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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-miR-107

838 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CC2D1B ENSGACT00000021952 coiled-coil and C2 domain containing 1B [Source:RefSeq_peptide;Acc:NP_115825]
17.2191 -15.69 0.000000075712 500 4 1 5 [+] picture button
CDK6 ENSGACT00000008406 Cell division protein kinase 6 (EC 2.7.11.22) (Serine/threonine- protein kinase PLSTIRE). [Source:Uniprot/SWISSPROT;Acc:Q00534]
17.2526 -17.84 0.000000122182 500 4 2 9 [+] picture button
PELI2 ENSGACT00000016886 Protein pellino homolog 2 (Pellino-2). [Source:Uniprot/SWISSPROT;Acc:Q9HAT8]
16.6843 -20.56 0.000000332476 500 7 2 13 [+] picture button
ENSGACT00000026370 Homolog of Homo sapiens "echinoderm microtubule associated protein like 5 [Source:RefSeq_peptide;Acc:NP_899243]"Homolog of Homo sapiens "echinoderm microtubule associated protein like 5 [Source:RefSeq_peptide;Acc:NP_899243]" BY ORTHOLOGY TO:SINFRUT00000138594
17.2208 -19.82 0.000001 500 12 2 8 [+] picture button
GKAP1 ENSGACT00000010044 G kinase anchoring protein 1 [Source:RefSeq_peptide;Acc:NP_079487]
16.637 -23.92 0.0000011452 380 6 3 6 [+] picture button
WIPI2 ENSGACT00000010540 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2) (WIPI49-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y4P8]
16.0703 -20.42 0.00000116063 500 5 9 9 [+] picture button
SVEP1 ENSGACT00000025378 polydom [Source:RefSeq_peptide;Acc:NP_699197]
17.1795 -15.25 0.00000117591 500 5 7 11 [+] picture button
PDE3B ENSGACT00000020663 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
16.4128 -18.95 0.00000163333 500 9 11 12 [+] picture button
WRNIP1 ENSGACT00000023593 ATPase WRNIP1 (Werner helicase-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96S55]
16.5169 -13.72 0.00000793661 500 5 1 7 [+] picture button
EIF5 ENSGACT00000006258 Eukaryotic translation initiation factor 5 (eIF-5). [Source:Uniprot/SWISSPROT;Acc:P55010]
16.9697 -14.51 0.0000111621 269 7 3 13 [+] picture button
TULP4 (1 of 2) ENSGACT00000011704 Tubby-related protein 4 (Tubby-like protein 4) (Tubby superfamily protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRJ4]
17.7538 -18.99 0.0000153884 500 10 3 10 [+] picture button
CHRNA3 ENSGACT00000021916 Neuronal acetylcholine receptor subunit alpha-3 precursor. [Source:Uniprot/SWISSPROT;Acc:P32297]
19.8928 -26.13 0.0000153921 500 2 2 3 [+] picture button
C1orf142 ENSGACT00000023072 C1orf142 protein (Chromosome 1 open reading frame 142). [Source:Uniprot/SPTREMBL;Acc:Q8N558]
16.8982 -16.57 0.0000168046 500 4 4 7 [+] picture button
TAGLN3 ENSGACT00000003994 Transgelin-3 (Neuronal protein NP25) (Neuronal protein 22) (NP22). [Source:Uniprot/SWISSPROT;Acc:Q9UI15]
16.4704 -23.05 0.0000178185 500 6 2 9 [+] picture button
EXOC3L2 (1 of 2) ENSGACT00000026697 protein 7 transactivated by hepatitis B virus X antigen [Source:RefSeq_peptide;Acc:NP_612635]
16.0426 -14.86 0.0000179792 500 10 2 12 [+] picture button
RFX4 ENSGACT00000015676 regulatory factor X4 isoform c [Source:RefSeq_peptide;Acc:NP_998759]
17.8608 -22.13 0.0000198609 500 5 4 10 [+] picture button
CETN2 ENSGACT00000024215 Centrin-2 (Caltractin isoform 1). [Source:Uniprot/SWISSPROT;Acc:P41208]
16.8432 -21.07 0.0000198905 616 7 2 8 [+] picture button
EGFLAM ENSGACT00000010300 EGF-like, fibronectin type III and laminin G domains isoform 3 [Source:RefSeq_peptide;Acc:NP_877951]
16.5501 -18.25 0.0000204978 500 7 1 10 [+] picture button
TPCN2 ENSGACT00000019203 Two-pore calcium channel protein 2 (Voltage-dependent calcium channel protein TPC2). [Source:Uniprot/SWISSPROT;Acc:Q8NHX9]
18.2986 -22.79 0.000021156 500 5 1 7 [+] picture button
DSCR1 ENSGACT00000020169 Calcipressin-1 (Down syndrome critical region protein 1) (Myocyte- enriched calcineurin-interacting protein 1) (MCIP1) (Adapt78). [Source:Uniprot/SWISSPROT;Acc:P53805]
17.356 -23.71 0.0000316531 500 8 3 9 [+] picture button
DNAJC12 ENSGACT00000004475 DnaJ homolog subfamily C member 12 (J domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKB3]
16.3635 -19.74 0.0000322224 500 6 5 8 [+] picture button
CRH ENSGACT00000003899 Corticoliberin precursor (Corticotropin-releasing factor) (CRF) (Corticotropin-releasing hormone). [Source:Uniprot/SWISSPROT;Acc:P06850]
17.3091 -25.95 0.0000406265 191 4 6 11 [+] picture button
TPD52 ENSGACT00000004515 Tumor protein D52 (N8 protein). [Source:Uniprot/SWISSPROT;Acc:P55327]
16.0828 -16.54 0.0000530574 500 11 1 17 [+] picture button
SMPDL3A ENSGACT00000016047 Acid sphingomyelinase-like phosphodiesterase 3a precursor (EC 3.1.4.-) (ASM-like phosphodiesterase 3a). [Source:Uniprot/SWISSPROT;Acc:Q92484]
17.3665 -15.74 0.0000533171 500 4 1 8 [+] picture button
CCNU ENSGACT00000006252 Uracil-DNA glycosylase 2 (EC 3.2.2.-) (UDG2) (Cyclin-like uracil-DNA glycosylase). [Source:Uniprot/SWISSPROT;Acc:P22674]
17.0052 -20.19 0.0000581551 500 9 2 13 [+] picture button
PA2G4 ENSGACT00000012193 Proliferation-associated protein 2G4 (Cell cycle protein p38-2G4 homolog) (hG4-1) (ErbB3-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UQ80]
16.758 -17.33 0.0000587396 821 2 4 4 [+] picture button
SYT14 (2 of 2) ENSGACT00000011121 Synaptotagmin-14 (Synaptotagmin XIV) (SytXIV). [Source:Uniprot/SWISSPROT;Acc:Q8NB59]
17.3417 -20.07 0.0000602198 500 6 4 10 [+] picture button
CNIH3 ENSGACT00000005602 Cornichon homolog 3. [Source:Uniprot/SWISSPROT;Acc:Q8TBE1]
16.0426 -13.39 0.0000646865 500 5 1 6 [+] picture button
C6orf145 ENSGACT00000006431 Uncharacterized protein C6orf145. [Source:Uniprot/SPTREMBL;Acc:Q5TGL8]
16.0426 -16.23 0.0000694857 500 4 1 5 [+] picture button
FAM82B ENSGACT00000002421 Protein FAM82B. [Source:Uniprot/SWISSPROT;Acc:Q96DB5]
16.8593 -18.01 0.0000710349 403 8 4 11 [+] picture button
EPB41L3 ENSGACT00000022057 Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y2J2]
16.0844 -15.63 0.0000768389 500 5 2 7 [+] picture button
LEPR ENSGACT00000009554 Leptin receptor precursor (LEP-R) (OB receptor) (OB-R) (HuB219) (CD295 antigen). [Source:Uniprot/SWISSPROT;Acc:P48357]
17.5399 -17.53 0.0000810676 500 5 3 9 [+] picture button
BHLHB2 (2 of 2) ENSGACT00000000850 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
17.1662 -18.9 0.0000814781 500 10 4 14 [+] picture button
TMEM43 ENSGACT00000001566 Transmembrane protein 43. [Source:Uniprot/SWISSPROT;Acc:Q9BTV4]
18.3273 -16.9 0.0000956944 304 6 2 9 [+] picture button
CIAPIN1 ENSGACT00000002894 cytokine induced apoptosis inhibitor 1 (CIAPIN1), mRNA [Source:RefSeq_dna;Acc:NM_020313]
17.196 -19.37 0.0000964273 158 4 4 8 [+] picture button
PAPPA ENSGACT00000021973 Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated plasma protein-A) (PAPP-A) (Insulin-like growth factor-dependent IGF-binding protein 4 protease) (IGF-dependent IGFBP-4 protease) (IGFBP-4ase). [Source:Uniprot/SWISSPROT;Acc:Q13219]
17.326 -22.07 0.000108598 500 4 2 7 [+] picture button
GAA ENSGACT00000015522 Lysosomal alpha-glucosidase precursor (EC 3.2.1.20) (Acid maltase) (Aglucosidase alfa) [Contains: 76 kDa lysosomal alpha-glucosidase; 70 kDa lysosomal alpha-glucosidase]. [Source:Uniprot/SWISSPROT;Acc:P10253]
18.5025 -23.85 0.000112608 500 7 1 8 [+] picture button
COG2 ENSGACT00000012946 Conserved oligomeric Golgi complex component 2 (Low density lipoprotein receptor defect C-complementing protein). [Source:Uniprot/SWISSPROT;Acc:Q14746]
17.1121 -19.2 0.000114652 500 2 1 6 [+] picture button
DYNLL2 ENSGACT00000014703 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
16.9943 -19.61 0.000122267 503 7 10 9 [+] picture button
SUCLG1 ENSGACT00000023785 Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS- alpha). [Source:Uniprot/SWISSPROT;Acc:P53597]
16.3024 -16.67 0.000122418 500 4 1 3 [+] picture button
AMDHD2 ENSGACT00000019676 amidohydrolase domain containing 2 [Source:RefSeq_peptide;Acc:NP_057028]
16.7913 -15.37 0.000131435 500 4 1 6 [+] picture button
C16orf33 ENSGACT00000018500 U11/U12 snRNP 25 kDa protein (Minus-99 protein). [Source:Uniprot/SWISSPROT;Acc:Q9BV90]
18.1816 -20.78 0.000135052 500 3 1 5 [+] picture button
SUCLG1 ENSGACT00000023793 Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase subunit alpha) (SCS- alpha). [Source:Uniprot/SWISSPROT;Acc:P53597]
16.2565 -16.67 0.000136155 500 4 1 3 [+] picture button
CRHBP (1 of 2) ENSGACT00000020837 Corticotropin-releasing factor-binding protein precursor (CRF-binding protein) (CRF-BP) (Corticotropin-releasing hormone-binding protein) (CRH-BP). [Source:Uniprot/SWISSPROT;Acc:P24387]
16.6723 -16.91 0.000144318 412 7 1 14 [+] picture button
TMEM47 (2 of 2) ENSGACT00000020058 Transmembrane protein 47 (Transmembrane 4 superfamily member 10). [Source:Uniprot/SWISSPROT;Acc:Q9BQJ4]
16.0647 -15.07 0.000147643 203 5 1 8 [+] picture button
ADIPOR1 ENSGACT00000000663 Adiponectin receptor protein 1 (Progestin and adipoQ receptor family member I). [Source:Uniprot/SWISSPROT;Acc:Q96A54]
17.1382 -14.86 0.000164903 500 10 4 17 [+] picture button
CSTF2 ENSGACT00000022929 Cleavage stimulation factor 64 kDa subunit (CSTF 64 kDa subunit) (CF-1 64 kDa subunit) (CstF-64). [Source:Uniprot/SWISSPROT;Acc:P33240]
16.9237 -16.54 0.000169933 334 7 2 10 [+] picture button
ADCYAP1 (1 of 2) ENSGACT00000005497 Pituitary adenylate cyclase-activating polypeptide precursor (PACAP) [Contains: PACAP-related peptide (PRP-48); Pituitary adenylate cyclase-activating polypeptide 27 (PACAP-27) (PACAP27); Pituitary adenylate cyclase-activating polypeptide 38 (PACAP-38) (P [Source:Uniprot/SWISSPROT;Acc:P18509]
18.8035 -27.91 0.000211953 488 8 2 15 [+] picture button
TPCN1 ENSGACT00000012608 Two-pore calcium channel protein 1 (Voltage-dependent calcium channel protein TPC1). [Source:Uniprot/SWISSPROT;Acc:Q9ULQ1]
17.3826 -17.61 0.000254696 485 4 2 5 [+] picture button
TMEM170 ENSGACT00000000629 transmembrane protein 170 (TMEM170), mRNA [Source:RefSeq_dna;Acc:NM_145254]
17.0451 -17.95 0.000256572 451 7 1 11 [+] picture button

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Download table: GFF TXT
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