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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and xtr-miR-106

861 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DOCK4 ENSGACT00000025068 Dedicator of cytokinesis protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8N1I0]
17.477 -15.79 0.000000000183755 500 4 5 10 [+] picture button
NP_219485.1 ENSGACT00000015355 sarcoma antigen NY-SAR-48 isoform a [Source:RefSeq_peptide;Acc:NP_219485]
17.5211 -13.96 0.00000000360107 484 3 7 7 [+] picture button
OBFC2A ENSGACT00000003011 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
17.7426 -18.13 0.00000000820896 500 6 2 9 [+] picture button
GPR6 ENSGACT00000015257 Sphingosine 1-phosphate receptor GPR6 (G-protein coupled receptor 6). [Source:Uniprot/SWISSPROT;Acc:P46095]
18.1986 -18.79 0.0000000119799 500 7 9 12 [+] picture button
CLIP4 ENSGACT00000016988 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.8863 -14.43 0.0000000129349 500 7 9 18 [+] picture button
ARHGEF4 ENSGACT00000000134 Rho guanine nucleotide exchange factor 4 (APC-stimulated guanine nucleotide exchange factor) (Asef). [Source:Uniprot/SWISSPROT;Acc:Q9NR80]
17.5669 -16.97 0.000000022527 500 9 2 18 [+] picture button
HS3ST5 ENSGACT00000008390 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
16.8216 -13.4 0.0000000326774 500 5 2 10 [+] picture button
PRR16 ENSGACT00000008321 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]
16.6155 -15.43 0.0000000386629 500 4 11 6 [+] picture button
PDE3B ENSGACT00000020663 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
16.5555 -12.08 0.00000005635 500 9 11 12 [+] picture button
MAP3K9 ENSGACT00000016074 Mitogen-activated protein kinase kinase kinase 9 (EC 2.7.11.25) (Mixed lineage kinase 1). [Source:Uniprot/SWISSPROT;Acc:P80192]
17.1893 -14.63 0.0000000695417 500 4 3 7 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
16.8216 -19.19 0.0000000837752 500 8 3 14 [+] picture button
PTPN4 ENSGACT00000010366 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
16.9837 -18.68 0.0000000900708 500 7 4 15 [+] picture button
ZC3H12C (2 of 2) ENSGACT00000001736 Zinc finger CCCH-type-containing protein 12C (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9C0D7]
16.6633 -22.57 0.000000142 500 8 3 15 [+] picture button
RNF6 ENSGACT00000004164 RING finger protein 6 (RING-H2 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y252]
16.7549 -17.57 0.000000221901 500 6 3 8 [+] picture button
Q96CK5_HUMAN ENSGACT00000012060 Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]"Homolog of Homo sapiens "PREDICTED "KIAA0226 gene product [Source:IPI;Acc:IPI00022496]" BY ORTHOLOGY TO:SINFRUT00000163195
17.1743 -10.67 0.000000516908 500 7 3 10 [+] picture button
EPHA4 ENSGACT00000000128 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.4533 -13.41 0.000000599924 500 5 10 8 [+] picture button
FBXL5 ENSGACT00000018611 F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA1]
17.4604 -17.7 0.000000910042 500 1 3 5 [+] picture button
PLEKHB2 ENSGACT00000014629 Pleckstrin homology domain-containing family B member 2 (Evectin-2). [Source:Uniprot/SWISSPROT;Acc:Q96CS7]
18.3947 -22.34 0.000000915343 500 2 2 7 [+] picture button
DDEF2 ENSGACT00000011859 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
18.8445 -17.93 0.00000108311 500 7 3 10 [+] picture button
ARID4B ENSGACT00000005700 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
18.2528 -21.23 0.00000146541 500 5 11 10 [+] picture button
PERQ1 ENSGACT00000026373 PERQ amino acid-rich with GYF domain-containing protein 1 (Grb10- interacting GYF protein 1). [Source:Uniprot/SWISSPROT;Acc:O75420]
17.7679 -15.94 0.00000191527 500 7 3 15 [+] picture button
ALAS2 ENSGACT00000009067 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
20.0409 -26.7 0.00000212053 261 5 3 11 [+] picture button
SRCRB4D ENSGACT00000026788 scavenger receptor cysteine rich domain containing, group B (4 domains) [Source:RefSeq_peptide;Acc:NP_542782]
18.5251 -23.86 0.00000231872 500 4 4 10 [+] picture button
STYX ENSGACT00000021618 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
17.0134 -14.89 0.00000232692 500 12 7 20 [+] picture button
FNDC1 ENSGACT00000011900 Fibronectin type III domain-containing protein 1 (Expressed in synovial lining protein) (Activation-associated cDNA protein). [Source:Uniprot/SWISSPROT;Acc:Q4ZHG4]
17.4104 -13.1 0.0000026299 513 8 4 18 [+] picture button
NBEAL2 ENSGACT00000011451 SQFE253. [Source:Uniprot/SPTREMBL;Acc:Q6UX91]
16.8557 -19.49 0.0000027736 636 7 7 13 [+] picture button
WNT9A ENSGACT00000023074 Protein Wnt-9a precursor (Wnt-14). [Source:Uniprot/SWISSPROT;Acc:O14904]
17.3213 -15.23 0.00000306375 500 5 5 10 [+] picture button
ZNF367 ENSGACT00000008912 zinc finger protein 367 [Source:RefSeq_peptide;Acc:NP_710162]
17.9684 -17.98 0.00000401023 500 4 4 13 [+] picture button
SC4MOL ENSGACT00000022474 C-4 methylsterol oxidase (EC 1.14.13.72) (Methylsterol monooxygenase). [Source:Uniprot/SWISSPROT;Acc:Q15800]
18.6898 -20.07 0.00000466374 300 3 1 10 [+] picture button
C6orf130 ENSGACT00000004416 Uncharacterized protein C6orf130. [Source:Uniprot/SWISSPROT;Acc:Q9Y530]
17.3189 -13.81 0.00000510219 500 3 2 7 [+] picture button
DENR ENSGACT00000020641 Density-regulated protein (DRP) (Protein DRP1) (Smooth muscle cell- associated protein 3) (SMAP-3). [Source:Uniprot/SWISSPROT;Acc:O43583]
17.6765 -11.08 0.00000525617 280 3 3 8 [+] picture button
DAGLB ENSGACT00000006607 Sn1-specific diacylglycerol lipase beta (EC 3.1.1.-) (DGL-beta) (KCCR13L). [Source:Uniprot/SWISSPROT;Acc:Q8NCG7]
16.3958 -9.69 0.00000676144 500 8 2 12 [+] picture button
IRF2BP2 ENSGACT00000005734 interferon regulatory factor 2 binding protein 2 isoform B [Source:RefSeq_peptide;Acc:NP_001070865]
17.7811 -20.99 0.00000729773 399 7 9 15 [+] picture button
SNAI2 ENSGACT00000023739 Zinc finger protein SLUG (Neural crest transcription factor Slug) (Snail homolog 2). [Source:Uniprot/SWISSPROT;Acc:O43623]
19.8747 -26.87 0.00000736149 500 9 4 14 [+] picture button
ULK2 ENSGACT00000017924 Serine/threonine-protein kinase ULK2 (EC 2.7.11.1) (Unc-51-like kinase 2). [Source:Uniprot/SWISSPROT;Acc:Q8IYT8]
18.1038 -20.84 0.00000813601 500 3 2 8 [+] picture button
CPEB3 ENSGACT00000003864 Cytoplasmic polyadenylation element-binding protein 3 (CPE-binding protein 3) (CPE-BP3) (hCPEB-3). [Source:Uniprot/SWISSPROT;Acc:Q8NE35]
16.9458 -15.83 0.00000834312 500 4 1 11 [+] picture button
ENSGACT00000010977 Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]"Homolog of Gallus gallus "Serine/threonine-protein kinase SNF1-like kinase 2 (EC 2.7.1.37) (Qin- induced kinase). [Source:Uniprot/SWISSPROT;Acc:Q9IA88]" BY ORTHOLOGY TO:SINFRUT00000149706
17.4258 -18.84 0.00000877531 500 7 3 12 [+] picture button
TBX3 ENSGACT00000022201 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
16.5196 -11.23 0.0000121489 500 4 4 9 [+] picture button
BICC1 ENSGACT00000013301 Protein bicaudal C homolog 1 (Bic-C). [Source:Uniprot/SWISSPROT;Acc:Q9H694]
16.917 -10.68 0.0000125296 500 8 3 14 [+] picture button
NUP35 ENSGACT00000010875 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin) (Mitotic phosphoprotein 44) (MP-44). [Source:Uniprot/SWISSPROT;Acc:Q8NFH5]
16.438 -10 0.0000140697 204 7 4 9 [+] picture button
ANUBL1 ENSGACT00000010290 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
16.6409 -10.5 0.0000146782 450 8 3 19 [+] picture button
hCG_1642425 ENSGACT00000016924 Homolog of Danio rerio "Mitochondrial glycine cleavage system H protein [Source:IPI;Acc:IPI00511586]"Homolog of Danio rerio "Mitochondrial glycine cleavage system H protein [Source:IPI;Acc:IPI00511586]" BY ORTHOLOGY TO:SINFRUT00000129950
17.7891 -16.11 0.0000162176 264 5 2 12 [+] picture button
TARBP2 ENSGACT00000008823 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.777 -15.3 0.00001875 500 3 7 6 [+] picture button
ARSE ENSGACT00000008381 Arylsulfatase E precursor (EC 3.1.6.-) (ASE). [Source:Uniprot/SWISSPROT;Acc:P51690]
16.8764 -14.49 0.0000205355 500 5 1 8 [+] picture button
PKNOX1 ENSGACT00000001886 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
16.9064 -14.86 0.0000218825 500 5 4 9 [+] picture button
USP46 ENSGACT00000018813 Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.1.2.15) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46) (Deubiquitinating enzyme 46). [Source:Uniprot/SWISSPROT;Acc:P62068]
17.3778 -24.69 0.0000221292 500 6 2 10 [+] picture button
NP_055919.1 ENSGACT00000022450 EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6]EH-domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q641Z6] BY ORTHOLOGY TO:ENSRNOT00000028547
17.4731 -16.48 0.000022242 500 6 3 11 [+] picture button
ENSGACT00000023221 PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436]PREDICTED: similar to hypothetical protein [Source:RefSeq_peptide_predicted;Acc:XP_376334] [from human gene ENSG00000188436] BY ORTHOLOGY TO:ENSXETT00000030786
17.2791 -20.93 0.0000240373 368 3 3 10 [+] picture button
LRRC62 (2 of 2) ENSGACT00000000993 Leucine-rich repeat and fibronectin type-III domain-containing protein 6 precursor (Leucine-rich repeat-containing protein 62). [Source:Uniprot/SWISSPROT;Acc:Q5R3F8]
17.3818 -18.37 0.0000245472 500 4 4 7 [+] picture button
NP_071745.1 ENSGACT00000012940 leukocyte-derived arginine aminopeptidase [Source:RefSeq_peptide;Acc:NP_071745]
18.8024 -17.13 0.0000262395 226 5 2 15 [+] picture button

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Download table: GFF TXT
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