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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-128

860 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PPP4C ENSGACT00000007255 Serine/threonine-protein phosphatase 4 catalytic subunit (EC 3.1.3.16) (PP4C) (Pp4) (Protein phosphatase X) (PP-X). [Source:Uniprot/SWISSPROT;Acc:P60510]
17.3504 -23.83 0.00000000071337 500 7 2 12 [+] picture button
PDIA5 ENSGACT00000001626 Protein disulfide-isomerase A5 precursor (EC 5.3.4.1) (Protein disulfide isomerase-related protein). [Source:Uniprot/SWISSPROT;Acc:Q14554]
16.6567 -27.27 0.000000004061 724 6 3 8 [+] picture button
C1orf144 ENSGACT00000006847 putative MAPK activating protein PM20,PM21 [Source:RefSeq_peptide;Acc:NP_056424]
16.6565 -20.71 0.00000000591347 500 5 2 7 [+] picture button
PDE3B ENSGACT00000020663 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
17.1577 -18.76 0.000000027152 500 9 11 12 [+] picture button
NP_835227.1 ENSGACT00000011200 RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248]RIKEN cDNA 1300010M03 gene [Source:MarkerSymbol;Acc:MGI:1915248] BY ORTHOLOGY TO:ENSMUST00000017946
16.3092 -17.05 0.000000112374 500 8 5 10 [+] picture button
JHDM1D ENSGACT00000026440 JmjC domain-containing histone demethylation protein 1D. [Source:Uniprot/SWISSPROT;Acc:Q6ZMT4]
18.2784 -19.82 0.000000117193 500 5 3 5 [+] picture button
VEGFC ENSGACT00000021675 Vascular endothelial growth factor C precursor (VEGF-C) (Vascular endothelial growth factor-related protein) (VRP) (Flt4 ligand) (Flt4- L). [Source:Uniprot/SWISSPROT;Acc:P49767]
15.8665 -13.87 0.000000235688 500 4 8 8 [+] picture button
DCUN1D4 ENSGACT00000018782 DCN1-like protein 4 (Defective in cullin neddylation protein 1-like protein 4) (DCUN1 domain-containing protein 4). [Source:Uniprot/SWISSPROT;Acc:Q92564]
17.3966 -18.3 0.000000521767 500 1 5 3 [+] picture button
PRUNE ENSGACT00000004230 prune homolog [Source:RefSeq_peptide;Acc:NP_067045]
15.9185 -17.33 0.000001 500 8 1 7 [+] picture button
RPS7 ENSGACT00000015810 40S ribosomal protein S7. [Source:Uniprot/SWISSPROT;Acc:P62081]
15.9043 -10.19 0.00000105692 500 4 3 6 [+] picture button
CCDC92 ENSGACT00000016379 Coiled-coil domain-containing protein 92 (Limkain beta-2). [Source:Uniprot/SWISSPROT;Acc:Q53HC0]
16.5491 -21.33 0.00000188137 500 3 2 6 [+] picture button
PDE8B ENSGACT00000020838 High-affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B (EC 3.1.4.17) (HSPDE8B). [Source:Uniprot/SWISSPROT;Acc:O95263]
16.0571 -12.64 0.00000428236 500 7 1 13 [+] picture button
SV2A (1 of 2) ENSGACT00000017468 Synaptic vesicle glycoprotein 2A. [Source:Uniprot/SWISSPROT;Acc:Q7L0J3]
16.4883 -21.96 0.00000438514 500 3 1 4 [+] picture button
PHGDH ENSGACT00000006822 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH). [Source:Uniprot/SWISSPROT;Acc:O43175]
16.1459 -12.99 0.000004441 238 7 2 11 [+] picture button
ACAT2 ENSGACT00000011979 Acetyl-CoA acetyltransferase, cytosolic (EC 2.3.1.9) (Cytosolic acetoacetyl-CoA thiolase) (Acetyl CoA transferase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9BWD1]
16.4838 -16.38 0.00000534143 407 7 1 7 [+] picture button
NOV ENSGACT00000009180 Protein NOV homolog precursor (NovH) (Nephroblastoma overexpressed gene protein homolog). [Source:Uniprot/SWISSPROT;Acc:P48745]
16.5491 -21.72 0.00000552762 500 6 1 10 [+] picture button
FNBP1L ENSGACT00000007940 Formin-binding protein 1-like (Transducer of Cdc42-dependent actin assembly protein 1) (Toca-1). [Source:Uniprot/SWISSPROT;Acc:Q5T0N5]
16.1875 -16.59 0.000005801 500 3 1 6 [+] picture button
YES1 (1 of 2) ENSGACT00000022603 Proto-oncogene tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes) (c- Yes). [Source:Uniprot/SWISSPROT;Acc:P07947]
17.7999 -19.07 0.00000742155 500 5 3 9 [+] picture button
KCNS2 ENSGACT00000004622 Potassium voltage-gated channel subfamily S member 2 (Voltage-gated potassium channel subunit Kv9.2) (Delayed-rectifier K(+) channel alpha subunit 2). [Source:Uniprot/SWISSPROT;Acc:Q9ULS6]
17.1161 -15.04 0.00000951635 500 7 4 10 [+] picture button
SLC6A20 ENSGACT00000005793 Sodium- and chloride-dependent transporter XTRP3 (Solute carrier family 6 member 20) (Neurotransmitter transporter rB21A homolog). [Source:Uniprot/SWISSPROT;Acc:Q9NP91]
16.5851 -18.43 0.0000102258 500 9 2 11 [+] picture button
CRSP7 (2 of 2) ENSGACT00000020531 CRSP complex subunit 7 (Cofactor required for Sp1 transcriptional activation subunit 7) (Transcriptional coactivator CRSP70) (Activator- recruited cofactor 70 kDa component) (ARC70). [Source:Uniprot/SWISSPROT;Acc:O95402]
16.2197 -13.49 0.0000123733 500 6 5 9 [+] picture button
SLC35E4 ENSGACT00000022694 solute carrier family 35, member E4 [Source:RefSeq_peptide;Acc:NP_001001479]
15.9043 -13.18 0.0000137228 500 6 4 6 [+] picture button
VPS8 ENSGACT00000003044 Vacuolar protein sorting-associated protein 8 homolog. [Source:Uniprot/SWISSPROT;Acc:Q8N3P4]
17.9791 -16.36 0.0000140762 315 6 2 10 [+] picture button
TBC1D22B ENSGACT00000017507 TBC1 domain family member 22B. [Source:Uniprot/SWISSPROT;Acc:Q9NU19]
16.5491 -22.79 0.0000154175 500 7 1 12 [+] picture button
DPYS ENSGACT00000006343 Dihydropyrimidinase (EC 3.5.2.2) (DHPase) (Hydantoinase) (DHP). [Source:Uniprot/SWISSPROT;Acc:Q14117]
17.7377 -16.24 0.0000230162 284 4 1 13 [+] picture button
RAB11FIP2 (2 of 3) ENSGACT00000014633 Rab11 family-interacting protein 2 (Rab11-FIP2) (NRip11). [Source:Uniprot/SWISSPROT;Acc:Q7L804]
17.1273 -18.75 0.0000251606 500 5 2 9 [+] picture button
MLH3 ENSGACT00000010134 DNA mismatch repair protein Mlh3 (MutL protein homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q9UHC1]
17.6237 -22.49 0.0000255249 500 4 3 4 [+] picture button
HAT1 ENSGACT00000006557 Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48). [Source:Uniprot/SWISSPROT;Acc:O14929]
18.2594 -26.33 0.0000267049 382 7 2 9 [+] picture button
E2F8 ENSGACT00000022606 E2F family member 8 [Source:RefSeq_peptide;Acc:NP_078956]
17.154 -23.28 0.0000287429 500 5 1 5 [+] picture button
DIP2B (2 of 2) ENSGACT00000000873 DIP2 disco-interacting protein 2 homolog B [Source:RefSeq_peptide;Acc:NP_775873]
17.2542 -19.24 0.0000317648 500 5 4 5 [+] picture button
NP_001013679.2 ENSGACT00000015289 CDNA FLJ27017 fis, clone SLV05746. [Source:Uniprot/SPTREMBL;Acc:Q6ZNW5]
19.8825 -24 0.0000331062 500 3 1 6 [+] picture button
ISL1 ENSGACT00000005095 Insulin gene enhancer protein ISL-1 (Islet-1). [Source:Uniprot/SWISSPROT;Acc:P61371]
16.4446 -19.21 0.0000335766 500 4 12 7 [+] picture button
PIK3R5 (1 of 2) ENSGACT00000025654 Phosphoinositide 3-kinase regulatory subunit 5 (PI3-kinase regulatory subunit 5) (PI3-kinase p101 subunit) (PtdIns-3-kinase p101) (p101- PI3K) (Phosphatidylinositol-4,5-bisphosphate 3-kinase regulatory subunit) (PtdIns-3-kinase regulatory subunit) (Protei [Source:Uniprot/SWISSPROT;Acc:Q8WYR1]
16.2267 -19.34 0.0000339428 500 6 1 5 [+] picture button
RASSF7 (1 of 2) ENSGACT00000015042 Ras association domain-containing protein 7 (HRAS1-related cluster protein 1). [Source:Uniprot/SWISSPROT;Acc:Q02833]
17.624 -17.09 0.0000345957 266 6 1 6 [+] picture button
FBXO8 ENSGACT00000021712 F-box only protein 8 (F-box/SEC7 protein FBS). [Source:Uniprot/SWISSPROT;Acc:Q9NRD0]
18.161 -21.02 0.0000387676 500 6 2 6 [+] picture button
C10orf54 ENSGACT00000004607 Platelet receptor Gi24 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H7M9]
17.5162 -28.89 0.0000399769 500 6 1 7 [+] picture button
NM_001080452.1 ENSGACT00000026317 G protein-coupled receptor 108 (GPR108), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001080452]
17.5103 -19.51 0.0000425405 500 3 4 5 [+] picture button
SAMD1 (2 of 2) ENSGACT00000013837 Atherin (Sterile alpha motif domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6SPF0]
16.7603 -17.89 0.000044011 500 7 4 9 [+] picture button
C2orf30 ENSGACT00000007505 XTP3-transactivated gene B protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q96DZ1]
16.0838 -16.91 0.0000444718 682 2 1 2 [+] picture button
SLC35E1 ENSGACT00000011219 Solute carrier family 35 member E1. [Source:Uniprot/SWISSPROT;Acc:Q96K37]
15.9185 -17.84 0.0000450089 500 8 1 11 [+] picture button
NRCAM ENSGACT00000025011 Neuronal cell adhesion molecule precursor (Nr-CAM) (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (hBravo). [Source:Uniprot/SWISSPROT;Acc:Q92823]
16.4738 -19.37 0.0000452604 500 7 4 10 [+] picture button
ATPBD3 ENSGACT00000016903 ATP-binding domain protein 3 (Cancer-associated gene protein). [Source:Uniprot/SWISSPROT;Acc:Q7Z7A3]
16.3342 -19.16 0.0000502605 500 9 4 10 [+] picture button
PXMP2 ENSGACT00000011862 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
17.7619 -17.7 0.000052815 500 6 1 8 [+] picture button
KIAA1324 ENSGACT00000010874 KIAA1324 (KIAA1324), mRNA [Source:RefSeq_dna;Acc:NM_020775]
16.9789 -14.1 0.0000530427 500 6 2 9 [+] picture button
METTL2A ENSGACT00000011955 Methyltransferase-like protein 2 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q96IZ6]
15.9492 -14.84 0.0000603665 375 7 1 8 [+] picture button
FAM3C ENSGACT00000026219 Protein FAM3C precursor (Protein GS3786). [Source:Uniprot/SWISSPROT;Acc:Q92520]
17.0861 -18.41 0.0000614728 647 8 2 16 [+] picture button
RNPEPL1 ENSGACT00000006229 Arginyl aminopeptidase-like 1 (EC 3.4.11.-) (RNPEP-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9HAU8]
16.1192 -14.62 0.0000672514 500 8 2 10 [+] picture button
PRMT2 ENSGACT00000008344 Protein arginine N-methyltransferase 2 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:P55345]
16.0751 -18.75 0.0000718887 482 4 2 5 [+] picture button
KIAA0195 ENSGACT00000020172 Uncharacterized protein KIAA0195 (Transmembrane protein 94). [Source:Uniprot/SWISSPROT;Acc:Q12767]
16.8715 -21.6 0.0000871709 500 4 1 5 [+] picture button
DYSFIP1 (1 of 2) ENSGACT00000024074 Dysferlin-interacting protein 1 (Toonin). [Source:Uniprot/SWISSPROT;Acc:Q86WC6]
16.2909 -16.06 0.0000970679 500 3 1 4 [+] picture button

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Download table: GFF TXT
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