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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-24

884 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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WHSC1 (2 of 2) ENSGACT00000024022 Probable histone-lysine N-methyltransferase NSD2 (EC 2.1.1.43) (Nuclear SET domain-containing protein 2) (Wolf-Hirschhorn syndrome candidate 1 protein) (Multiple myeloma SET domain-containing protein) (Protein trithorax-5). [Source:Uniprot/SWISSPROT;Acc:O96028]
16.0288 -21.23 0.000000522747 500 5 4 8 [+] picture button
ENSGACT00000018051 NOT ANNOTATED
16.6868 -22.08 0.000001 522 4 1 1 [+] picture button
ST6GAL2 ENSGACT00000004036 beta-galactoside alpha-2,6-sialyltransferase II [Source:RefSeq_peptide;Acc:NP_115917]
17.9012 -25.52 0.00000144842 500 4 4 7 [+] picture button
EDG1 ENSGACT00000017925 Sphingosine 1-phosphate receptor Edg-1 (Sphingosine 1-phosphate receptor 1) (S1P1). [Source:Uniprot/SWISSPROT;Acc:P21453]
16.4397 -20.31 0.00000164077 500 7 1 6 [+] picture button
PIGT ENSGACT00000009219 GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2]
16.0256 -21.65 0.00000253052 475 6 2 9 [+] picture button
ZSWIM5 ENSGACT00000018996 Zinc finger SWIM domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9P217]
16.2267 -17.66 0.00000338502 500 8 4 11 [+] picture button
LMO1 (1 of 2) ENSGACT00000020682 Rhombotin-1 (LIM domain only protein 1) (Cysteine-rich protein TTG-1) (T-cell translocation protein 1). [Source:Uniprot/SWISSPROT;Acc:P25800]
17.6667 -28.88 0.0000046729 635 2 6 2 [+] picture button
CARD9 ENSGACT00000020823 Caspase recruitment domain-containing protein 9 (hCARD9). [Source:Uniprot/SWISSPROT;Acc:Q9H257]
15.9172 -22.57 0.00000676234 500 7 3 8 [+] picture button
NCLN ENSGACT00000013982 Nicalin precursor (Nicastrin-like protein). [Source:Uniprot/SWISSPROT;Acc:Q969V3]
16.4098 -22.93 0.00000733228 500 5 2 6 [+] picture button
TSHZ1 (2 of 2) ENSGACT00000005176 Teashirt homolog 1 (Serologically defined colon cancer antigen 3) (Antigen NY-CO-33). [Source:Uniprot/SWISSPROT;Acc:Q6ZSZ6]
17.0084 -22.18 0.00000758893 500 8 13 13 [+] picture button
C6orf32 ENSGACT00000006225 Diff48 protein. [Source:Uniprot/SPTREMBL;Acc:Q13529]
17.8386 -25.67 0.00000822685 500 5 3 5 [+] picture button
PPP2R2D ENSGACT00000012609 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform). [Source:Uniprot/SWISSPROT;Acc:Q66LE6]
16.6522 -20.98 0.00000856553 500 2 3 2 [+] picture button
SURF2 ENSGACT00000022035 Surfeit locus protein 2 (Surf-2). [Source:Uniprot/SWISSPROT;Acc:Q15527]
16.487 -21.05 0.00000949034 275 5 1 12 [+] picture button
NP_835227.1 ENSGACT00000011200 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
18.2534 -25.38 0.0000128652 500 8 5 10 [+] picture button
DDB2 ENSGACT00000006964 DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2) (DDB p48 subunit) (DDBb) (UV-damaged DNA-binding protein 2) (UV-DDB 2). [Source:Uniprot/SWISSPROT;Acc:Q92466]
16.5491 -24.33 0.0000133432 500 5 3 5 [+] picture button
ENC1 ENSGACT00000021004 Ectoderm-neural cortex protein 1 (ENC-1) (p53-induced protein 10) (Nuclear matrix protein NRP/B). [Source:Uniprot/SWISSPROT;Acc:O14682]
15.8547 -16.87 0.0000157435 413 6 1 6 [+] picture button
KIAA0319L ENSGACT00000003498 polycystic kidney disease 1-like isoform a [Source:RefSeq_peptide;Acc:NP_079150]
17.4088 -26.8 0.0000206425 500 4 2 4 [+] picture button
MAN1A1 ENSGACT00000009002 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase). [Source:Uniprot/SWISSPROT;Acc:P33908]
17.9812 -23.01 0.0000212769 500 5 2 7 [+] picture button
RAP1A ENSGACT00000008172 Ras-related protein Rap-1A precursor (GTP-binding protein smg-p21A) (Ras-related protein Krev-1) (C21KG) (G-22K). [Source:Uniprot/SWISSPROT;Acc:P62834]
17.624 -22.76 0.0000254457 252 3 5 5 [+] picture button
MED19 ENSGACT00000023592 mediator of RNA polymerase II transcription, subunit 19 homolog [Source:RefSeq_peptide;Acc:NP_703151]
16.0322 -17.87 0.000028283 435 9 2 17 [+] picture button
PPIL3 ENSGACT00000018589 Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (Cyclophilin J) (CyPJ). [Source:Uniprot/SWISSPROT;Acc:Q9H2H8]
16.0751 -15.23 0.0000304695 500 5 2 8 [+] picture button
UBXD1 ENSGACT00000019083 UBX domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BZV1]
20.8077 -28.67 0.0000306551 163 4 1 5 [+] picture button
RCC1 ENSGACT00000009745 Regulator of chromosome condensation (Chromosome condensation protein 1) (Cell cycle regulatory protein). [Source:Uniprot/SWISSPROT;Acc:P18754]
15.8867 -21.52 0.0000332313 554 9 2 10 [+] picture button
SLC35B2 ENSGACT00000017914 Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS transporter 1) (Solute carrier family 35 member B2) (Putative MAPK-activating protein PM15) (Putative NF-kappa-B-activating protein 48). [Source:Uniprot/SWISSPROT;Acc:Q8TB61]
16.8715 -23.26 0.0000362536 500 4 2 6 [+] picture button
MOBKL2C ENSGACT00000015760 Mps one binder kinase activator-like 2C (Mob1 homolog 2C) (Protein Mob3C). [Source:Uniprot/SWISSPROT;Acc:Q70IA8]
16.3878 -17.29 0.0000471556 500 3 2 5 [+] picture button
ABCC3 ENSGACT00000007854 Canalicular multispecific organic anion transporter 2 (ATP-binding cassette sub-family C member 3) (Multidrug resistance-associated protein 3) (Multi-specific organic anion transporter-D) (MOAT-D). [Source:Uniprot/SWISSPROT;Acc:O15438]
15.8201 -19.2 0.0000509151 489 8 3 12 [+] picture button
KIAA1543 ENSGACT00000013194 Uncharacterized protein KIAA1543. [Source:Uniprot/SWISSPROT;Acc:Q9P1Y5]
16.5572 -20.75 0.000053291 368 5 1 7 [+] picture button
HMHA1 ENSGACT00000017534 minor histocompatibility antigen HA-1 [Source:RefSeq_peptide;Acc:NP_036424]
16.8042 -23.96 0.0000537857 500 3 3 3 [+] picture button
LDB1 (2 of 2) ENSGACT00000009725 LIM domain-binding protein 1 (Carboxyl-terminal LIM domain-binding protein 2) (CLIM-2) (LIM domain-binding factor CLIM2). [Source:Uniprot/SWISSPROT;Acc:Q86U70]
17.9232 -20.78 0.0000553743 500 5 3 4 [+] picture button
AIFM3 ENSGACT00000012403 Apoptosis-inducing factor 3 (EC 1.-.-.-) (Apoptosis-inducing factor- like protein). [Source:Uniprot/SWISSPROT;Acc:Q96NN9]
15.7007 -19.7 0.0000558051 500 6 2 7 [+] picture button
MAP3K10 ENSGACT00000012929 Mitogen-activated protein kinase kinase kinase 10 (EC 2.7.11.25) (Mixed lineage kinase 2) (Protein kinase MST). [Source:Uniprot/SWISSPROT;Acc:Q02779]
16.3342 -21.64 0.0000568607 500 5 4 5 [+] picture button
ADM ENSGACT00000020746 ADM precursor [Contains: Adrenomedullin (AM); Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)]. [Source:Uniprot/SWISSPROT;Acc:P35318]
17.2829 -21.04 0.0000594294 275 7 6 14 [+] picture button
FAM108C1 ENSGACT00000018445 hypothetical protein LOC415479 [Source:RefSeq_peptide;Acc:NP_001007827]hypothetical protein LOC415479 [Source:RefSeq_peptide;Acc:NP_001007827] BY ORTHOLOGY TO:ENSGALT00000010361
17.9461 -31.23 0.0000597214 500 6 1 4 [+] picture button
MYO1F ENSGACT00000010158 Myosin-If (Myosin-Ie). [Source:Uniprot/SWISSPROT;Acc:O00160]
15.6124 -16.37 0.000064192 500 6 1 5 [+] picture button
CYGB (2 of 2) ENSGACT00000016856 Cytoglobin (Histoglobin) (HGb) (Stellate cell activation-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q8WWM9]
16.2772 -18.47 0.0000692849 419 7 3 10 [+] picture button
COQ4 ENSGACT00000022130 Ubiquinone biosynthesis protein COQ4 homolog (Coenzyme Q biosynthesis protein 4 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A0]
15.559 -20.32 0.0000705184 437 6 1 11 [+] picture button
PXK ENSGACT00000005200 PX domain-containing protein kinase-like protein (Modulator of Na,K- ATPase) (MONaKA). [Source:Uniprot/SWISSPROT;Acc:Q7Z7A4]
15.9739 -20.77 0.0000712119 500 3 1 6 [+] picture button
TAF6L ENSGACT00000001026 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65 alpha) (PAF65- alpha). [Source:Uniprot/SWISSPROT;Acc:Q9Y6J9]
17.5974 -24.72 0.0000712593 500 5 1 6 [+] picture button
PSL1_HUMAN ENSGACT00000022421 Signal peptide peptidase-like 2B (EC 3.4.23.-) (Protein SPP-like 2B) (Protein SPPL2b) (Intramembrane protease 4) (IMP4) (Presenilin-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TCT7]
16.5215 -25.82 0.00007546 500 3 1 4 [+] picture button
RANBP5 ENSGACT00000019588 Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5). [Source:Uniprot/SWISSPROT;Acc:O00410]
20.2234 -32.49 0.000075696 500 7 3 7 [+] picture button
SLC2A8 ENSGACT00000019454 Solute carrier family 2, facilitated glucose transporter member 8 (Glucose transporter type 8) (Glucose transporter type X1). [Source:Uniprot/SWISSPROT;Acc:Q9NY64]
16.487 -14.36 0.0000783097 285 4 2 5 [+] picture button
HDHD3 ENSGACT00000001916 haloacid dehalogenase-like hydrolase domain containing 3 [Source:RefSeq_peptide;Acc:NP_112496]
17.5582 -27.02 0.000080884 500 6 3 7 [+] picture button
NDOR1 ENSGACT00000024541 NADPH dependent diflavin oxidoreductase 1 [Source:RefSeq_peptide;Acc:NP_055249]
16.487 -18.35 0.0000821794 149 2 1 5 [+] picture button
RASL10A ENSGACT00000011352 Ras-like protein family 10 member A precursor (Ras-like protein RRP22) (RAS-related protein on chromosome 22). [Source:Uniprot/SWISSPROT;Acc:Q92737]
17.6237 -25.28 0.0000823256 500 7 3 8 [+] picture button
DIP2B (1 of 2) ENSGACT00000011169 DIP2 disco-interacting protein 2 homolog B [Source:RefSeq_peptide;Acc:NP_775873]
16.6928 -19.25 0.0000834072 500 4 4 5 [+] picture button
SARS2 ENSGACT00000007707 Seryl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.11) (Serine-- tRNA ligase) (SerRSmt). [Source:Uniprot/SWISSPROT;Acc:Q9NP81]
15.9494 -23.13 0.0000866208 314 7 2 7 [+] picture button
B3GAT3 ENSGACT00000026248 Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 (EC 2.4.1.135) (Beta-1,3-glucuronyltransferase 3) (Glucuronosyltransferase-I) (GlcAT-I) (UDP-GlcUA:Gal beta-1,3-Gal-R glucuronyltransferase) (GlcUAT-I). [Source:Uniprot/SWISSPROT;Acc:O94766]
16.9096 -16.34 0.0000867284 500 8 1 8 [+] picture button
ELOF1 ENSGACT00000008536 Transcription elongation factor 1 homolog. [Source:Uniprot/SWISSPROT;Acc:P60002]
15.7969 -23.87 0.0000908774 500 8 2 11 [+] picture button
LFNG ENSGACT00000018719 Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q8NES3]
15.6401 -15.07 0.000100102 500 7 1 13 [+] picture button
ENSGACT00000023816 NOT ANNOTATED
15.6915 -15.47 0.000100117 500 3 1 1 [+] picture button

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Download table: GFF TXT
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