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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-187

781 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SRP19 ENSGACT00000001414 Signal recognition particle 19 kDa protein (SRP19). [Source:Uniprot/SWISSPROT;Acc:P09132]
16.3227 -14.19 0.000000559198 177 2 1 2 [+] picture button
ENSGACT00000018756 NOT ANNOTATED
16.0929 -20.12 0.000001 170 5 1 1 [+] picture button
BHLHB2 (2 of 2) ENSGACT00000000850 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
18.5254 -26.97 0.00000165688 500 10 4 14 [+] picture button
GPR146 ENSGACT00000018520 Probable G-protein coupled receptor 146 (G-protein coupled receptor PGR8). [Source:Uniprot/SWISSPROT;Acc:Q96CH1]
18.6395 -22.36 0.00000933725 500 5 3 7 [+] picture button
NP_001041714.1 ENSGACT00000009443 RIKEN cDNA 2810008M24 gene [Source:MarkerSymbol;Acc:MGI:1922866]RIKEN cDNA 2810008M24 gene [Source:MarkerSymbol;Acc:MGI:1922866] BY ORTHOLOGY TO:ENSRNOT00000047282
17.2613 -18.18 0.000033296 562 5 1 7 [+] picture button
R3HDM2 ENSGACT00000008545 R3H domain-containing protein 2 (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9Y2K5]
16.3322 -20.38 0.0000344953 500 4 4 4 [+] picture button
SEC22C ENSGACT00000004414 SEC22 vesicle trafficking protein homolog C isoform b [Source:RefSeq_peptide;Acc:NP_004197]
16.8289 -25.13 0.000036987 500 6 2 10 [+] picture button
CRMP1 ENSGACT00000021214 Dihydropyrimidinase-related protein 1 (DRP-1) (Collapsin response mediator protein 1) (CRMP-1). [Source:Uniprot/SWISSPROT;Acc:Q14194]
17.2598 -23.6 0.0000446181 500 5 1 5 [+] picture button
NRAP ENSGACT00000008665 Nebulin-related-anchoring protein (N-RAP). [Source:Uniprot/SWISSPROT;Acc:Q86VF7]
16.6118 -16.91 0.0000583314 500 5 1 6 [+] picture button
JAK2 (1 of 2) ENSGACT00000018148 Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase 2) (JAK-2). [Source:Uniprot/SWISSPROT;Acc:O60674]
16.0929 -17.89 0.0000740755 500 4 1 4 [+] picture button
TGFB1 ENSGACT00000016962 Transforming growth factor beta-1 precursor (TGF-beta-1) [Contains: Latency-associated peptide (LAP)]. [Source:Uniprot/SWISSPROT;Acc:P01137]
15.9296 -17.16 0.0000803044 500 5 2 5 [+] picture button
TIAL1 ENSGACT00000004428 Nucleolysin TIAR (TIA-1-related protein). [Source:Uniprot/SWISSPROT;Acc:Q01085]
16.2059 -21.55 0.0000984552 500 6 1 5 [+] picture button
DKK4 ENSGACT00000000458 Dickkopf-related protein 4 precursor (Dkk-4) (Dickkopf-4) (hDkk-4) [Contains: Dickkopf-related protein 4 short form]. [Source:Uniprot/SWISSPROT;Acc:Q9UBT3]
16.0683 -13.18 0.000101297 500 2 2 2 [+] picture button
KIFC3 ENSGACT00000023277 Kinesin-like protein KIFC3. [Source:Uniprot/SWISSPROT;Acc:Q9BVG8]
18.0548 -25.31 0.000101528 500 3 1 2 [+] picture button
DRD5 (2 of 2) ENSGACT00000021409 D(1B) dopamine receptor (D(5) dopamine receptor) (D1beta dopamine receptor). [Source:Uniprot/SWISSPROT;Acc:P21918]
17.0461 -27.26 0.000118823 500 6 1 5 [+] picture button
SEMA3F (2 of 2) ENSGACT00000015895 Semaphorin-3F precursor (Semaphorin IV) (Sema IV) (Sema III/F). [Source:Uniprot/SWISSPROT;Acc:Q13275]
15.9971 -22.55 0.000121714 500 7 3 11 [+] picture button
DEF6 ENSGACT00000011050 differentially expressed in FDCP 6 homolog [Source:RefSeq_peptide;Acc:NP_071330]
16.4796 -20.17 0.000123281 572 5 3 5 [+] picture button
CTDP1 ENSGACT00000011481 RNA polymerase II subunit A C-terminal domain phosphatase (EC 3.1.3.16) (TFIIF-associating CTD phosphatase). [Source:Uniprot/SWISSPROT;Acc:Q9Y5B0]
16.6006 -21.99 0.000127209 500 4 1 7 [+] picture button
ATP8B2 ENSGACT00000016127 Probable phospholipid-transporting ATPase ID (EC 3.6.3.1) (ATPase class I type 8B member 2). [Source:Uniprot/SWISSPROT;Acc:P98198]
18.3489 -27.99 0.000136473 500 3 2 3 [+] picture button
NP_940961.1 ENSGACT00000017006 hypothetical protein LOC767803 [Source:RefSeq_peptide;Acc:NP_001070238]hypothetical protein LOC767803 [Source:RefSeq_peptide;Acc:NP_001070238] BY ORTHOLOGY TO:ENSDART00000091700
16.7203 -16.17 0.000138315 500 4 2 5 [+] picture button
SOX4 (2 of 2) ENSGACT00000011968 Transcription factor SOX-4. [Source:Uniprot/SWISSPROT;Acc:Q06945]
18.1069 -20.91 0.000144231 500 4 3 2 [+] picture button
NKX6-2 ENSGACT00000003713 NK6 transcription factor related, locus 2 [Source:RefSeq_peptide;Acc:NP_796374]
17.7733 -20.76 0.000150383 500 5 1 6 [+] picture button
TEKT2 ENSGACT00000003243 Tektin-2 (Testicular tektin) (Tektin-t) (Testicular tektin B1-like protein) (Tektin-B1) (TEKTB1). [Source:Uniprot/SWISSPROT;Acc:Q9UIF3]
16.5032 -15.42 0.000164341 500 2 1 3 [+] picture button
NDUFA8 ENSGACT00000022950 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 19 kDa subunit) (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV). [Source:Uniprot/SWISSPROT;Acc:P51970]
16.7029 -14.39 0.000175128 332 5 3 6 [+] picture button
RAVER2 ENSGACT00000009468 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]
16.6118 -21.68 0.000176852 500 8 3 9 [+] picture button
ENSGACT00000016833 claudin j [Source:RefSeq_peptide;Acc:NP_571844]claudin j [Source:RefSeq_peptide;Acc:NP_571844] BY ORTHOLOGY TO:ENSDART00000081840
18.0612 -23.29 0.000182747 500 2 2 2 [+] picture button
PI4K2B ENSGACT00000024345 phosphatidylinositol 4-kinase type-II beta [Source:RefSeq_peptide;Acc:NP_060793]
16.4902 -14.2 0.000208191 500 4 1 4 [+] picture button
HECTD1 ENSGACT00000017038 E3 ubiquitin-protein ligase HECTD1 (HECT domain-containing protein 1) (E3 ligase for inhibin receptor) (EULIR). [Source:Uniprot/SWISSPROT;Acc:Q9ULT8]
17.2154 -21.92 0.00021032 408 4 1 4 [+] picture button
ODZ4 ENSGACT00000016015 Teneurin-4 (Ten-4) (Tenascin-M4) (Ten-m4) (Protein Odd Oz/ten-m homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q6N022]
16.4907 -21.45 0.000224126 500 3 2 4 [+] picture button
WDR44 ENSGACT00000027436 WD repeat protein 44 (Rabphilin-11). [Source:Uniprot/SWISSPROT;Acc:Q5JSH3]
17.7763 -21.9 0.000229857 500 5 3 7 [+] picture button
ENSGACT00000008755 Homolog of Homo sapiens "PR domain containing 16 [Source:IPI;Acc:IPI00289654]"Homolog of Homo sapiens "PR domain containing 16 [Source:IPI;Acc:IPI00289654]" BY ORTHOLOGY TO:SINFRUT00000168668
16.9548 -21.25 0.000243284 500 4 4 6 [+] picture button
FOXF1 ENSGACT00000021097 Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead- related transcription factor 1) (FREAC-1) (Forkhead-related activator 1). [Source:Uniprot/SWISSPROT;Acc:Q12946]
16.0453 -20.59 0.000252898 500 6 2 6 [+] picture button
GEMIN5 ENSGACT00000027584 Gem-associated protein 5 (Gemin5). [Source:Uniprot/SWISSPROT;Acc:Q8TEQ6]
16.4377 -16.44 0.000256062 132 4 2 5 [+] picture button
HRH2 (2 of 2) ENSGACT00000026895 Histamine H2 receptor (H2R) (Gastric receptor I). [Source:Uniprot/SWISSPROT;Acc:P25021]
16.3218 -19 0.000263782 500 4 2 4 [+] picture button
DDHD1 (2 of 2) ENSGACT00000013736 Probable phospholipase DDHD1 (EC 3.1.1.-) (DDHD domain protein 1) (Phosphatidic acid-preferring phospholipase A1 homolog) (PA-PLA1). [Source:Uniprot/SWISSPROT;Acc:Q8NEL9]
16.1569 -20.61 0.000264802 500 3 2 3 [+] picture button
PNPLA7 (1 of 2) ENSGACT00000023195 patatin-like phospholipase domain containing 7 (PNPLA7), mRNA [Source:RefSeq_dna;Acc:NM_152286]
17.8571 -24.1 0.000265138 500 2 1 2 [+] picture button
SLC25A11 ENSGACT00000001462 Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP) (Solute carrier family 25 member 11). [Source:Uniprot/SWISSPROT;Acc:Q02978]
17.5872 -18.68 0.000268701 247 5 1 3 [+] picture button
SLC25A11 ENSGACT00000001465 Mitochondrial 2-oxoglutarate/malate carrier protein (OGCP) (Solute carrier family 25 member 11). [Source:Uniprot/SWISSPROT;Acc:Q02978]
17.5872 -18.68 0.000268701 214 7 3 5 [+] picture button
ENSGACT00000009905 ataxin 2-like [Source:RefSeq_peptide;Acc:NP_997849]ataxin 2-like [Source:RefSeq_peptide;Acc:NP_997849] BY ORTHOLOGY TO:ENSDART00000025971
16.4309 -16.8 0.000286129 500 2 2 3 [+] picture button
KIAA0310 ENSGACT00000021264 Uncharacterized protein KIAA0310. [Source:Uniprot/SWISSPROT;Acc:O15027]
16.286 -19.79 0.000289437 500 3 1 5 [+] picture button
FAM120B ENSGACT00000021318 PPARgamma constitutive coactivator 1 [Source:RefSeq_peptide;Acc:NP_115824]
16.2949 -17.55 0.00031259 529 5 2 4 [+] picture button
OSR2 ENSGACT00000004626 Protein odd-skipped-related 2. [Source:Uniprot/SWISSPROT;Acc:Q8N2R0]
16.171 -22.19 0.000315224 315 6 2 7 [+] picture button
ZMYND10 ENSGACT00000001669 Zinc finger MYND domain-containing protein 10 (BLu protein). [Source:Uniprot/SWISSPROT;Acc:O75800]
17.7403 -24.03 0.00032793 500 6 3 10 [+] picture button
SSBP3 ENSGACT00000016041 Single-stranded DNA-binding protein 3 (Sequence-specific single- stranded-DNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q9BWW4]
16.854 -21.46 0.000344953 435 3 4 3 [+] picture button
ENSGACT00000005357 Homolog of Homo sapiens "TBC1 domain family, member 20 (TBC1D20), mRNA [Source:RefSeq_dna;Acc:NM_144628]"Homolog of Homo sapiens "TBC1 domain family, member 20 (TBC1D20), mRNA [Source:RefSeq_dna;Acc:NM_144628]" BY ORTHOLOGY TO:SINFRUT00000174728
16.6118 -17.05 0.000364976 500 5 2 6 [+] picture button
NOL7 ENSGACT00000023812 Nucleolar protein 7 (Nucleolar protein of 27 kDa). [Source:Uniprot/SWISSPROT;Acc:Q9UMY1]
17.6982 -26.61 0.000367703 663 2 1 2 [+] picture button
ST7L ENSGACT00000008098 suppression of tumorigenicity 7-like isoform 3 [Source:RefSeq_peptide;Acc:NP_620056]
16.2348 -22.82 0.000375651 500 4 1 5 [+] picture button
THYN1 ENSGACT00000014109 Thymocyte nuclear protein 1 (Thymocyte protein Thy28). [Source:Uniprot/SWISSPROT;Acc:Q9P016]
17.0461 -21.03 0.000387504 500 7 1 8 [+] picture button
WDR36 ENSGACT00000020436 WD repeat protein 36 (T-cell activation WD repeat-containing protein) (TA-WDRP). [Source:Uniprot/SWISSPROT;Acc:Q8NI36]
17.2632 -27.7 0.000396009 500 10 1 16 [+] picture button
POLR2D ENSGACT00000006145 DNA-directed RNA polymerase II 16 kDa polypeptide (EC 2.7.7.6) (RPB4). [Source:Uniprot/SWISSPROT;Acc:O15514]
16.4577 -25.01 0.00042101 676 5 1 5 [+] picture button

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Download table: GFF TXT
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