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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-135b

855 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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FOXN2 ENSGACT00000007261 Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314]
19.5599 -18.35 1.73887e-17 500 3 4 3 [+] picture button
NR3C2 ENSGACT00000022756 Mineralocorticoid receptor (MR). [Source:Uniprot/SWISSPROT;Acc:P08235]
16.2951 -16.77 0.000000000816856 500 2 11 4 [+] picture button
SV2C (2 of 2) ENSGACT00000013318 Synaptic vesicle glycoprotein 2C. [Source:Uniprot/SWISSPROT;Acc:Q496J9]
16.4416 -14.58 0.000000000862042 500 7 7 9 [+] picture button
GCG (2 of 2) ENSGACT00000018362 Glucagon precursor [Contains: Glicentin; Glicentin-related polypeptide (GRPP); Oxyntomodulin (OXY) (OXM); Glucagon; Glucagon-like peptide 1 (GLP-1); Glucagon-like peptide 1(7-37) (GLP-1(7-37)); Glucagon-like peptide 1(7-36) (GLP-1(7-36)); Glucagon-like pe [Source:Uniprot/SWISSPROT;Acc:P01275]
16.4416 -20.26 0.0000000112798 500 5 1 5 [+] picture button
WAC (1 of 2) ENSGACT00000002191 WW domain-containing adapter protein with coiled-coil. [Source:Uniprot/SWISSPROT;Acc:Q9BTA9]
18.6231 -23.58 0.000000307583 500 6 12 5 [+] picture button
MRPL33 ENSGACT00000017088 Mitochondrial 39S ribosomal protein L33 (L33mt) (MRP-L33). [Source:Uniprot/SWISSPROT;Acc:O75394]
16.5819 -14.3 0.00000093826 314 9 2 11 [+] picture button
ENSGACT00000006032 NOT ANNOTATED
18.8058 -18.9 0.000001 500 7 1 4 [+] picture button
ENSGACT00000018778 NOT ANNOTATED
15.9354 -16.28 0.000001 500 5 1 3 [+] picture button
VPS26A ENSGACT00000021248 Vacuolar protein sorting-associated protein 26A (Vesicle protein sorting 26A) (hVPS26). [Source:Uniprot/SWISSPROT;Acc:O75436]
16.65 -10.94 0.00000129551 402 6 2 7 [+] picture button
ENSGACT00000020819 hypothetical protein LOC541479 [Source:RefSeq_peptide;Acc:NP_001014314]hypothetical protein LOC541479 [Source:RefSeq_peptide;Acc:NP_001014314] BY ORTHOLOGY TO:ENSDART00000102692
18.8592 -13.95 0.00000244051 500 5 2 5 [+] picture button
TRPC1 ENSGACT00000004934 Short transient receptor potential channel 1 (TrpC1) (TRP-1 protein). [Source:Uniprot/SWISSPROT;Acc:P48995]
16.9008 -11.62 0.00000373026 500 3 1 3 [+] picture button
ANLN ENSGACT00000010764 Actin-binding protein anillin. [Source:Uniprot/SWISSPROT;Acc:Q9NQW6]
16.6565 -18.32 0.00000713039 500 5 3 6 [+] picture button
NP_001073985.1 ENSGACT00000027449 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
17.2112 -15.81 0.00000850395 500 5 3 6 [+] picture button
ATXN7 ENSGACT00000012221 Ataxin-7 (Spinocerebellar ataxia type 7 protein). [Source:Uniprot/SWISSPROT;Acc:O15265]
15.9247 -11.12 0.0000106076 500 5 4 5 [+] picture button
GDAP1 ENSGACT00000003602 Ganglioside-induced differentiation-associated protein 1 (GDAP1). [Source:Uniprot/SWISSPROT;Acc:Q8TB36]
16.811 -8.95 0.0000117686 384 7 2 10 [+] picture button
TRPM4 (1 of 2) ENSGACT00000010508 Transient receptor potential cation channel subfamily M member 4 (Long transient receptor potential channel 4) (hTRPM4) (Melastatin-4) (Calcium-activated non-selective cation channel 1). [Source:Uniprot/SWISSPROT;Acc:Q8TD43]
15.9043 -9.53 0.0000150147 500 8 1 10 [+] picture button
TBX1 ENSGACT00000017299 T-box transcription factor TBX1 (T-box protein 1) (Testis-specific T- box protein). [Source:Uniprot/SWISSPROT;Acc:O43435]
17.5415 -13.77 0.0000179938 500 6 2 11 [+] picture button
ENSGACT00000004694 nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540]nuclear receptor co-repressor/HDAC3 complex subunit [Source:RefSeq_peptide;Acc:NP_001026540] BY ORTHOLOGY TO:ENSGALT00000001912
16.3117 -11.63 0.0000245763 500 10 5 11 [+] picture button
E2F2 ENSGACT00000012648 Transcription factor E2F2 (E2F-2). [Source:Uniprot/SWISSPROT;Acc:Q14209]
17.4543 -11.35 0.0000259361 500 6 1 5 [+] picture button
FTHL17 ENSGACT00000020480 Ferritin heavy polypeptide-like 17. [Source:Uniprot/SWISSPROT;Acc:Q9BXU8]
17.1692 -10.75 0.0000276297 271 4 1 3 [+] picture button
GABRQ ENSGACT00000026866 Gamma-aminobutyric-acid receptor subunit theta precursor (GABA(A) receptor subunit theta). [Source:Uniprot/SWISSPROT;Acc:Q9UN88]
17.1778 -18.28 0.000030002 500 8 5 9 [+] picture button
SART3 ENSGACT00000011628 Squamous cell carcinoma antigen recognized by T-cells 3 (SART-3) (hSART-3) (Tat-interacting protein of 110 kDa) (Tip110). [Source:Uniprot/SWISSPROT;Acc:Q15020]
16.5297 -14.02 0.0000331932 545 7 3 7 [+] picture button
AKAP1 ENSGACT00000018057 A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84). [Source:Uniprot/SWISSPROT;Acc:Q92667]
16.3153 -9.42 0.0000338721 500 7 1 9 [+] picture button
SYDE1 ENSGACT00000013321 synapse defective 1, Rho GTPase, homolog 1 [Source:RefSeq_peptide;Acc:NP_149014]
16.5576 -18.18 0.000036003 500 6 4 12 [+] picture button
P4HA3 ENSGACT00000014971 prolyl 4-hydroxylase, alpha III subunit precursor [Source:RefSeq_peptide;Acc:NP_878907]
16.1472 -20.56 0.0000383886 492 6 2 8 [+] picture button
EPO ENSGACT00000026379 Erythropoietin precursor (Epoetin). [Source:Uniprot/SWISSPROT;Acc:P01588]
18.4834 -17.57 0.0000415811 500 4 2 5 [+] picture button
Q99687-2 ENSGACT00000007590 Meis1, myeloid ecotropic viral integration site 1 homolog 3 isoform 1 [Source:RefSeq_peptide;Acc:NP_064545]
16.1672 -14.92 0.0000475899 500 9 4 10 [+] picture button
C9 ENSGACT00000020968 Complement component C9 precursor [Contains: Complement component C9a; Complement component C9b]. [Source:Uniprot/SWISSPROT;Acc:P02748]
17.0195 -16.56 0.00004974 410 2 1 3 [+] picture button
PEX7 ENSGACT00000017973 Peroxisomal targeting signal 2 receptor (PTS2 receptor) (Peroxin-7). [Source:Uniprot/SWISSPROT;Acc:O00628]
16.0896 -11.6 0.0000522611 500 4 1 6 [+] picture button
LRRK2 ENSGACT00000012683 Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (Dardarin). [Source:Uniprot/SWISSPROT;Acc:Q5S007]
16.1192 -11.32 0.0000542368 500 9 1 8 [+] picture button
FAM130A2 ENSGACT00000007128 TGF-beta-induced apoptosis protein 2 (TAIP-2). [Source:Uniprot/SWISSPROT;Acc:Q8WYN3]
16.8715 -11.35 0.0000571432 500 5 6 15 [+] picture button
DGKE ENSGACT00000024126 Diacylglycerol kinase epsilon (EC 2.7.1.107) (Diglyceride kinase epsilon) (DGK-epsilon) (DAG kinase epsilon). [Source:Uniprot/SWISSPROT;Acc:P52429]
16.0118 -11.12 0.0000595438 500 5 1 8 [+] picture button
CHAT (2 of 2) ENSGACT00000003248 Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase) (Choline acetylase) (ChAT). [Source:Uniprot/SWISSPROT;Acc:P28329]
18.161 -19.71 0.0000605304 500 5 3 8 [+] picture button
SSH1 ENSGACT00000011709 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]
16.1192 -10.07 0.0000647805 500 10 3 8 [+] picture button
HEYL ENSGACT00000009964 hairy/enhancer-of-split related with YRPW motif-like [Source:RefSeq_peptide;Acc:NP_055386]
16.2882 -12.47 0.0000702627 500 4 2 4 [+] picture button
STK25 ENSGACT00000020801 Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Sterile 20/oxidant stress-response kinase 1) (Ste20/oxidant stress response kinase 1) (SOK-1) (Ste20-like kinase). [Source:Uniprot/SWISSPROT;Acc:O00506]
18.3062 -13.67 0.0000711203 281 4 4 4 [+] picture button
NPFFR1 ENSGACT00000017368 Neuropeptide FF receptor 1 (G-protein coupled receptor 147) (RFamide- related peptide receptor OT7T022). [Source:Uniprot/SWISSPROT;Acc:Q9GZQ6]
19.558 -19.69 0.000072309 500 3 2 3 [+] picture button
ST6GAL2 ENSGACT00000004036 beta-galactoside alpha-2,6-sialyltransferase II [Source:RefSeq_peptide;Acc:NP_115917]
16.0679 -11.65 0.0000786375 500 4 4 7 [+] picture button
ENSGACT00000018236 si:dkey-1h6.5 [Source:RefSeq_peptide;Acc:NP_999962]si:dkey-1h6.5 [Source:RefSeq_peptide;Acc:NP_999962] BY ORTHOLOGY TO:ENSDART00000008306
17.6237 -14.17 0.0000799326 500 6 4 7 [+] picture button
LOC729956 ENSGACT00000014154 RIKEN cDNA D430041B17 gene [Source:MarkerSymbol;Acc:MGI:3605641]RIKEN cDNA D430041B17 gene [Source:MarkerSymbol;Acc:MGI:3605641] BY ORTHOLOGY TO:ENSMUST00000066041
16.0529 -12.15 0.0000801811 500 4 5 4 [+] picture button
GRHL1 ENSGACT00000011693 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
17.4088 -17.08 0.0000802356 500 9 5 13 [+] picture button
FAM126A ENSGACT00000008072 Hyccin (Protein FAM126A) (Down-regulated by CTNNB1 protein A). [Source:Uniprot/SWISSPROT;Acc:Q9BYI3]
17.0555 -13.88 0.0000809901 269 5 2 5 [+] picture button
ENSGACT00000011206 NOT ANNOTATED
18.3986 -11.89 0.0000829226 320 6 1 6 [+] picture button
NP_085139.2 ENSGACT00000010744 CDNA FLJ14480 fis, clone MAMMA1002215 (KIAA1706 protein). [Source:Uniprot/SPTREMBL;Acc:Q7L9B9]
16.0322 -14.2 0.0000925492 208 3 4 5 [+] picture button
ENSGACT00000015666 Homolog of Homo sapiens "Splice Isoform 5 of Ubiquitin-conjugating enzyme E2 variant 1 [Source:IPI;Acc:IPI00454991]"Homolog of Homo sapiens "Splice Isoform 5 of Ubiquitin-conjugating enzyme E2 variant 1 [Source:IPI;Acc:IPI00454991]" BY ORTHOLOGY TO:SINFRUT00000130332
16.0501 -9 0.0000928511 500 4 3 5 [+] picture button
C2orf3 ENSGACT00000021441 GC-rich sequence DNA-binding factor (GCF) (Transcription factor 9) (TCF-9). [Source:Uniprot/SWISSPROT;Acc:P16383]
16.704 -9.07 0.0000956909 432 5 1 8 [+] picture button
PACRG ENSGACT00000006891 Parkin coregulated gene protein (PARK2 coregulated) (Molecular chaperone/chaperonin-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96M98]
17.7312 -14.78 0.00010557 500 7 1 6 [+] picture button
FOSL2 ENSGACT00000017160 Fos-related antigen 2. [Source:Uniprot/SWISSPROT;Acc:P15408]
16.8303 -11.53 0.000106512 500 5 3 5 [+] picture button
GAB2 ENSGACT00000016072 GRB2-associated-binding protein 2 (GRB2-associated binder 2) (pp100). [Source:Uniprot/SWISSPROT;Acc:Q9UQC2]
18.677 -16.34 0.000109629 500 6 2 8 [+] picture button
COG2 ENSGACT00000012946 Conserved oligomeric Golgi complex component 2 (Low density lipoprotein receptor defect C-complementing protein). [Source:Uniprot/SWISSPROT;Acc:Q14746]
17.1939 -10.68 0.000119342 500 2 1 6 [+] picture button

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Download table: GFF TXT
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