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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-196b

788 hits found.


Page 1 of 16
1 2 3 4 5 6 7 8 9 10 11 .. 16 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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MYC ENSGACT00000005889 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.1116 -13.77 0.0000000204235 500 9 13 15 [+] picture button
RNF20 ENSGACT00000023800 E3 ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (hBRE1) (RING finger protein 20). [Source:Uniprot/SWISSPROT;Acc:Q5VTR2]
16.2839 -16.36 0.0000000952302 500 5 1 6 [+] picture button
RAD50 ENSGACT00000027444 DNA repair protein RAD50 (EC 3.6.-.-) (hRAD50). [Source:Uniprot/SWISSPROT;Acc:Q92878]
16.1192 -12.32 0.000000571122 500 7 1 9 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
16.0003 -16.72 0.000001 500 11 1 3 [+] picture button
ENSGACT00000014186 Homolog of Homo sapiens "DAB2 interacting protein [Source:RefSeq_peptide;Acc:NP_619723]"Homolog of Homo sapiens "DAB2 interacting protein [Source:RefSeq_peptide;Acc:NP_619723]" BY ORTHOLOGY TO:SINFRUT00000147804
16.764 -16.22 0.000001 500 6 1 3 [+] picture button
NP_068761.4 ENSGACT00000025448 CDNA: FLJ23339 fis, clone HEP13401. [Source:Uniprot/SPTREMBL;Acc:Q9H5K9]
16.0322 -18.56 0.00000306606 272 8 1 10 [+] picture button
AVIL ENSGACT00000000681 Advillin (p92). [Source:Uniprot/SWISSPROT;Acc:O75366]
15.7969 -20.88 0.00000424547 500 6 1 6 [+] picture button
YEATS4 ENSGACT00000026066 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]
16.2656 -15.8 0.00000591832 500 8 2 13 [+] picture button
BEST1 ENSGACT00000007425 Bestrophin-1 (Vitelliform macular dystrophy protein 2) (TU15B). [Source:Uniprot/SWISSPROT;Acc:O76090]
16.1835 -16.88 0.00000676485 500 5 3 8 [+] picture button
NP_078836.1 ENSGACT00000026480 CDNA: FLJ21963 fis, clone HEP05583 (FLJ21963 protein). [Source:Uniprot/SPTREMBL;Acc:Q9H6R3]
16.8281 -12.35 0.00000994418 231 3 1 4 [+] picture button
NME5 ENSGACT00000023979 Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-H5) (Testis-specific nm23 homolog) (Inhibitor of p53-induced apoptosis-beta) (IPIA-beta). [Source:Uniprot/SWISSPROT;Acc:P56597]
15.7969 -13.27 0.0000107585 500 5 1 6 [+] picture button
ODZ1 ENSGACT00000024554 Teneurin-1 (Ten-1) (Tenascin-M1) (Ten-m1) (Protein Odd Oz/ten-m homolog 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKZ4]
15.8108 -20.75 0.0000109096 500 6 6 9 [+] picture button
VSNL1 (1 of 2) ENSGACT00000006351 Visinin-like protein 1 (VILIP) (Hippocalcin-like protein 3) (HLP3). [Source:Uniprot/SWISSPROT;Acc:P62760]
16.5782 -16.65 0.0000121726 500 3 9 5 [+] picture button
COL1A2 ENSGACT00000008691 Collagen alpha-2(I) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P08123]
16.7144 -14.53 0.0000124962 253 4 7 10 [+] picture button
TNNC1 ENSGACT00000020021 Troponin C, slow skeletal and cardiac muscles (TN-C). [Source:Uniprot/SWISSPROT;Acc:P63316]
16.7179 -13.79 0.000014058 513 4 3 7 [+] picture button
POLR3D ENSGACT00000014750 DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4) (RPC53) (Protein BN51). [Source:Uniprot/SWISSPROT;Acc:P05423]
16.3623 -18.39 0.0000170184 341 5 2 9 [+] picture button
CLEC3A ENSGACT00000020805 C-type lectin domain family 3 member A precursor (C-type lectin superfamily member 1) (Cartilage-derived C-type lectin). [Source:Uniprot/SWISSPROT;Acc:O75596]
17.1939 -16.43 0.0000173394 500 5 1 6 [+] picture button
ACTN2 ENSGACT00000013535 Alpha-actinin-2 (Alpha actinin skeletal muscle isoform 2) (F-actin cross-linking protein). [Source:Uniprot/SWISSPROT;Acc:P35609]
16.6565 -17.42 0.0000177115 500 4 4 4 [+] picture button
ZFPM1 ENSGACT00000003357 Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1). [Source:Uniprot/SWISSPROT;Acc:Q8IX07]
17.1236 -21.77 0.0000269095 500 7 3 8 [+] picture button
HOXA5 ENSGACT00000009434 Homeobox protein Hox-A5 (Hox-1C). [Source:Uniprot/SWISSPROT;Acc:P20719]
17.0847 -22.7 0.0000343481 500 5 6 7 [+] picture button
FAM19A2 ENSGACT00000025331 Protein FAM19A2 precursor (Chemokine-like protein TAFA-2). [Source:Uniprot/SWISSPROT;Acc:Q8N3H0]
17.8386 -20.6 0.0000347025 500 4 3 9 [+] picture button
ADCK1 ENSGACT00000026654 Uncharacterized aarF domain-containing protein kinase 1 precursor (EC 2.7.-.-). [Source:Uniprot/SWISSPROT;Acc:Q86TW2]
15.9902 -25.65 0.0000382529 307 5 1 7 [+] picture button
KIAA2022 ENSGACT00000024163 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
18.4834 -18.39 0.0000433356 500 6 7 9 [+] picture button
NP_001014985.1 (1 of 2) ENSGACT00000027006 RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527]RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527] BY ORTHOLOGY TO:ENSMUST00000057685
16.4416 -18.4 0.0000462565 500 7 2 7 [+] picture button
C9orf75 ENSGACT00000023905 CDNA FLJ90254 fis, clone NT2RM4000295. [Source:Uniprot/SPTREMBL;Acc:Q8NCH2]
16.1757 -21.68 0.0000609487 500 4 1 6 [+] picture button
FRMD3 ENSGACT00000010017 FERM domain containing 3 [Source:RefSeq_peptide;Acc:NP_777598]
16.8417 -18.41 0.0000623237 500 3 1 5 [+] picture button
PLLP ENSGACT00000018406 Plasmolipin (Plasma membrane proteolipid). [Source:Uniprot/SWISSPROT;Acc:Q9Y342]
16.0118 -12.09 0.0000725773 500 4 1 5 [+] picture button
KIAA1279 ENSGACT00000021239 Uncharacterized protein KIAA1279. [Source:Uniprot/SWISSPROT;Acc:Q96EK5]
15.7944 -15.02 0.000073694 500 7 3 15 [+] picture button
BIRC6 ENSGACT00000002908 Baculoviral IAP repeat-containing protein 6 (Ubiquitin-conjugating BIR domain enzyme apollon). [Source:Uniprot/SWISSPROT;Acc:Q9NR09]
16.9267 -16.46 0.0000754889 500 4 9 5 [+] picture button
DUSP12 ENSGACT00000019650 Dual specificity protein phosphatase 12 (EC 3.1.3.48) (EC 3.1.3.16) (Dual specificity tyrosine phosphatase YVH1). [Source:Uniprot/SWISSPROT;Acc:Q9UNI6]
16.0322 -17.53 0.0000762349 205 6 3 10 [+] picture button
ENSGACT00000011403 SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740]SAR1a gene homolog 1 [Source:RefSeq_peptide;Acc:NP_001007740] BY ORTHOLOGY TO:ENSRNOT00000000673
15.9185 -17.46 0.00009376 174 4 1 5 [+] picture button
AUH ENSGACT00000024714 Methylglutaconyl-CoA hydratase, mitochondrial precursor (EC 4.2.1.18) (AU-specific RNA-binding enoyl-CoA hydratase) (AU-binding protein/enoyl-CoA hydratase). [Source:Uniprot/SWISSPROT;Acc:Q13825]
16.3499 -16.81 0.0000970942 388 8 2 12 [+] picture button
LRP1 (2 of 2) ENSGACT00000012316 Low-density lipoprotein receptor-related protein 1 precursor (LRP) (Alpha-2-macroglobulin receptor) (A2MR) (Apolipoprotein E receptor) (APOER) (CD91 antigen). [Source:Uniprot/SWISSPROT;Acc:Q07954]
16.5053 -13.42 0.000104816 500 9 7 13 [+] picture button
SRP68 ENSGACT00000025505 Signal recognition particle 68 kDa protein (SRP68). [Source:Uniprot/SWISSPROT;Acc:Q9UHB9]
16.6257 -10.91 0.000106747 500 5 1 6 [+] picture button
ENSGACT00000008730 Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543]Friend leukemia integration 1 transcription factor (Fli-1 proto- oncogene) (ERGB transcription factor). [Source:Uniprot/SWISSPROT;Acc:Q01543] BY ORTHOLOGY TO:ENSXETT00000049289
16.2584 -17.46 0.000112042 500 7 4 7 [+] picture button
NP_443413.1 ENSGACT00000027727 cytochrome c oxidase subunit I [Source:RefSeq_peptide;Acc:NP_443413]
16.764 -16.16 0.000116589 500 2 3 5 [+] picture button
EPHA8 ENSGACT00000014569 Ephrin type-A receptor 8 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EEK) (EPH- and ELK-related kinase) (HEK3). [Source:Uniprot/SWISSPROT;Acc:P29322]
15.8809 -12.36 0.000117586 500 5 3 5 [+] picture button
ASB3 ENSGACT00000018960 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
15.9043 -19.83 0.000119901 500 2 2 3 [+] picture button
IGFBP6 (2 of 2) ENSGACT00000014167 Insulin-like growth factor-binding protein 6 precursor (IGFBP-6) (IBP- 6) (IGF-binding protein 6). [Source:Uniprot/SWISSPROT;Acc:P24592]
16.6117 -19.29 0.000133573 500 9 3 13 [+] picture button
MRPS33 ENSGACT00000015125 Mitochondrial 28S ribosomal protein S33 (S33mt) (MRP-S33). [Source:Uniprot/SWISSPROT;Acc:Q9Y291]
16.6007 -18.34 0.000134979 244 3 1 6 [+] picture button
ENSGACT00000002853 SPS1/STE20-related protein kinase YSK4 (EC 2.7.11.1) (Regulated in COPD, protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q56UN5]SPS1/STE20-related protein kinase YSK4 (EC 2.7.11.1) (Regulated in COPD, protein kinase). [Source:Uniprot/SWISSPROT;Acc:Q56UN5] BY ORTHOLOGY TO:ENSXETT00000001086
16.6565 -15.92 0.000143323 500 7 1 8 [+] picture button
SCG3 ENSGACT00000019801 Secretogranin-3 precursor (Secretogranin III) (SgIII). [Source:Uniprot/SWISSPROT;Acc:Q8WXD2]
16.3962 -14.34 0.000149129 696 2 1 2 [+] picture button
LRRC4 (2 of 2) ENSGACT00000026209 Leucine-rich repeat-containing protein 4 precursor (Brain tumor- associated protein BAG). [Source:Uniprot/SWISSPROT;Acc:Q9HBW1]
17.7581 -20.3 0.00014941 500 8 4 8 [+] picture button
LYAR_HUMAN ENSGACT00000012127 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q9NX58]
16.0118 -14.83 0.000149843 500 7 3 9 [+] picture button
ENSGACT00000001964 hypothetical protein LOC393668 [Source:RefSeq_peptide;Acc:NP_956989]hypothetical protein LOC393668 [Source:RefSeq_peptide;Acc:NP_956989] BY ORTHOLOGY TO:ENSDART00000103842
16.3733 -16.52 0.000159226 214 5 1 11 [+] picture button
STRBP ENSGACT00000023015 Spermatid perinuclear RNA-binding protein. [Source:Uniprot/SWISSPROT;Acc:Q96SI9]
16.5212 -17.02 0.000169 500 6 2 8 [+] picture button
RDH5 ENSGACT00000007766 11-cis retinol dehydrogenase (EC 1.1.1.105) (11-cis RDH). [Source:Uniprot/SWISSPROT;Acc:Q92781]
15.8047 -10.25 0.000194031 308 8 2 14 [+] picture button
TAGLN (1 of 2) ENSGACT00000007964 Transgelin (Smooth muscle protein 22-alpha) (SM22-alpha) (WS3-10) (22 kDa actin-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q01995]
16.9789 -20.18 0.000208799 500 5 1 8 [+] picture button
VKORC1 ENSGACT00000010358 Vitamin K epoxide reductase complex subunit 1 (EC 1.1.4.1) (Vitamin K1 2,3-epoxide reductase subunit 1). [Source:Uniprot/SWISSPROT;Acc:Q9BQB6]
16.9382 -15.19 0.000249293 500 5 1 7 [+] picture button
ZBTB47 ENSGACT00000004427 zinc finger and BTB domain containing 47 (ZBTB47), mRNA [Source:RefSeq_dna;Acc:NM_145166]
16.7953 -19.92 0.000323042 500 6 2 12 [+] picture button

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Download table: GFF TXT
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