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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and xtr-miR-33a

803 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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GLRA1 ENSGACT00000022301 Glycine receptor subunit alpha-1 precursor (Glycine receptor 48 kDa subunit) (Glycine receptor strychnine-binding subunit). [Source:Uniprot/SWISSPROT;Acc:P23415]
19.7094 -21.33 0.0000000215866 500 1 4 6 [+] picture button
HAS3 ENSGACT00000018624 Hyaluronan synthase 3 (EC 2.4.1.212) (Hyaluronate synthase 3) (Hyaluronic acid synthase 3) (HA synthase 3). [Source:Uniprot/SWISSPROT;Acc:O00219]
17.2507 -21.56 0.00000040461 500 8 1 13 [+] picture button
KCNA1 ENSGACT00000005690 Potassium voltage-gated channel subfamily A member 1 (Voltage-gated potassium channel subunit Kv1.1) (HUKI) (HBK1). [Source:Uniprot/SWISSPROT;Acc:Q09470]
16.6397 -14.9 0.000000477981 500 5 5 5 [+] picture button
TAF12 ENSGACT00000018530 Transcription initiation factor TFIID subunit 12 (Transcription initiation factor TFIID 20/15 kDa subunits) (TAFII-20/TAFII-15) (TAFII20/TAFII15). [Source:Uniprot/SWISSPROT;Acc:Q16514]
16.3655 -11 0.000000712176 535 6 5 7 [+] picture button
CBWD5 ENSGACT00000009417 COBW domain-containing protein 5. [Source:Uniprot/SPTREMBL;Acc:Q5RIA9]
17.563 -14.75 0.000000733628 512 7 1 8 [+] picture button
TGS1 ENSGACT00000019482 Trimethylguanosine synthase homolog (EC 2.1.1.-) (Nuclear receptor coactivator 6-interacting protein) (PRIP-interacting protein with methyltransferase motif) (PIPMT) (PIMT) (CLL-associated antigen KW-2) (Hepatocellular carcinoma-associated antigen 137). [Source:Uniprot/SWISSPROT;Acc:Q96RS0]
17.2507 -17.71 0.000001 500 15 1 4 [+] picture button
ENSGACT00000024616 NOT ANNOTATED
17.5782 -15.25 0.000001 500 7 1 3 [+] picture button
ENSGACT00000022032 NOT ANNOTATED
17.0323 -15.98 0.000001 500 10 1 3 [+] picture button
RDH8 (1 of 2) ENSGACT00000021872 retinol dehydrogenase 8 (all-trans) [Source:RefSeq_peptide;Acc:NP_056540]
18.8884 -20.33 0.00000137492 500 5 2 8 [+] picture button
C21orf6 ENSGACT00000015651 Uncharacterized protein C21orf6. [Source:Uniprot/SWISSPROT;Acc:P57060]
16.7755 -12.72 0.00000162734 427 5 2 13 [+] picture button
ABCA1 (1 of 4) ENSGACT00000024620 ATP-binding cassette sub-family A member 1 (ATP-binding cassette transporter 1) (ATP-binding cassette 1) (ABC-1) (Cholesterol efflux regulatory protein). [Source:Uniprot/SWISSPROT;Acc:O95477]
19.1005 -20.75 0.00000217984 500 3 4 3 [+] picture button
HAGH ENSGACT00000015742 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) (Glyoxalase II) (GLX II). [Source:Uniprot/SWISSPROT;Acc:Q16775]
16.2449 -9.76 0.00000395152 396 5 1 6 [+] picture button
KCNJ12 (1 of 2) ENSGACT00000011312 ATP-sensitive inward rectifier potassium channel 12 (Potassium channel, inwardly rectifying subfamily J member 12) (Inward rectifier K(+) channel Kir2.2) (Kir2.2v) (IRK2). [Source:Uniprot/SWISSPROT;Acc:Q14500]
16.814 -15.37 0.00000574349 500 5 5 5 [+] picture button
NUP35 ENSGACT00000010875 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin) (Mitotic phosphoprotein 44) (MP-44). [Source:Uniprot/SWISSPROT;Acc:Q8NFH5]
17.4602 -12.81 0.00000718441 204 7 4 9 [+] picture button
DUS4L ENSGACT00000011615 tRNA-dihydrouridine synthase 4-like (EC 1.-.-.-) (PP35). [Source:Uniprot/SWISSPROT;Acc:O95620]
16.2968 -13.11 0.00000777811 500 7 2 8 [+] picture button
ICT1 ENSGACT00000006652 Immature colon carcinoma transcript 1 protein precursor (Digestion substraction 1) (DS-1). [Source:Uniprot/SWISSPROT;Acc:Q14197]
16.2681 -12.89 0.00000911318 500 8 1 12 [+] picture button
CACNA1D (2 of 2) ENSGACT00000002103 Voltage-dependent L-type calcium channel subunit alpha-1D (Voltage- gated calcium channel subunit alpha Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2). [Source:Uniprot/SWISSPROT;Acc:Q01668]
17.2907 -16.21 0.0000102912 500 5 5 8 [+] picture button
SLC46A1 ENSGACT00000011385 Heme carrier protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96NT5]
17.1415 -17.12 0.0000108165 500 4 1 10 [+] picture button
CHAC2 ENSGACT00000003567 ChaC, cation transport regulator-like 2 [Source:RefSeq_peptide;Acc:NP_001008708]
17.3446 -13.79 0.0000115026 311 3 2 4 [+] picture button
Q6ZSY1_HUMAN (2 of 2) ENSGACT00000010247 CDNA FLJ45135 fis, clone BRAWH3038252, highly similar to Formin 1 isoform IV. [Source:Uniprot/SPTREMBL;Acc:Q6ZSY1]
16.5956 -12.77 0.0000115604 500 3 1 3 [+] picture button
ENSGACT00000003661 Homolog of Ictalurus punctatus "Delayed rectifier potassium channel Kv2. [Source:Uniprot/SPTREMBL;Acc:Q98SV4]"Homolog of Ictalurus punctatus "Delayed rectifier potassium channel Kv2. [Source:Uniprot/SPTREMBL;Acc:Q98SV4]" BY ORTHOLOGY TO:SINFRUT00000166856
19.4343 -19.81 0.0000147962 500 5 3 5 [+] picture button
ENSGACT00000011537 Homolog of Homo sapiens "Hyaluronidase 4 [Source:IPI;Acc:IPI00099438]"Homolog of Homo sapiens "Hyaluronidase 4 [Source:IPI;Acc:IPI00099438]" BY ORTHOLOGY TO:SINFRUT00000183074
17.9559 -13.39 0.00001488 500 4 1 5 [+] picture button
DGCR8 ENSGACT00000017185 Protein DGCR8 (DiGeorge syndrome critical region 8). [Source:Uniprot/SWISSPROT;Acc:Q8WYQ5]
16.5956 -17.25 0.0000182969 500 4 2 4 [+] picture button
MMP2 ENSGACT00000022059 72 kDa type IV collagenase precursor (EC 3.4.24.24) (72 kDa gelatinase) (Matrix metalloproteinase-2) (MMP-2) (Gelatinase A) (TBE- 1). [Source:Uniprot/SWISSPROT;Acc:P08253]
16.5956 -14.6 0.0000184241 500 8 2 10 [+] picture button
PRKCI ENSGACT00000022454 Protein kinase C iota type (EC 2.7.11.13) (nPKC-iota) (Atypical protein kinase C-lambda/iota) (aPKC-lambda/iota) (PRKC-lambda/iota). [Source:Uniprot/SWISSPROT;Acc:P41743]
16.3965 -12.2 0.0000197475 704 5 2 5 [+] picture button
TNIP2 ENSGACT00000022276 A20-binding inhibitor of NF-kappaB activation 2 [Source:RefSeq_peptide;Acc:NP_077285]
16.4319 -12.36 0.0000236596 500 5 4 7 [+] picture button
SOD3 ENSGACT00000023619 Extracellular superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) (EC-SOD). [Source:Uniprot/SWISSPROT;Acc:P08294]
19.0791 -14.28 0.0000238863 215 5 2 6 [+] picture button
NP_001006948.1 ENSGACT00000026273 RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888]RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888] BY ORTHOLOGY TO:ENSMUST00000020112
16.4196 -9.29 0.0000286427 500 6 1 8 [+] picture button
STYX ENSGACT00000021618 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
17.0106 -13.97 0.0000298852 500 12 7 20 [+] picture button
MLC1 ENSGACT00000017836 Membrane protein MLC1. [Source:Uniprot/SWISSPROT;Acc:Q15049]
17.294 -13.08 0.0000425283 326 6 2 9 [+] picture button
SARM1 ENSGACT00000011379 Sterile alpha and TIR motif-containing protein 1 (Sterile alpha and Armadillo repeat protein) (Tir-1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6SZW1]
17.9058 -19.66 0.0000447487 500 6 2 6 [+] picture button
LBXCOR1 (2 of 2) ENSGACT00000006846 Ladybird homeobox corepressor 1. [Source:Uniprot/SWISSPROT;Acc:P84550]
16.2918 -12.3 0.0000448414 500 5 8 15 [+] picture button
FN3K ENSGACT00000014104 Fructosamine-3-kinase (EC 2.7.1.-). [Source:Uniprot/SWISSPROT;Acc:Q9H479]
17.4691 -14.26 0.0000457678 500 6 1 7 [+] picture button
MBIP ENSGACT00000014972 MAP3K12-binding inhibitory protein 1 (MAPK upstream kinase-binding inhibitory protein) (MUK-binding inhibitory protein). [Source:Uniprot/SWISSPROT;Acc:Q9NS73]
17.8071 -16.42 0.0000470189 70 3 2 5 [+] picture button
KIAA1754 ENSGACT00000012267 KIAA1754 (KIAA1754), mRNA [Source:RefSeq_dna;Acc:NM_033397]
17.7966 -17.63 0.0000516135 500 4 2 5 [+] picture button
THOC4 ENSGACT00000017655 THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF). [Source:Uniprot/SWISSPROT;Acc:Q86V81]
16.7849 -16.51 0.0000554567 530 10 4 11 [+] picture button
RALGPS1 ENSGACT00000024238 Ral GEF with PH domain and SH3 binding motif 1 [Source:RefSeq_peptide;Acc:NP_055451]
17.3599 -15.04 0.000058526 500 7 1 11 [+] picture button
CDR2L (2 of 2) ENSGACT00000017602 paraneoplastic antigen [Source:RefSeq_peptide;Acc:NP_055418]
16.4196 -12.76 0.0000598734 500 2 1 2 [+] picture button
C7orf48 ENSGACT00000018678 Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73]
16.3773 -13.28 0.0000610029 500 3 2 4 [+] picture button
TPCN1 ENSGACT00000012608 Two-pore calcium channel protein 1 (Voltage-dependent calcium channel protein TPC1). [Source:Uniprot/SWISSPROT;Acc:Q9ULQ1]
18.5133 -22.21 0.0000644119 485 4 2 5 [+] picture button
C1QTNF3 ENSGACT00000021550 Complement C1q tumor necrosis factor-related protein 3 precursor (Secretory protein CORS26). [Source:Uniprot/SWISSPROT;Acc:Q9BXJ4]
16.814 -16.38 0.0000672268 500 4 1 8 [+] picture button
SLC39A8 ENSGACT00000006599 solute carrier family 39 (zinc transporter), member 8 [Source:RefSeq_peptide;Acc:NP_071437]
16.9977 -9.93 0.0000698027 207 5 2 5 [+] picture button
C9orf19 ENSGACT00000011752 Golgi-associated plant pathogenesis-related protein 1 (Golgi- associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2). [Source:Uniprot/SWISSPROT;Acc:Q9H4G4]
17.1177 -10.88 0.0000714042 435 9 1 13 [+] picture button
ARFGAP3 ENSGACT00000026285 ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3). [Source:Uniprot/SWISSPROT;Acc:Q9NP61]
16.2615 -10.55 0.0000742879 347 4 2 9 [+] picture button
CHFR ENSGACT00000017090 E3 ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint with forkhead and RING finger domains protein) (RING finger protein 196). [Source:Uniprot/SWISSPROT;Acc:Q96EP1]
16.3773 -14.62 0.0000742906 500 3 3 3 [+] picture button
CRTAM ENSGACT00000026628 class-I MHC-restricted T cell associated molecule [Source:RefSeq_peptide;Acc:NP_062550]
18.3425 -17.97 0.0000769364 500 3 1 4 [+] picture button
XR_019154.1 ENSGACT00000008610 similar to Cytosolic acyl coenzyme A thioester hydrolase (Long chain acyl-CoA thioester hydrolase) (CTE-II) (CTE-IIa) (Brain acyl-CoA hydrolase) (Acyl-CoA thioesterase 7) (LOC651788), mRNA [Source:RefSeq_dna;Acc:XR_019154]
17.5357 -12.85 0.000082393 306 7 1 9 [+] picture button
TYR (2 of 2) ENSGACT00000010570 Tyrosinase precursor (EC 1.14.18.1) (Monophenol monooxygenase) (Tumor rejection antigen AB) (SK29-AB) (LB24-AB). [Source:Uniprot/SWISSPROT;Acc:P14679]
17.4602 -12.71 0.0000854533 96 2 4 5 [+] picture button
HERC3 ENSGACT00000022914 Probable E3 ubiquitin-protein ligase HERC3 (EC 6.3.2.-) (HECT domain and RCC1-like domain-containing protein 3). [Source:Uniprot/SWISSPROT;Acc:Q15034]
16.5352 -18.14 0.000089357 120 2 2 9 [+] picture button
DLGAP4 (1 of 2) ENSGACT00000010803 Disks large-associated protein 4 (DAP-4) (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y2H0]
16.5956 -13.87 0.000105526 500 8 4 9 [+] picture button

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Download table: GFF TXT
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