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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7d

871 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.4078 -24.56 0.0000000000000920453 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.1734 -21.14 0.000000000000167919 500 4 4 6 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.8473 -18.86 0.000000000111674 500 8 4 7 [+] picture button
SEMA4C ENSGACT00000017316 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
16.3733 -12.43 0.0000000294605 500 3 4 4 [+] picture button
MYC ENSGACT00000005889 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.6522 -23.06 0.0000000734567 500 9 13 15 [+] picture button
NPEPL1 ENSGACT00000000634 Syntaxin-16 (Syn16). [Source:Uniprot/SWISSPROT;Acc:O14662]
17.7377 -21.52 0.0000000991459 107 2 3 3 [+] picture button
TARBP2 ENSGACT00000008823 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.9344 -22.52 0.0000000998851 500 3 7 6 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.5491 -23.83 0.00000016415 500 9 4 13 [+] picture button
GATM ENSGACT00000019873 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.3342 -22.03 0.000000333573 500 8 7 9 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
16.9418 -18.67 0.000000419296 320 3 4 6 [+] picture button
SV2C (2 of 2) ENSGACT00000013318 Synaptic vesicle glycoprotein 2C. [Source:Uniprot/SWISSPROT;Acc:Q496J9]
16.3342 -22.13 0.000000452252 500 7 7 9 [+] picture button
FAIM2 (2 of 2) ENSGACT00000000795 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]
16.6145 -23.51 0.000000460622 500 10 2 13 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
16.721 -16.93 0.000000519952 500 7 4 13 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
17.2735 -22.36 0.000000701176 500 2 9 4 [+] picture button
ACVR1B (1 of 2) ENSGACT00000011949 Activin receptor type 1B precursor (EC 2.7.11.30) (ACTR-IB) (Serine/threonine-protein kinase receptor R2) (SKR2) (Activin receptor-like kinase 4) (ALK-4). [Source:Uniprot/SWISSPROT;Acc:P36896]
17.1022 -19.52 0.000000822493 500 7 7 9 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
17.0537 -22.1 0.000001 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
17.9866 -20.52 0.000001 500 11 1 3 [+] picture button
PENK ENSGACT00000019490 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P01210]
16.487 -19.08 0.00000146981 221 7 2 7 [+] picture button
PRKCQ ENSGACT00000026600 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
16.7918 -24.24 0.00000180558 500 5 1 8 [+] picture button
HIC2 ENSGACT00000005633 Hypermethylated in cancer 2 protein (Hic-2) (Hic-3) (HIC1-related gene on chromosome 22) (Zinc finger and BTB domain-containing protein 30). [Source:Uniprot/SWISSPROT;Acc:Q96JB3]
16.5491 -16.47 0.00000187586 500 5 4 7 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
17.5585 -18.77 0.00000374323 310 6 1 13 [+] picture button
LRRC29 ENSGACT00000018323 Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9). [Source:Uniprot/SWISSPROT;Acc:Q8WV35]
16.9789 -17.33 0.00000422148 500 3 2 3 [+] picture button
ARID3A ENSGACT00000011098 AT-rich interactive domain-containing protein 3A (ARID domain- containing protein 3A) (B-cell regulator of IgH transcription) (Bright) (E2F-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q99856]
16.3724 -19.3 0.00000516973 500 5 3 7 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
16.2267 -14.55 0.00000665877 500 11 1 14 [+] picture button
STX18 ENSGACT00000011020 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.4702 -21.3 0.00000738765 500 4 3 6 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
16.3682 -16.25 0.00000794195 500 4 1 7 [+] picture button
RBM35B ENSGACT00000021637 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.1527 -16.68 0.00000839126 500 5 2 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
17.6086 -21.43 0.00000858788 504 5 1 6 [+] picture button
C20orf108 ENSGACT00000008482 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.7549 -19.12 0.00000933749 500 6 2 6 [+] picture button
PPRC1 ENSGACT00000009710 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.487 -16.94 0.00000985341 322 4 4 6 [+] picture button
ETV2 ENSGACT00000016347 ETS translocation variant 2 (Ets-related protein 71). [Source:Uniprot/SWISSPROT;Acc:O00321]
16.2267 -15.43 0.00000989128 500 11 1 14 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
16.3842 -15.15 0.0000107957 500 7 1 14 [+] picture button
USP47 ENSGACT00000020802 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
16.4416 -15.17 0.0000111467 500 10 10 17 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.7377 -11.79 0.0000112516 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
17.008 -20.04 0.0000113587 500 2 4 5 [+] picture button
GIPC2 ENSGACT00000021933 PDZ domain-containing protein GIPC2. [Source:Uniprot/SWISSPROT;Acc:Q8TF65]
16.687 -22.92 0.0000120183 851 3 2 3 [+] picture button
ESR1 ENSGACT00000011530 Estrogen receptor (ER) (Estradiol receptor) (ER-alpha). [Source:Uniprot/SWISSPROT;Acc:P03372]
16.2549 -18.86 0.0000120982 500 4 2 5 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
19.1021 -29.57 0.000012184 203 3 1 6 [+] picture button
TMC1 ENSGACT00000015243 Transmembrane channel-like protein 1 (Transmembrane cochlear-expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDI8]
16.8151 -15.73 0.0000124896 500 2 2 3 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
17.2862 -21.5 0.0000125395 500 9 3 11 [+] picture button
NTF3 ENSGACT00000025413 Neurotrophin-3 precursor (NT-3) (Neurotrophic factor) (HDNF) (Nerve growth factor 2) (NGF-2). [Source:Uniprot/SWISSPROT;Acc:P20783]
16.2267 -15 0.0000151346 500 5 8 4 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
17.9461 -20.4 0.000016302 500 6 2 9 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
18.4862 -25.16 0.0000204223 500 5 4 6 [+] picture button
SOCS3 (2 of 2) ENSGACT00000003905 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
16.5864 -23.61 0.0000205119 500 4 3 5 [+] picture button
COBLL1 ENSGACT00000007246 Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7]
16.5491 -15.6 0.000020593 500 4 1 4 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
17.8386 -19.12 0.0000210979 500 5 2 7 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.3342 -16.82 0.0000213481 500 5 4 7 [+] picture button
SKAP2 ENSGACT00000011024 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (Src-associated adapter protein with PH and SH3 domains) (Pyk2/RAFTK-associa [Source:Uniprot/SWISSPROT;Acc:O75563]
16.2267 -15.39 0.0000270683 500 7 2 10 [+] picture button
PRTG (2 of 2) ENSGACT00000008069 protogenin [Source:RefSeq_peptide;Acc:NP_776175]
17.0864 -20.5 0.0000276246 500 7 2 6 [+] picture button
RAI16 ENSGACT00000014226 Retinoic acid-induced protein 16. [Source:Uniprot/SWISSPROT;Acc:Q86V87]
16.1813 -23.27 0.0000294102 333 8 2 11 [+] picture button

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Download table: GFF TXT
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