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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and fru-let-7a

887 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.6543 -21.96 0.0000000000000920453 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.4125 -16.52 0.000000000000167919 500 4 4 6 [+] picture button
UHRF2 ENSGACT00000022267 E3 ubiquitin-protein ligase UHRF2 (EC 6.3.2.-) (Ubiquitin-like PHD and RING finger domain-containing protein 2) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nucle [Source:Uniprot/SWISSPROT;Acc:Q96PU4]
16.1866 -22.14 0.0000000891282 500 5 4 4 [+] picture button
NPEPL1 ENSGACT00000000634 Syntaxin-16 (Syn16). [Source:Uniprot/SWISSPROT;Acc:O14662]
17.1692 -19.86 0.0000000991459 107 2 3 3 [+] picture button
E2F5 ENSGACT00000022514 Transcription factor E2F5 (E2F-5). [Source:Uniprot/SWISSPROT;Acc:Q15329]
16.3342 -24.53 0.00000016415 500 9 4 13 [+] picture button
RDX ENSGACT00000019699 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.3166 -19.4 0.000000188192 500 8 2 9 [+] picture button
ZNF644 ENSGACT00000020744 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
16.6855 -19.88 0.00000027015 500 3 3 5 [+] picture button
ENSGACT00000020304 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]" BY ORTHOLOGY TO:SINFRUT00000180296
17.9651 -21.79 0.000000419296 320 3 4 6 [+] picture button
FAIM2 (2 of 2) ENSGACT00000000795 Fas apoptotic inhibitory molecule 2 (Lifeguard protein) (Transmembrane BAX inhibitor motif-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ8]
16.6145 -21.8 0.000000460622 500 10 2 13 [+] picture button
FGF6 (1 of 2) ENSGACT00000026345 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.5953 -21.41 0.000000519952 500 7 4 13 [+] picture button
ATP2A2 (2 of 2) ENSGACT00000017795 Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class 1/2 Ca(2+) ATPase). [Source:Uniprot/SWISSPROT;Acc:P16615]
16.5178 -19.12 0.000000701176 500 2 9 4 [+] picture button
HBEGF ENSGACT00000024318 Heparin-binding EGF-like growth factor precursor (HB-EGF) (HBEGF) (Diphtheria toxin receptor) (DT-R). [Source:Uniprot/SWISSPROT;Acc:Q99075]
17.8093 -17.18 0.000001 500 5 3 8 [+] picture button
ENSGACT00000013727 NOT ANNOTATED
18.6487 -25.92 0.000001 500 11 1 3 [+] picture button
NEU3 ENSGACT00000027421 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
16.2267 -15.14 0.00000148093 500 6 1 10 [+] picture button
PRKCQ ENSGACT00000026600 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
16.7918 -24.52 0.00000180558 500 5 1 8 [+] picture button
KIAA0274 ENSGACT00000015251 SAC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q92562]
16.9921 -17.56 0.00000374323 310 6 1 13 [+] picture button
MARS2 ENSGACT00000023152 Methionyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.10) (Methionine--tRNA ligase 2) (Mitochondrial methionine--tRNA ligase) (MtMetRS). [Source:Uniprot/SWISSPROT;Acc:Q96GW9]
16.1192 -16.56 0.00000397864 500 2 1 3 [+] picture button
LRRC29 ENSGACT00000018323 Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9). [Source:Uniprot/SWISSPROT;Acc:Q8WV35]
16.1192 -17 0.00000422148 500 3 2 3 [+] picture button
PPP1R15B ENSGACT00000008886 protein phosphatase 1, regulatory subunit 15B [Source:RefSeq_peptide;Acc:NP_116222]
16.573 -24.38 0.00000506115 628 5 1 8 [+] picture button
EIF2C1 ENSGACT00000016486 Eukaryotic translation initiation factor 2C 1 (eIF2C 1) (eIF-2C 1) (Argonaute-1) (Putative RNA-binding protein Q99). [Source:Uniprot/SWISSPROT;Acc:Q9UL18]
16.0748 -21.07 0.00000576524 500 5 2 8 [+] picture button
ANAPC7 ENSGACT00000017805 Anaphase-promoting complex subunit 7 (APC7) (Cyclosome subunit 7). [Source:Uniprot/SWISSPROT;Acc:Q9UJX3]
16.5178 -17.16 0.00000582905 500 6 1 7 [+] picture button
MAP2K5 ENSGACT00000022350 Dual specificity mitogen-activated protein kinase kinase 5 (EC 2.7.12.2) (MAP kinase kinase 5) (MAPKK 5) (MAPK/ERK kinase 5). [Source:Uniprot/SWISSPROT;Acc:Q13163]
16.8432 -20.92 0.00000617758 500 5 2 6 [+] picture button
NOX5 ENSGACT00000010411 NADPH oxidase 5 (EC 1.6.3.-). [Source:Uniprot/SWISSPROT;Acc:Q96PH1]
17.0864 -22.77 0.00000624469 500 4 1 5 [+] picture button
TMEM41A (2 of 2) ENSGACT00000008026 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]
17.0864 -16.3 0.00000665877 500 11 1 14 [+] picture button
ENSGACT00000023999 CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377]CG40050-PA.3 [Source:RefSeq_peptide;Acc:NP_001015377] BY ORTHOLOGY TO:CG40050-RA
16.8869 -19.49 0.00000683096 535 4 2 6 [+] picture button
BRP44L ENSGACT00000021236 Brain protein 44-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y5U8]
16.5778 -26.57 0.00000706812 500 6 2 13 [+] picture button
STX18 ENSGACT00000011020 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.2549 -19.95 0.00000738765 500 4 3 6 [+] picture button
MARCH6 (2 of 2) ENSGACT00000019206 E3 ubiquitin-protein ligase MARCH6 (EC 6.3.2.-) (Membrane-associated RING finger protein 6) (Membrane-associated RING-CH protein VI) (MARCH-VI) (RING finger protein 176) (Protein TEB-4) (Doa10 homolog). [Source:Uniprot/SWISSPROT;Acc:O60337]
17.5686 -18.15 0.00000794195 500 4 1 7 [+] picture button
RBM35B ENSGACT00000021637 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.478 -19.52 0.00000839126 500 5 2 7 [+] picture button
ALPL ENSGACT00000006060 Alkaline phosphatase, tissue-nonspecific isozyme precursor (EC 3.1.3.1) (AP-TNAP) (TNSALP) (Alkaline phosphatase liver/bone/kidney isozyme). [Source:Uniprot/SWISSPROT;Acc:P05186]
18.1455 -23.23 0.00000858788 504 5 1 6 [+] picture button
C20orf108 ENSGACT00000008482 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.7549 -21.7 0.00000933749 500 6 2 6 [+] picture button
WDR60 ENSGACT00000005244 WD repeat protein 60. [Source:Uniprot/SWISSPROT;Acc:Q8WVS4]
17.2465 -15.91 0.0000107957 500 7 1 14 [+] picture button
KCNK6 ENSGACT00000016659 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
16.8281 -11.79 0.0000112516 74 2 3 3 [+] picture button
FGL2 (1 of 2) ENSGACT00000024966 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
18.1997 -26.46 0.0000113587 500 2 4 5 [+] picture button
C16orf42 ENSGACT00000011855 UPF0293 protein C16orf42. [Source:Uniprot/SWISSPROT;Acc:Q9UJK0]
16.9418 -16.65 0.0000120958 157 1 1 2 [+] picture button
ESR1 ENSGACT00000011530 Estrogen receptor (ER) (Estradiol receptor) (ER-alpha). [Source:Uniprot/SWISSPROT;Acc:P03372]
16.2549 -12.99 0.0000120982 500 4 2 5 [+] picture button
C2orf40 ENSGACT00000003992 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
18.0788 -21.4 0.000012184 203 3 1 6 [+] picture button
PREP ENSGACT00000012436 Prolyl endopeptidase (EC 3.4.21.26) (Post-proline cleaving enzyme) (PE). [Source:Uniprot/SWISSPROT;Acc:P48147]
17.1943 -16.82 0.0000124385 490 5 2 7 [+] picture button
TMC1 ENSGACT00000015243 Transmembrane channel-like protein 1 (Transmembrane cochlear-expressed protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8TDI8]
17.1405 -16.88 0.0000124896 500 2 2 3 [+] picture button
FRMPD1 ENSGACT00000024503 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.4165 -21.37 0.0000125395 500 9 3 11 [+] picture button
C14orf115 ENSGACT00000017112 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
18.0535 -22.87 0.000016302 500 6 2 9 [+] picture button
Q3SY89_HUMAN ENSGACT00000002722 Transcription elongation factor B polypeptide 3C (Elongin A3). [Source:Uniprot/SPTREMBL;Acc:Q3SY89]
16.1152 -16.54 0.0000163236 500 3 1 5 [+] picture button
HOXD3 ENSGACT00000006018 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
16.1717 -17.06 0.0000190709 500 10 4 20 [+] picture button
FBXL14 (1 of 2) ENSGACT00000016054 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
17.1889 -20.35 0.0000204223 500 5 4 6 [+] picture button
COBLL1 ENSGACT00000007246 Cordon-bleu protein-like 1. [Source:Uniprot/SWISSPROT;Acc:Q53SF7]
16.3342 -19.26 0.000020593 500 4 1 4 [+] picture button
ENSGACT00000005966 Neuromedin-U receptor 1 (NMU-R1) (G-protein coupled receptor 66) (G- protein coupled receptor FM-3). [Source:Uniprot/SWISSPROT;Acc:Q9HB89]Neuromedin-U receptor 1 (NMU-R1) (G-protein coupled receptor 66) (G- protein coupled receptor FM-3). [Source:Uniprot/SWISSPROT;Acc:Q9HB89] BY ORTHOLOGY TO:ENSORLT00000021365
16.4416 -20.51 0.0000210157 500 9 1 7 [+] picture button
ADRB2 (1 of 2) ENSGACT00000024447 Beta-2 adrenergic receptor (Beta-2 adrenoceptor) (Beta-2 adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P07550]
17.3013 -17.22 0.0000210979 500 5 2 7 [+] picture button
YEATS4 ENSGACT00000026066 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]
16.3733 -15.93 0.0000212083 500 8 2 13 [+] picture button
ACVR2B (1 of 2) ENSGACT00000022089 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
17.5162 -20.99 0.0000213481 500 5 4 7 [+] picture button
RBM19 ENSGACT00000012529 Probable RNA-binding protein 19 (RNA-binding motif protein 19). [Source:Uniprot/SWISSPROT;Acc:Q9Y4C8]
16.1459 -15.98 0.0000233101 215 7 2 7 [+] picture button

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Download table: GFF TXT
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