 13 7 46 [+] picture button
PPCKC_BOVIN ENSBTAT00000002520 Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C). [Source:Uniprot/SWISSPROT;Acc:Q8HYZ4]
16.0682 -14.81 0.00000171381 568 13 5 26 [+] picture button
LOC538624 ENSBTAT00000025495 Fibroblast growth factor receptor substrate 2 (FGFR substrate 2) (Suc1-associated neurotrophic factor target 1) (SNT-1) (FGFR-signaling adaptor SNT). [Source:Uniprot/SWISSPROT;Acc:Q8WU20]Fibroblast growth factor receptor substrate 2 (FGFR substrate 2) (Suc1-associated neurotrophic factor target 1) (SNT-1) (FGFR-signaling adaptor SNT). [Source:Uniprot/SWISSPROT;Acc:Q8WU20] BY ORTHOLOGY TO:ENSORLT00000023677
17.6293 -18.72 0.00000190827 600 14 7 26 [+] picture button
LOC613474 ENSBTAT00000024821 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886] BY ORTHOLOGY TO:ENSPTRT00000023638
15.7064 -16.36 0.0000021175 543 12 5 35 [+] picture button
NP_001030231.1 ENSBTAT00000027229 hypothetical protein LOC508465 [Source:RefSeq_peptide;Acc:NP_001030231]
16.5017 -15.5 0.0000021451 403 14 6 40 [+] picture button
LOC520192 ENSBTAT00000013238 Ephrin type-A receptor 4a (EC 2.7.10.1) (Tyrosine-protein kinase receptor ZEK2) (EPH-like kinase 2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O13148]Ephrin type-A receptor 4a (EC 2.7.10.1) (Tyrosine-protein kinase receptor ZEK2) (EPH-like kinase 2) (Fragment). [Source:Uniprot/SWISSPROT;Acc:O13148] BY ORTHOLOGY TO:ENSDART00000085966
16.6007 -14.35 0.00000233521 311 13 10 33 [+] picture button
LOC540206 ENSBTAT00000022950 Microtubule-associated serine/threonine-protein kinase-like (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:Q96GX5]Microtubule-associated serine/threonine-protein kinase-like (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:Q96GX5] BY ORTHOLOGY TO:ENSXETT00000040639
15.8095 -12.84 0.00000239057 600 13 6 25 [+] picture button
RIC8B ENSBTAT00000029270 Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B). [Source:Uniprot/SWISSPROT;Acc:Q9NVN3]
15.65 -13.57 0.00000258894 315 13 7 35 [+] picture button
NP_001015526.1 ENSBTAT00000044233 1-aminocyclopropane-1-carboxylate synthase [Source:RefSeq_peptide;Acc:NP_001015526]
19.3295 -24.26 0.00000263098 194 10 3 33 [+] picture button
LOC540085 ENSBTAT00000003642 GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480]GRB2-associated-binding protein 1 (GRB2-associated binder 1). [Source:Uniprot/SWISSPROT;Acc:Q13480] BY ORTHOLOGY TO:ENSORLT00000009187
16.7581 -20.61 0.00000291417 600 15 8 28 [+] picture button
CDK2_BOVIN ENSBTAT00000005252 Cell division protein kinase 2 (EC 2.7.11.22). [Source:Uniprot/SWISSPROT;Acc:Q5E9Y0]
16.9418 -21.99 0.00000293733 267 12 4 45 [+] picture button
LOC519695 ENSBTAT00000028266 Fbxl5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2YDQ5]Fbxl5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2YDQ5] BY ORTHOLOGY TO:ENSDART00000063186
16.2683 -16.08 0.00000444008 715 18 7 27 [+] picture button
LOC522442 ENSBTAT00000011991 W02D3.10a [Source:RefSeq_peptide;Acc:NP_001021652]W02D3.10a [Source:RefSeq_peptide;Acc:NP_001021652] BY ORTHOLOGY TO:W02D3.10a
16.6558 -17.93 0.00000518123 636 14 5 19 [+] picture button
LOC515756 ENSBTAT00000037233 Eph receptor B4 [Source:MarkerSymbol;Acc:MGI:104757]Eph receptor B4 [Source:MarkerSymbol;Acc:MGI:104757] BY ORTHOLOGY TO:ENSMUST00000061244
17.9651 -24.38 0.00000538869 246 9 6 49 [+] picture button
Q3SYZ5_BOVIN ENSBTAT00000024514 DDX5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3SYZ5]
16.9418 -17 0.00000937015 300 14 12 54 [+] picture button
LOC511215 ENSBTAT00000005667 Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST) (huHNK-1ST). [Source:Uniprot/SWISSPROT;Acc:O43529]Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST) (huHNK-1ST). [Source:Uniprot/SWISSPROT;Acc:O43529] BY ORTHOLOGY TO:ENSMODT00000001836
16.6007 -18.69 0.00000956433 174 8 5 21 [+] picture button
LOC527058 ENSBTAT00000026252 Zinc finger protein Rlf (Rearranged L-myc fusion gene protein) (Zn-15- related protein). [Source:Uniprot/SWISSPROT;Acc:Q13129]Zinc finger protein Rlf (Rearranged L-myc fusion gene protein) (Zn-15- related protein). [Source:Uniprot/SWISSPROT;Acc:Q13129] BY ORTHOLOGY TO:ENSMMUT00000047365
15.8095 -16.51 0.0000106383 600 21 8 35 [+] picture button
LOC540132 ENSBTAT00000018281 Tetraspanin-9 (Tspan-9) (Tetraspan NET-5). [Source:Uniprot/SWISSPROT;Acc:O75954]Tetraspanin-9 (Tspan-9) (Tetraspan NET-5). [Source:Uniprot/SWISSPROT;Acc:O75954] BY ORTHOLOGY TO:ENST00000011898
15.8047 -13.98 0.0000107409 142 7 2 19 [+] picture button
LOC533166 ENSBTAT00000019457 LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2]LR11 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9R0N2] BY ORTHOLOGY TO:ENSRNOT00000059974
18.4199 -17.97 0.0000109622 183 7 7 29 [+] picture button
LOC512180 ENSBTAT00000000106 RIKEN cDNA 4732418C07 gene [Source:MarkerSymbol;Acc:MGI:2442397]RIKEN cDNA 4732418C07 gene [Source:MarkerSymbol;Acc:MGI:2442397] BY ORTHOLOGY TO:ENSRNOT00000013471
16.8133 -16.95 0.0000119669 548 14 3 27 [+] picture button
NAGK_BOVIN ENSBTAT00000019528 N-acetylglucosamine kinase (EC 2.7.1.59) (GlcNAc kinase). [Source:Uniprot/SWISSPROT;Acc:Q3SZM9]
17.2829 -12.37 0.0000124887 151 5 7 18 [+] picture button
LOC511273 ENSBTAT00000028441 kinesin family member 5A [Source:MarkerSymbol;Acc:MGI:109564]kinesin family member 5A [Source:MarkerSymbol;Acc:MGI:109564] BY ORTHOLOGY TO:ENSMUST00000099172
16.6007 -18.96 0.0000135909 600 4 5 15 [+] picture button
Q3ZBR8_BOVIN ENSBTAT00000015044 LOC508805 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q3ZBR8]
16.0498 -15.26 0.000014111 600 13 4 33 [+] picture button
NP_001035634.1 ENSBTAT00000023084 hypothetical protein LOC522854 [Source:RefSeq_peptide;Acc:NP_001035634]
16.1459 -16.59 0.0000142243 213 12 8 53 [+] picture button
LOC539779 ENSBTAT00000003382 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A4IG70]Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A4IG70] BY ORTHOLOGY TO:ENSDART00000089135
15.9185 -14.53 0.0000156139 180 8 2 13 [+] picture button
LOC539601 ENSBTAT00000039766 FCH and double SH3 domains protein 2 (SH3 multiple domains 3) (Carom). [Source:Uniprot/SWISSPROT;Acc:O94868]FCH and double SH3 domains protein 2 (SH3 multiple domains 3) (Carom). [Source:Uniprot/SWISSPROT;Acc:O94868] BY ORTHOLOGY TO:ENSMODT00000009769
17.5103 -14.78 0.0000158932 82 4 4 9 [+] picture button

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Download table: GFF TXT
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