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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-193

858 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NP_203751.2 ENSGACT00000022255 Homolog of Gallus gallus "Diaphanous homologue. [Source:Uniprot/SPTREMBL;Acc:Q9DEH3]"Homolog of Gallus gallus "Diaphanous homologue. [Source:Uniprot/SPTREMBL;Acc:Q9DEH3]" BY ORTHOLOGY TO:SINFRUT00000163996
15.0774 -12.25 0.0000000109988 500 3 2 5 [+] picture button
NP_001074294.1 ENSGACT00000022515 Hypothetical LOC496438. [Source:Uniprot/SPTREMBL;Acc:Q63ZG0]Hypothetical LOC496438. [Source:Uniprot/SPTREMBL;Acc:Q63ZG0] BY ORTHOLOGY TO:ENSXETT00000008133
16.1717 -13.08 0.0000000823291 500 5 4 8 [+] picture button
ARPC4 ENSGACT00000000108 Tubulin--tyrosine ligase-like protein 3 (HOTTL). [Source:Uniprot/SWISSPROT;Acc:Q9Y4R7]
15.6366 -16.83 0.000000591453 500 3 8 3 [+] picture button
UBP1 ENSGACT00000007351 Upstream-binding protein 1 (LBP-1). [Source:Uniprot/SWISSPROT;Acc:Q9NZI7]
15.5819 -14.87 0.000000638546 500 4 3 6 [+] picture button
ENSGACT00000000204 NOT ANNOTATED
14.7222 -13.97 0.000001 500 8 1 5 [+] picture button
PTPN21 ENSGACT00000013972 Tyrosine-protein phosphatase non-receptor type 21 (EC 3.1.3.48) (Protein-tyrosine phosphatase D1). [Source:Uniprot/SWISSPROT;Acc:Q16825]
16.7075 -19.43 0.00000221518 500 5 2 9 [+] picture button
FGFR3 ENSGACT00000006002 Fibroblast growth factor receptor 3 precursor (EC 2.7.10.1) (FGFR-3) (CD333 antigen). [Source:Uniprot/SWISSPROT;Acc:P22607]
16.3277 -18.61 0.00000300551 500 5 5 6 [+] picture button
PPP2R5C (1 of 2) ENSGACT00000017097 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform (PP2A, B subunit, B' gamma isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma isoform) (Renal carcinoma antigen NY- [Source:Uniprot/SWISSPROT;Acc:Q13362]
15.9185 -11.66 0.00000437473 500 2 1 2 [+] picture button
ODC1 ENSGACT00000017217 Ornithine decarboxylase (EC 4.1.1.17) (ODC). [Source:Uniprot/SWISSPROT;Acc:P11926]
16.6714 -15.04 0.00000563533 500 5 2 4 [+] picture button
ECSIT ENSGACT00000001038 evolutionarily conserved signaling intermediate in Toll pathway [Source:RefSeq_peptide;Acc:NP_057665]
14.8297 -14.42 0.00000762751 500 8 1 10 [+] picture button
INHA ENSGACT00000018909 Inhibin alpha chain precursor. [Source:Uniprot/SWISSPROT;Acc:P05111]
17.161 -21.38 0.00000777551 500 7 1 8 [+] picture button
SBK1 ENSGACT00000011250 Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q52WX2]
15.6894 -19.2 0.0000162945 500 8 4 10 [+] picture button
PAF1 ENSGACT00000014354 Paf1, RNA polymerase II associated factor, homolog [Source:RefSeq_peptide;Acc:NP_061961]
15.5819 -14.41 0.0000179105 500 5 1 6 [+] picture button
LARGE ENSGACT00000025458 Glycosyltransferase-like protein LARGE1 (EC 2.4.-.-) (Acetylglucosaminyltransferase-like 1A). [Source:Uniprot/SWISSPROT;Acc:O95461]
16.9789 -19.46 0.0000199204 500 7 3 10 [+] picture button
RAVER1 ENSGACT00000018285 Ribonucleoprotein PTB-binding 1 (Protein raver-1). [Source:Uniprot/SWISSPROT;Acc:Q8IY67]
16.3342 -18.75 0.000020721 500 6 2 9 [+] picture button
SLC35E1 ENSGACT00000011219 Solute carrier family 35 member E1. [Source:Uniprot/SWISSPROT;Acc:Q96K37]
15.691 -19.34 0.000025314 500 8 1 11 [+] picture button
CHST10 ENSGACT00000020053 Carbohydrate sulfotransferase 10 (EC 2.8.2.-) (HNK-1 sulfotransferase) (HNK1ST) (HNK-1ST) (huHNK-1ST). [Source:Uniprot/SWISSPROT;Acc:O43529]
14.862 -22.25 0.0000271404 500 6 2 13 [+] picture button
PTGS1 (1 of 2) ENSGACT00000018433 Prostaglandin G/H synthase 1 precursor (EC 1.14.99.1) (Cyclooxygenase- 1) (COX-1) (Prostaglandin-endoperoxide synthase 1) (Prostaglandin H2 synthase 1) (PGH synthase 1) (PGHS-1) (PHS 1). [Source:Uniprot/SWISSPROT;Acc:P23219]
16.2549 -21.21 0.0000313615 500 8 1 7 [+] picture button
CACNA1B ENSGACT00000023918 Voltage-dependent N-type calcium channel subunit alpha-1B (Voltage- gated calcium channel subunit alpha Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII). [Source:Uniprot/SWISSPROT;Acc:Q00975]
15.2595 -11.63 0.0000320481 500 6 3 6 [+] picture button
ASB1 ENSGACT00000002896 Ankyrin repeat and SOCS box protein 1 (ASB-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y576]
15.2707 -19.01 0.0000350217 314 6 3 8 [+] picture button
EEF1E1 ENSGACT00000003035 Eukaryotic translation elongation factor 1 epsilon-1 (Multisynthetase complex auxiliary component p18) (Elongation factor p18). [Source:Uniprot/SWISSPROT;Acc:O43324]
15.4347 -21.4 0.0000358156 500 9 1 17 [+] picture button
GPR20 ENSGACT00000011831 Probable G-protein coupled receptor 20. [Source:Uniprot/SWISSPROT;Acc:Q99678]
15.2595 -21.46 0.0000385295 500 5 2 8 [+] picture button
SLC19A1 ENSGACT00000019165 Folate transporter 1 (Solute carrier family 19 member 1) (Placental folate transporter) (FOLT) (Reduced folate carrier protein) (RFC) (Intestinal folate carrier) (IFC-1). [Source:Uniprot/SWISSPROT;Acc:P41440]
15.1075 -15.03 0.0000483489 500 4 1 4 [+] picture button
RPA1 (1 of 2) ENSGACT00000014402 Replication protein A 70 kDa DNA-binding subunit (RP-A) (RF-A) (Replication factor-A protein 1) (Single-stranded DNA-binding protein) (p70). [Source:Uniprot/SWISSPROT;Acc:P27694]
14.9034 -15.75 0.0000564323 592 3 1 4 [+] picture button
KCNC2 ENSGACT00000025753 Shaw-related voltage-gated potassium channel protein 2 isoform KV3.2c [Source:RefSeq_peptide;Acc:NP_715624]
15.367 -16.86 0.0000611805 500 2 1 6 [+] picture button
CLIP2 ENSGACT00000027609 CAP-Gly domain-containing linker protein 2 (Cytoplasmic linker protein 2) (Cytoplasmic linker protein 115) (CLIP-115) (Williams-Beuren syndrome chromosome region 4 protein). [Source:Uniprot/SWISSPROT;Acc:Q9UDT6]
14.8835 -15.2 0.0000640712 553 1 1 1 [+] picture button
DOT1L ENSGACT00000016719 Histone-lysine N-methyltransferase, H3 lysine-79 specific (EC 2.1.1.43) (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8TEK3]
15.0446 -15.19 0.0000673675 500 3 2 3 [+] picture button
QPCTL ENSGACT00000012863 glutaminyl-peptide cyclotransferase-like [Source:RefSeq_peptide;Acc:NP_060129]
15.9185 -16.82 0.0000730417 237 5 2 8 [+] picture button
TRAFD1 ENSGACT00000011055 TRAF-type zinc finger domain-containing protein 1 (Protein FLN29). [Source:Uniprot/SWISSPROT;Acc:O14545]
17.1284 -17.06 0.0000738672 500 8 1 11 [+] picture button
SGCD ENSGACT00000027572 Delta-sarcoglycan (SG-delta) (35 kDa dystrophin-associated glycoprotein) (35DAG). [Source:Uniprot/SWISSPROT;Acc:Q92629]
16.2228 -16.21 0.0000767526 443 4 1 6 [+] picture button
MKNK1 ENSGACT00000015751 MAP kinase-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (MAP kinase signal-integrating kinase 1) (Mnk1). [Source:Uniprot/SWISSPROT;Acc:Q9BUB5]
15.1143 -13.87 0.0000817277 500 8 4 13 [+] picture button
MADD ENSGACT00000022711 MAP kinase-activating death domain protein (Differentially expressed in normal and neoplastic cells) (Insulinoma-glucagonoma clone 20) (Rab3 GDP/GTP exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q8WXG6]
15.2605 -16.12 0.0000841694 500 4 1 5 [+] picture button
IER5L (1 of 2) ENSGACT00000024552 immediate early response 5-like protein [Source:RefSeq_peptide;Acc:NP_982258]
16.8303 -23.18 0.0000858764 500 5 1 4 [+] picture button
NFIA ENSGACT00000004145 Nuclear factor 1 A-type (Nuclear factor 1/A) (NF1-A) (NFI-A) (NF-I/A) (CCAAT-box-binding transcription factor) (CTF) (TGGCA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q12857]
16.2088 -20.83 0.0000947449 500 8 1 11 [+] picture button
FGFRL1 (2 of 2) ENSGACT00000010976 Fibroblast growth factor receptor-like 1 precursor (FGF receptor-like protein 1) (Fibroblast growth factor receptor 5) (FGFR-like protein) (FGF homologous factor receptor). [Source:Uniprot/SWISSPROT;Acc:Q8N441]
15.084 -11.78 0.000098001 500 3 4 3 [+] picture button
PFKFB2 (2 of 2) ENSGACT00000004254 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 (6PF-2-K/Fru- 2,6-P2ASE heart-type isozyme) (PFK-2/FBPase-2) [Includes: 6- phosphofructo-2-kinase (EC 2.7.1.105); Fructose-2,6-bisphosphatase (EC 3.1.3.46)]. [Source:Uniprot/SWISSPROT;Acc:O60825]
16.4883 -16.37 0.000101027 500 6 1 8 [+] picture button
SETD1B ENSGACT00000022498 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
15.4418 -15.75 0.000105012 500 6 5 9 [+] picture button
NP_001003808.1 ENSGACT00000007233 NOT ANNOTATED
14.8951 -18.09 0.000113688 126 3 3 4 [+] picture button
C19orf47 ENSGACT00000012941 Uncharacterized protein C19orf47. [Source:Uniprot/SPTREMBL;Acc:Q8N9M1]
14.8554 -15.27 0.000117498 500 6 1 8 [+] picture button
SMEK1 ENSGACT00000012211 SMEK homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q6IN85]
16.8226 -16.38 0.000122567 500 11 4 10 [+] picture button
TRPC4AP ENSGACT00000013416 Trpc4-associated protein (Short transient receptor potential channel 4-associated protein) (Trp4-associated protein) (TAP1 protein) (TNF- receptor ubiquitous scaffolding/signaling protein) (Protein TRUSS). [Source:Uniprot/SWISSPROT;Acc:Q8TEL6]
15.4607 -26.84 0.000123532 358 6 4 8 [+] picture button
FXC1 ENSGACT00000027284 Mitochondrial import inner membrane translocase subunit Tim9 B (TIMM10B) (Tim10b) (Fracture callus protein 1) (FxC1). [Source:Uniprot/SWISSPROT;Acc:Q9Y5J6]
15.5819 -14.52 0.000133691 500 4 1 3 [+] picture button
LMOD3 ENSGACT00000004509 Leiomodin-3 (Leiomodin, fetal form). [Source:Uniprot/SWISSPROT;Acc:Q0VAK6]
15.1817 -12.67 0.000171305 500 3 2 3 [+] picture button
SARS ENSGACT00000005373 Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS). [Source:Uniprot/SWISSPROT;Acc:P49591]
15.2317 -16.24 0.000207886 446 2 1 2 [+] picture button
ITGA7 ENSGACT00000009279 Integrin alpha-7 precursor [Contains: Integrin alpha-7 heavy chain; Integrin alpha-7 light chain]. [Source:Uniprot/SWISSPROT;Acc:Q13683]
15.367 -14.67 0.000209593 500 6 1 10 [+] picture button
E2F1 ENSGACT00000006250 Transcription factor E2F1 (E2F-1) (Retinoblastoma-binding protein 3) (RBBP-3) (PRB-binding protein E2F-1) (PBR3) (Retinoblastoma-associated protein 1) (RBAP-1). [Source:Uniprot/SWISSPROT;Acc:Q01094]
15.9043 -24.3 0.000216424 500 2 3 2 [+] picture button
POLK ENSGACT00000013258 DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP). [Source:Uniprot/SWISSPROT;Acc:Q9UBT6]
15.1884 -18 0.000232168 497 6 1 14 [+] picture button
ENSGACT00000001787 Homolog of Brachydanio rerio "Bloody fingers. [Source:Uniprot/SPTREMBL;Acc:Q5J2I5]"Homolog of Brachydanio rerio "Bloody fingers. [Source:Uniprot/SPTREMBL;Acc:Q5J2I5]" BY ORTHOLOGY TO:SINFRUT00000161396
16.8885 -16.87 0.000238107 440 5 1 6 [+] picture button
HMCN1 ENSGACT00000009770 Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7]
15.609 -16.02 0.00024866 500 3 1 6 [+] picture button
GUCA1B ENSGACT00000004438 Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B). [Source:Uniprot/SWISSPROT;Acc:Q9UMX6]
15.1521 -19.54 0.000254647 500 6 1 8 [+] picture button

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Download table: GFF TXT
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