spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-1

665 hits found.


Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
ENSGACT00000020354 NOT ANNOTATED
17.9651 -19.15 0.022879 58 2 1 3 [+] picture button
LGALS4 ENSGACT00000017124 Galectin-4 (Lactose-binding lectin 4) (L-36 lactose-binding protein) (L36LBP) (Antigen NY-CO-27). [Source:Uniprot/SWISSPROT;Acc:P56470]
20.1255 -18.99 0.0034026 74 2 1 4 [+] picture button
ENSGACT00000018568 NOT ANNOTATED
17.5103 -10.77 0.0339235 84 3 1 6 [+] picture button
MYOG ENSGACT00000000443 Myogenin (Myogenic factor 4) (Myf-4). [Source:Uniprot/SWISSPROT;Acc:P15173]
16.487 -15.32 0.00205543 86 2 2 3 [+] picture button
ASPM ENSGACT00000007826 Abnormal spindle-like microcephaly-associated protein (Abnormal spindle protein homolog) (Asp homolog). [Source:Uniprot/SWISSPROT;Acc:Q8IZT6]
17.8514 -13.71 0.0000175345 90 4 3 6 [+] picture button
PIGF ENSGACT00000003639 Phosphatidylinositol-glycan biosynthesis class F protein (PIG-F) (GPI11 homolog). [Source:Uniprot/SWISSPROT;Acc:Q07326]
16.6007 -12.95 0.00542907 94 3 1 7 [+] picture button
YIPF5 ENSGACT00000027451 Protein YIPF5 (YIP1 family member 5) (YPT-interacting protein 1 A) (Five-pass transmembrane protein localizing in the Golgi apparatus and the endoplasmic reticulum 5) (Smooth muscle cell-associated protein 5) (SMAP-5). [Source:Uniprot/SWISSPROT;Acc:Q969M3]
18.0788 -14.04 0.000000502903 97 1 2 2 [+] picture button
ENSGACT00000022081 NOT ANNOTATED
18.0788 -15.73 0.02072 97 1 1 2 [+] picture button
ENSGACT00000001633 NOT ANNOTATED
17.624 -16.61 0.0307558 100 3 1 6 [+] picture button
LGALS4 ENSGACT00000017118 Galectin-4 (Lactose-binding lectin 4) (L-36 lactose-binding protein) (L36LBP) (Antigen NY-CO-27). [Source:Uniprot/SWISSPROT;Acc:P56470]
20.1255 -18.99 0.0034026 105 3 1 5 [+] picture button
ENSGACT00000002018 NOT ANNOTATED
17.1692 -16.25 0.0454219 107 3 1 5 [+] picture button
ENSGACT00000021394 NOT ANNOTATED
18.761 -20.09 0.0113883 108 3 1 5 [+] picture button
GTF3C1 ENSGACT00000025847 General transcription factor 3C polypeptide 1 (Transcription factor IIIC-subunit alpha) (TF3C-alpha) (TFIIIC 220 kDa subunit) (TFIIIC220) (TFIIIC box B-binding subunit). [Source:Uniprot/SWISSPROT;Acc:Q12789]
16.3733 -13 0.00480023 111 2 1 3 [+] picture button
ENSGACT00000022893 Homolog of Gallus gallus "Equarin-L precursor. [Source:Uniprot/SPTREMBL;Acc:Q8AXP2]"Homolog of Gallus gallus "Equarin-L precursor. [Source:Uniprot/SPTREMBL;Acc:Q8AXP2]" BY ORTHOLOGY TO:SINFRUT00000143227
17.9651 -12.09 0.022879 113 1 1 2 [+] picture button
GMPS ENSGACT00000009364 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) (Glutamine amidotransferase) (GMP synthetase). [Source:Uniprot/SWISSPROT;Acc:P49915]
17.1692 -11.97 0.00390535 114 3 5 5 [+] picture button
ALAS1 (2 of 2) ENSGACT00000009301 5-aminolevulinate synthase, nonspecific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-H). [Source:Uniprot/SWISSPROT;Acc:P13196]
17.3966 -13.8 0.00346828 117 4 1 6 [+] picture button
LGALS4 ENSGACT00000017110 Galectin-4 (Lactose-binding lectin 4) (L-36 lactose-binding protein) (L36LBP) (Antigen NY-CO-27). [Source:Uniprot/SWISSPROT;Acc:P56470]
20.1255 -18.99 0.0034026 122 3 1 5 [+] picture button
ENSGACT00000011155 NOT ANNOTATED
17.5103 -10.84 0.0339235 123 2 1 5 [+] picture button
PDCL3 ENSGACT00000001071 Phosducin-like protein 3 (Viral IAP-associated factor 1) (VIAF-1) (HTPHLP). [Source:Uniprot/SWISSPROT;Acc:Q9H2J4]
17.1692 -14.27 0.0454219 125 2 1 3 [+] picture button
TMBIM4 ENSGACT00000025535 Transmembrane BAX inhibitor motif-containing protein 4 (Z-protein) (S1R protein). [Source:Uniprot/SWISSPROT;Acc:Q9HC24]
16.7144 -10.22 0.00839681 129 1 1 2 [+] picture button
ENSGACT00000016483 NOT ANNOTATED
17.3966 -11.82 0.0374048 135 4 1 6 [+] picture button
CPSF1 ENSGACT00000011619 Cleavage and polyadenylation specificity factor subunit 1 (Cleavage and polyadenylation specificity factor 160 kDa subunit) (CPSF 160 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q10570]
16.9418 -10.78 0.00303116 137 1 1 2 [+] picture button
ALAS1 (2 of 2) ENSGACT00000009306 5-aminolevulinate synthase, nonspecific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta-aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-H). [Source:Uniprot/SWISSPROT;Acc:P13196]
17.3966 -13.8 0.0374048 151 3 1 3 [+] picture button
ENSGACT00000001267 NOT ANNOTATED
17.3966 -16.21 0.0374048 153 1 1 2 [+] picture button
SF3A2 ENSGACT00000020165 Splicing factor 3A subunit 2 (Spliceosome-associated protein 62) (SAP 62) (SF3a66). [Source:Uniprot/SWISSPROT;Acc:Q15428]
17.1692 -13.34 0.0000225218 156 4 2 6 [+] picture button
ENSGACT00000022977 NOT ANNOTATED
17.2829 -16.03 0.0412275 156 2 1 3 [+] picture button
PTPN6 ENSGACT00000013387 Tyrosine-protein phosphatase non-receptor type 6 (EC 3.1.3.48) (Protein-tyrosine phosphatase 1C) (PTP-1C) (Hematopoietic cell protein-tyrosine phosphatase) (SH-PTP1) (Protein-tyrosine phosphatase SHP-1). [Source:Uniprot/SWISSPROT;Acc:P29350]
16.487 -13.49 0.0064503 160 3 1 4 [+] picture button
PEPD ENSGACT00000019320 Xaa-Pro dipeptidase (EC 3.4.13.9) (X-Pro dipeptidase) (Proline dipeptidase) (Prolidase) (Imidodipeptidase). [Source:Uniprot/SWISSPROT;Acc:P12955]
17.1692 -11.4 0.0000396576 165 3 3 6 [+] picture button
DBNDD2 (2 of 2) ENSGACT00000013189 Dysbindin domain-containing protein 2 (HSMNP1). [Source:Uniprot/SWISSPROT;Acc:Q9BQY9]
18.3062 -17.23 0.0169836 167 3 1 5 [+] picture button
ENSGACT00000021027 NOT ANNOTATED
18.6473 -16.57 0.0125875 169 2 1 4 [+] picture button
KLHL6 ENSGACT00000005034 Kelch-like protein 6. [Source:Uniprot/SWISSPROT;Acc:Q8WZ60]
16.487 -13.61 0.00432612 173 4 3 7 [+] picture button
ENSGACT00000007833 NOT ANNOTATED
17.7377 -16.53 0.0278751 173 3 1 4 [+] picture button
CLUAP1 ENSGACT00000011528 Clusterin-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96AJ1]
18.8747 -17.18 0.00000711274 174 4 2 5 [+] picture button
ENSGACT00000007825 NOT ANNOTATED
17.7377 -16.53 0.0278751 179 3 1 4 [+] picture button
ENSGACT00000013411 NOT ANNOTATED
18.5336 -13.53 0.0139113 179 3 1 4 [+] picture button
PDGFRL ENSGACT00000024635 Platelet-derived growth factor receptor-like protein precursor (PDGF receptor beta-like tumor suppressor). [Source:Uniprot/SWISSPROT;Acc:Q15198]
16.3733 -8.83 0.000683856 181 6 1 8 [+] picture button
PLEKHJ1 ENSGACT00000020151 pleckstrin homology domain containing, family J member 1 [Source:RefSeq_peptide;Acc:NP_060519]
16.9418 -14.72 0.00845286 181 4 2 9 [+] picture button
TMEM17 (2 of 2) ENSGACT00000014516 Transmembrane protein 17. [Source:Uniprot/SWISSPROT;Acc:Q86X19]
17.5103 -14.52 0.00154419 183 5 1 9 [+] picture button
WAS ENSGACT00000016239 Wiskott-Aldrich syndrome protein (WASp). [Source:Uniprot/SWISSPROT;Acc:P42768]
18.0788 -18.32 0.000145707 188 4 2 7 [+] picture button
PBRM1 (1 of 2) ENSGACT00000001273 Protein polybromo-1 (hPB1) (Polybromo-1D) (BRG1-associated factor 180) (BAF180). [Source:Uniprot/SWISSPROT;Acc:Q86U86]
18.4199 -13.4 0.0153721 189 4 1 8 [+] picture button
DPP7 ENSGACT00000004364 Dipeptidyl-peptidase 2 precursor (EC 3.4.14.2) (Dipeptidyl-peptidase II) (DPP II) (Dipeptidyl aminopeptidase II) (Quiescent cell proline dipeptidase) (Dipeptidyl peptidase 7). [Source:Uniprot/SWISSPROT;Acc:Q9UHL4]
17.0555 -16.49 0.00250201 195 5 2 9 [+] picture button
NEIL3 ENSGACT00000021892 Endonuclease VIII-like 3 (Nei-like 3) (DNA glycosylase FPG2). [Source:Uniprot/SWISSPROT;Acc:Q8TAT5]
17.1692 -12.24 0.00479138 195 3 2 7 [+] picture button
LZIC ENSGACT00000009650 Protein LZIC (Leucine zipper and ICAT homologous domain-containing protein) (Leucine zipper and CTNNBIP1 domain-containing protein). [Source:Uniprot/SWISSPROT;Acc:Q8WZA0]
18.1925 -14.66 0.0187609 203 5 1 6 [+] picture button
ENSGACT00000000583 NOT ANNOTATED
17.2829 -9.84 0.00400031 209 3 1 4 [+] picture button
LZIC ENSGACT00000009681 Protein LZIC (Leucine zipper and ICAT homologous domain-containing protein) (Leucine zipper and CTNNBIP1 domain-containing protein). [Source:Uniprot/SWISSPROT;Acc:Q8WZA0]
18.761 -17.74 0.0113883 209 5 1 6 [+] picture button
BDH1 ENSGACT00000004747 D-beta-hydroxybutyrate dehydrogenase, mitochondrial precursor (EC 1.1.1.30) (BDH) (3-hydroxybutyrate dehydrogenase). [Source:Uniprot/SWISSPROT;Acc:Q02338]
16.487 -12.46 0.0064503 213 5 1 8 [+] picture button
RSAD1 ENSGACT00000014073 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial precursor (EC 1.3.99.-) (Oxygen-independent coproporphyrinogen III oxidase-like protein RSAD1). [Source:Uniprot/SWISSPROT;Acc:Q9HA92]
18.0788 -17.46 0.02072 215 4 1 6 [+] picture button
ENSGACT00000001885 NOT ANNOTATED
17.624 -13.52 0.0307558 215 4 1 7 [+] picture button
RBM28 ENSGACT00000016724 RNA-binding protein 28 (RNA-binding motif protein 28). [Source:Uniprot/SWISSPROT;Acc:Q9NW13]
17.0555 -14.54 0.00250201 218 7 2 12 [+] picture button
PERP ENSGACT00000014017 p53 apoptosis effector related to PMP-22 (Keratinocytes-associated protein 1) (KCP-1) (P53-induced protein PIGPC1) (Transmembrane protein THW). [Source:Uniprot/SWISSPROT;Acc:Q96FX8]
19.7844 -20.22 0.00460599 219 3 2 7 [+] picture button

Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Download table: GFF TXT
spacer
spacer