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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-182

825 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CLPTM1L (1 of 2) ENSGACT00000005249 cisplatin resistance related protein CRR9p [Source:RefSeq_peptide;Acc:NP_110409]
15.3702 -11.8 0.0000000038309 500 8 3 13 [+] picture button
C19orf26 ENSGACT00000017227 Protein Dos. [Source:Uniprot/SWISSPROT;Acc:Q8N350]
16.2002 -18.59 0.000000559045 500 5 1 10 [+] picture button
ENSGACT00000003412 NOT ANNOTATED
15.5522 -16.89 0.000001 500 4 1 1 [+] picture button
OSBPL10 (1 of 2) ENSGACT00000004097 Oxysterol-binding protein-related protein 10 (OSBP-related protein 10) (ORP-10). [Source:Uniprot/SWISSPROT;Acc:Q9BXB5]
15.9842 -13.55 0.00000974309 500 7 4 14 [+] picture button
C6orf103 ENSGACT00000015410 Uncharacterized protein C6orf103. [Source:Uniprot/SWISSPROT;Acc:Q8N7X0]
15.5522 -14.86 0.0000109758 500 5 1 10 [+] picture button
RALGPS1 ENSGACT00000024238 Ral GEF with PH domain and SH3 binding motif 1 [Source:RefSeq_peptide;Acc:NP_055451]
15.7682 -15.01 0.0000149724 500 7 1 11 [+] picture button
GARNL4 ENSGACT00000008261 GTPase activating Rap/RanGAP domain-like 4 [Source:RefSeq_peptide;Acc:NP_055900]
15.6035 -10.13 0.0000167952 500 6 1 8 [+] picture button
CCDC90B ENSGACT00000027687 coiled-coil domain containing 90B [Source:RefSeq_peptide;Acc:NP_068597]
15.2839 -16.19 0.000033438 551 6 1 6 [+] picture button
RAD9B ENSGACT00000017832 Cell cycle checkpoint control protein RAD9B homolog (RAD9 homolog B) (hRAD9B). [Source:Uniprot/SWISSPROT;Acc:Q6WBX8]
16.6322 -14.1 0.0000359181 500 6 2 7 [+] picture button
DCLRE1A ENSGACT00000008701 DNA cross-link repair 1A protein (hSNM1) (hSNM1A). [Source:Uniprot/SWISSPROT;Acc:Q6PJP8]
16.0406 -11.75 0.0000378796 500 8 1 14 [+] picture button
DVL1 ENSGACT00000016372 Segment polarity protein dishevelled homolog DVL-1 (Dishevelled-1) (DSH homolog 1). [Source:Uniprot/SWISSPROT;Acc:O14640]
16.6049 -15.51 0.0000383975 500 6 1 8 [+] picture button
GRIP1 ENSGACT00000000231 Glutamate receptor-interacting protein 1 (GRIP1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3R0]
16.2317 -19.81 0.0000525157 500 4 1 7 [+] picture button
GJB3 (1 of 2) ENSGACT00000009490 Gap junction beta-3 protein (Connexin-31) (Cx31). [Source:Uniprot/SWISSPROT;Acc:O75712]
16.3584 -17.5 0.000059014 500 3 1 3 [+] picture button
MTMR7 (2 of 2) ENSGACT00000021788 Myotubularin-related protein 7 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q9Y216]
16.2363 -20.48 0.0000604132 360 4 1 3 [+] picture button
SH2D1A ENSGACT00000024555 SH2 domain-containing protein 1A (Signaling lymphocyte activation molecule-associated protein) (SLAM-associated protein) (T cell signal transduction molecule SAP) (Duncan disease SH2-protein). [Source:Uniprot/SWISSPROT;Acc:O60880]
15.3173 -13.84 0.0000646861 301 4 2 6 [+] picture button
CCNG1 ENSGACT00000024067 Cyclin-G1 (Cyclin-G). [Source:Uniprot/SWISSPROT;Acc:P51959]
15.7583 -14.1 0.0000664455 500 5 1 6 [+] picture button
NP_057487.2 ENSGACT00000026984 Adrenal gland protein AD-002 (Hypothetical protein HSPC148) (Hypothetical protein ORF5). [Source:Uniprot/SPTREMBL;Acc:Q9UI29]
16.0031 -17.85 0.0000707715 232 2 1 6 [+] picture button
CHST11 ENSGACT00000025611 Carbohydrate sulfotransferase 11 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 1) (Chondroitin 4-sulfotransferase 1) (C4ST) (C4ST-1) (C4S-1). [Source:Uniprot/SWISSPROT;Acc:Q9NPF2]
15.6389 -13.35 0.0000730393 500 4 1 5 [+] picture button
FOXRED2 ENSGACT00000008979 FAD-dependent oxidoreductase domain containing 2 [Source:RefSeq_peptide;Acc:NP_079231]
15.5021 -14.43 0.0000760336 500 6 2 7 [+] picture button
KIAA1217 ENSGACT00000005056 KIAA1217 (KIAA1217), mRNA [Source:RefSeq_dna;Acc:NM_019590]
15.4216 -12.62 0.0000761017 500 6 1 7 [+] picture button
TMCC3 (2 of 2) ENSGACT00000013451 Transmembrane and coiled-coil domains protein 3. [Source:Uniprot/SWISSPROT;Acc:Q9ULS5]
15.7913 -19.15 0.0000773659 500 7 4 9 [+] picture button
TGFBI ENSGACT00000021608 Transforming growth factor-beta-induced protein ig-h3 precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP). [Source:Uniprot/SWISSPROT;Acc:Q15582]
15.3288 -14.74 0.0000816078 652 5 4 5 [+] picture button
ZFAT1 ENSGACT00000009246 Zinc finger protein 406 (ZFAT zinc finger 1). [Source:Uniprot/SWISSPROT;Acc:Q9P243]
16.2933 -24.48 0.0000832033 500 8 2 7 [+] picture button
Q6A1A2_HUMAN ENSGACT00000011845 PDPK2 protein. [Source:Uniprot/SPTREMBL;Acc:Q6A1A2]
16.6322 -13.08 0.0000843644 500 4 3 4 [+] picture button
ENSGACT00000004635 Vacuolar protein sorting-associated protein 13B (Cohen syndrome protein 1). [Source:Uniprot/SWISSPROT;Acc:Q7Z7G8]Vacuolar protein sorting-associated protein 13B (Cohen syndrome protein 1). [Source:Uniprot/SWISSPROT;Acc:Q7Z7G8] BY ORTHOLOGY TO:SINFRUT00000147862
15.8762 -10.96 0.000102927 500 7 2 9 [+] picture button
SLITRK4 ENSGACT00000024849 SLIT and NTRK-like protein 4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8IW52]
15.3903 -13.05 0.000109738 500 4 2 6 [+] picture button
FAM45A ENSGACT00000004187 Protein FAM45A. [Source:Uniprot/SWISSPROT;Acc:Q8TCE6]
16.4162 -21.83 0.000114223 500 4 2 7 [+] picture button
TCP11L1 ENSGACT00000004360 t-complex 11 (mouse) like 1 [Source:RefSeq_peptide;Acc:NP_060863]
17.0848 -14.72 0.000128339 395 7 2 7 [+] picture button
ME2 ENSGACT00000009675 NAD-dependent malic enzyme, mitochondrial precursor (EC 1.1.1.38) (NAD-ME) (Malic enzyme 2). [Source:Uniprot/SWISSPROT;Acc:P23368]
15.3834 -9.08 0.000142136 500 4 1 5 [+] picture button
RASGRP1 ENSGACT00000007802 RAS guanyl releasing protein 1 [Source:RefSeq_peptide;Acc:NP_005730]
15.2548 -18.47 0.000143535 500 7 2 6 [+] picture button
C9orf126 ENSGACT00000024374 Uncharacterized protein C9orf126. [Source:Uniprot/SWISSPROT;Acc:Q8N9R8]
16.7694 -14.46 0.000156897 500 6 1 6 [+] picture button
PPP2R5C (2 of 2) ENSGACT00000012401 Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform (PP2A, B subunit, B' gamma isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma isoform) (Renal carcinoma antigen NY- [Source:Uniprot/SWISSPROT;Acc:Q13362]
16.1243 -11.34 0.000163183 500 5 2 6 [+] picture button
RCBTB1 (1 of 2) ENSGACT00000003759 RCC1 and BTB domain-containing protein 1 (Regulator of chromosome condensation and BTB domain-containing protein 1) (Chronic lymphocytic leukemia deletion region gene 7 protein) (CLL deletion region gene 7 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDN9]
17.4962 -19.18 0.000165356 500 6 1 7 [+] picture button
SEMA3F (2 of 2) ENSGACT00000015895 Semaphorin-3F precursor (Semaphorin IV) (Sema IV) (Sema III/F). [Source:Uniprot/SWISSPROT;Acc:Q13275]
15.8017 -13.93 0.000168346 500 7 3 11 [+] picture button
ENSGACT00000004135 Novel protein containing a lectin C-type domain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L984]Novel protein containing a lectin C-type domain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L984] BY ORTHOLOGY TO:ENSDART00000090217
16.5242 -12.58 0.000169155 500 8 1 8 [+] picture button
IFIH1 ENSGACT00000007345 Interferon-induced helicase C domain-containing protein 1 (EC 3.6.1.-) (Interferon-induced with helicase C domain protein 1) (Helicase with 2 CARD domains) (Helicard) (Melanoma differentiation-associated protein 5) (MDA-5) (RNA helicase-DEAD box protein 1 [Source:Uniprot/SWISSPROT;Acc:Q9BYX4]
16.0074 -10.94 0.000190183 559 4 1 3 [+] picture button
TLR3 ENSGACT00000022330 Toll-like receptor 3 precursor (CD283 antigen). [Source:Uniprot/SWISSPROT;Acc:O15455]
15.6571 -12.13 0.000192695 388 10 2 12 [+] picture button
CNKSR1 ENSGACT00000012571 Connector enhancer of kinase suppressor of ras 1 (Connector enhancer of KSR1) (hCNK1) (Connector enhancer of KSR-like) (CNK homolog protein 1). [Source:Uniprot/SWISSPROT;Acc:Q969H4]
15.363 -17.23 0.000195327 500 9 3 10 [+] picture button
ENSGACT00000018460 Homolog of Xiphophorus maculatus "Forkhead protein xFKHR1. [Source:Uniprot/SPTREMBL;Acc:Q90YK2]"Homolog of Xiphophorus maculatus "Forkhead protein xFKHR1. [Source:Uniprot/SPTREMBL;Acc:Q90YK2]" BY ORTHOLOGY TO:SINFRUT00000129622
16.8182 -13.52 0.000197977 500 9 4 13 [+] picture button
ENSGACT00000021376 zgc:73226 [Source:RefSeq_peptide;Acc:NP_991133]zgc:73226 [Source:RefSeq_peptide;Acc:NP_991133] BY ORTHOLOGY TO:ENSDART00000031775
17.0782 -19.56 0.000208691 482 3 1 3 [+] picture button
ABLIM1 (1 of 2) ENSGACT00000004924 Actin-binding LIM protein 1 (Actin-binding LIM protein family member 1) (abLIM-1) (Actin-binding double-zinc-finger protein) (LIMAB1) (Limatin). [Source:Uniprot/SWISSPROT;Acc:O14639]
16.4162 -14.99 0.000210836 500 7 2 10 [+] picture button
CYP2R1 ENSGACT00000020660 Cytochrome P450 2R1 (EC 1.14.14.-) (Vitamin D 25-hydroxylase). [Source:Uniprot/SWISSPROT;Acc:Q6VVX0]
16.5242 -16.87 0.000222413 500 7 3 9 [+] picture button
AADAT ENSGACT00000025260 Kynurenine/alpha-aminoadipate aminotransferase mitochondrial precursor (KAT/AadAT) (Kynurenine--oxoglutarate transaminase II) (EC 2.6.1.7) (Kynurenine aminotransferase II) (Kynurenine--oxoglutarate aminotransferase II) (2-aminoadipate transaminase) (EC 2. [Source:Uniprot/SWISSPROT;Acc:Q8N5Z0]
15.6389 -15.58 0.000223532 483 6 1 12 [+] picture button
PDK4 ENSGACT00000008943 [Pyruvate dehydrogenase [lipoamide]] kinase isozyme 4, mitochondrial precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase isoform 4). [Source:Uniprot/SWISSPROT;Acc:Q16654]
15.6602 -14.97 0.00022691 500 6 1 9 [+] picture button
GUCA1B ENSGACT00000004438 Guanylyl cyclase-activating protein 2 (GCAP 2) (Guanylate cyclase activator 1B). [Source:Uniprot/SWISSPROT;Acc:Q9UMX6]
15.6602 -8.24 0.000240202 500 6 1 8 [+] picture button
PRIM2A ENSGACT00000008137 DNA primase large subunit (EC 2.7.7.-) (DNA primase 58 kDa subunit) (p58). [Source:Uniprot/SWISSPROT;Acc:P49643]
16.0205 -11.94 0.000272936 406 7 2 13 [+] picture button
RFC1 ENSGACT00000021350 Replication factor C subunit 1 (Replication factor C large subunit) (RF-C 140 kDa subunit) (Activator 1 140 kDa subunit) (Activator 1 large subunit) (A1 140 kDa subunit) (DNA-binding protein PO-GA). [Source:Uniprot/SWISSPROT;Acc:P35251]
15.6211 -17.34 0.000293535 500 5 1 5 [+] picture button
GDF8 (1 of 2) ENSGACT00000003457 Growth/differentiation factor 8 precursor (GDF-8) (Myostatin). [Source:Uniprot/SWISSPROT;Acc:O14793]
15.6602 -14.7 0.000296394 500 4 3 4 [+] picture button
SEC23IP ENSGACT00000004372 SEC23-interacting protein (p125). [Source:Uniprot/SWISSPROT;Acc:Q9Y6Y8]
15.8888 -8.37 0.000300662 294 5 3 5 [+] picture button
TSPAN12 ENSGACT00000000839 Tetraspanin-12 (Tspan-12) (Transmembrane 4 superfamily member 12) (Tetraspan NET-2). [Source:Uniprot/SWISSPROT;Acc:O95859]
15.8167 -17.15 0.000312588 500 4 1 4 [+] picture button

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Download table: GFF TXT
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