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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7e

890 hits found.


Page 1 of 18
1 2 3 4 5 6 7 8 9 10 11 .. 18 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.439 -19.36 0.0000000000000920453 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.1951 -15.2 0.000000000000167919 500 4 4 6 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.3038 -13.22 0.000000000111674 500 8 4 7 [+] picture button
UHRF2 ENSGACT00000022267 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]
16.1866 -19.65 0.0000000891282 500 5 4 4 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.5328 -18.78 0.000000188192 500 8 2 9 [+] picture button
GATM ENSGACT00000019873 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.6565 -18.48 0.000000333573 500 8 7 9 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
17.2829 -14.86 0.000000419296 320 3 4 6 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.0489 -17.62 0.000000519952 500 7 4 13 [+] picture button
PRIM1 ENSGACT00000020153 DNA primase small subunit (EC 2.7.7.-) (DNA primase 49 kDa subunit) (p49). [Source:Uniprot/SWISSPROT;Acc:P49642]
16.0322 -9.46 0.000000560614 187 4 1 8 [+] picture button
SPRYD4 ENSGACT00000004064 SPRY domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8WW59]
16.2267 -17.18 0.000000653369 500 5 3 6 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
16.0859 -15.17 0.000000701176 500 2 9 4 [+] picture button
EIF3S9 ENSGACT00000022154 Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Prt1 homolog) (hPrt1). [Source:Uniprot/SWISSPROT;Acc:P55884]
17.0483 -18.97 0.000000773218 494 4 3 9 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
17.2696 -14.5 0.000001 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
17.8762 -23.07 0.000001 500 11 1 3 [+] picture button
CKAP5 ENSGACT00000018666 Cytoskeleton-associated protein 5 (Colonic and hepatic tumor over- expressed protein) (Ch-TOG protein). [Source:Uniprot/SWISSPROT;Acc:Q14008]
16.5491 -17.16 0.000001406 500 4 1 7 [+] picture button
PRKCQ ENSGACT00000026600 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
16.4604 -19.15 0.00000180558 500 5 1 8 [+] picture button
AATF ENSGACT00000005107 Protein AATF (Apoptosis-antagonizing transcription factor) (Rb-binding protein Che-1). [Source:Uniprot/SWISSPROT;Acc:Q9NY61]
16.1192 -16.31 0.00000359639 500 4 1 5 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
16.6523 -14.1 0.00000374323 310 6 1 13 [+] picture button
ARID3A ENSGACT00000011098 AT-rich interactive domain-containing protein 3A (ARID domain- containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (E2F-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q99856]
16.5907 -19.6 0.00000516973 500 5 3 7 [+] picture button
MAP2K5 ENSGACT00000022350 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
17.0606 -21.23 0.00000617758 500 5 2 6 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
18.2685 -17.12 0.00000665877 500 11 1 14 [+] picture button
ENSGACT00000023999 CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377]CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377] BY ORTHOLOGY TO:CG40050-RA
16.0319 -19.9 0.00000683096 535 4 2 6 [+] picture button
BRP44L ENSGACT00000021236 Brain protein 44-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y5U8]
16.0396 -22.05 0.00000706812 500 6 2 13 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
16.6956 -16.76 0.00000794195 500 4 1 7 [+] picture button
NP_542768.1 (1 of 2) ENSGACT00000013508 CDNA FLJ20703 fis, clone KAIA1965. [Source:Uniprot/SPTREMBL;Acc:Q9NWP4]
16.5491 -17.22 0.00000813674 500 5 3 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
16.7497 -14.86 0.00000858788 504 5 1 6 [+] picture button
C20orf108 ENSGACT00000008482 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.5373 -21.65 0.00000933749 500 6 2 6 [+] picture button
GBA2 ENSGACT00000025304 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HCG7]
16.0743 -10.37 0.0000102772 332 7 3 8 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
18.1088 -17.52 0.0000107957 500 7 1 14 [+] picture button
NP_443416.1 ENSGACT00000027733 ATP synthase F0 subunit 6 [Source:RefSeq_peptide;Acc:NP_443416]
16.3466 -13.42 0.0000108263 500 6 5 7 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
16.487 -12.1 0.0000112516 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
16.7914 -20.95 0.0000113587 500 2 4 5 [+] picture button
C16orf42 ENSGACT00000011855 UPF0293 protein C16orf42. [Source:Uniprot/SWISSPROT;Acc:Q9UJK0]
16.7144 -15.62 0.0000120958 157 1 1 2 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
16.2596 -11.15 0.000012184 203 3 1 6 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
16.9766 -16.51 0.0000124385 490 5 2 7 [+] picture button
TMC1 ENSGACT00000015243 Transmembrane channel-like protein 1 (Transmembrane cochlear-expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDI8]
16.2727 -12.33 0.0000124896 500 2 2 3 [+] picture button
ENSGACT00000009596 tetratricopeptide repeat protein, putativetetratricopeptide repeat protein, putative BY ORTHOLOGY TO:AAEL008743-RA
16.0118 -18.36 0.0000125863 500 2 1 2 [+] picture button
VPS29 ENSGACT00000006239 Vacuolar protein sorting-associated protein 29 (Vesicle protein sorting 29) (hVPS29) (PEP11). [Source:Uniprot/SWISSPROT;Acc:Q9UBQ0]
16.5451 -20.15 0.0000134699 350 6 3 10 [+] picture button
NTF3 ENSGACT00000025413 Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2). [Source:Uniprot/SWISSPROT;Acc:P20783]
16.5491 -12.32 0.0000151346 500 5 8 4 [+] picture button
ENSGACT00000023134 cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase]cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase] BY ORTHOLOGY TO:B0414.5
16.1459 -14.19 0.0000153383 500 1 1 1 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
16.5491 -18.12 0.000016302 500 6 2 9 [+] picture button
HOXD3 ENSGACT00000006018 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
16.9417 -18.05 0.0000190709 500 10 4 20 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
17.4051 -18.94 0.0000204223 500 5 4 6 [+] picture button
COBLL1 ENSGACT00000007246 Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7]
16.9789 -17.41 0.000020593 500 4 1 4 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
16.764 -18.5 0.0000210979 500 5 2 7 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.9789 -17.01 0.0000213481 500 5 4 7 [+] picture button
CCS ENSGACT00000025201 Copper chaperone for superoxide dismutase (Superoxide dismutase copper chaperone). [Source:Uniprot/SWISSPROT;Acc:O14618]
16.5167 -18.89 0.0000242403 604 2 2 3 [+] picture button
SKAP2 ENSGACT00000011024 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (Src-associated adapter protein with PH and SH3 domains) (Pyk2/RAFTK-associa [Source:Uniprot/SWISSPROT;Acc:O75563]
17.6237 -20.94 0.0000270683 500 7 2 10 [+] picture button
PRTG (2 of 2) ENSGACT00000008069 protogenin [Source:RefSeq_peptide;Acc:NP_776175]
17.1939 -17.54 0.0000276246 500 7 2 6 [+] picture button
RAI16 ENSGACT00000014226 Retinoic acid-induced protein 16. [Source:Uniprot/SWISSPROT;Acc:Q86V87]
16.7431 -20.71 0.0000294102 333 8 2 11 [+] picture button

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Download table: GFF TXT
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