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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gasterosteus aculeatus and dre-miR-34

816 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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TMEM22 ENSGACT00000004737 Transmembrane protein 22. [Source:Uniprot/SWISSPROT;Acc:Q8TBE7]
17.3013 -20.91 0.000000048622 500 6 3 12 [+] picture button
SLC30A3 (1 of 2) ENSGACT00000016110 Zinc transporter 3 (ZnT-3) (Solute carrier family 30 member 3). [Source:Uniprot/SWISSPROT;Acc:Q99726]
17.8386 -24.93 0.000000130728 500 2 1 3 [+] picture button
FOXP2 ENSGACT00000025054 Forkhead box protein P2 (CAG repeat protein 44) (Trinucleotide repeat- containing gene 10 protein). [Source:Uniprot/SWISSPROT;Acc:O15409]
16.9231 -20.24 0.000000318198 500 6 9 7 [+] picture button
RALGPS2 ENSGACT00000019284 Ral GEF with PH domain and SH3 binding motif 2 isoform 2 [Source:RefSeq_peptide;Acc:NP_689876]
16.0942 -20.63 0.000000330401 500 3 8 5 [+] picture button
PIF1 ENSGACT00000020626 Uncharacterized protein C15orf20. [Source:Uniprot/SWISSPROT;Acc:Q9H611]
17.0555 -17.2 0.000000385734 249 9 4 16 [+] picture button
ZNF281 (2 of 2) ENSGACT00000009107 Zinc finger protein 281 (Zinc finger DNA-binding protein 99) (Transcription factor ZBP-99) (GC-box-binding zinc finger protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y2X9]
16.8417 -16.72 0.000000534014 500 8 12 8 [+] picture button
IQGAP3 ENSGACT00000004089 Ras GTPase-activating-like protein IQGAP3. [Source:Uniprot/SWISSPROT;Acc:Q86VI3]
16.6188 -20.74 0.000000579946 426 3 1 5 [+] picture button
ST6GAL1 ENSGACT00000027590 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,6-sialyltransferase (EC 2.4.99.1) (Beta-galactoside alpha-2,6-sialyltransferase) (Alpha 2,6-ST) (Sialyltransferase 1) (ST6Gal I) (B-cell antigen CD75). [Source:Uniprot/SWISSPROT;Acc:P15907]
16.4205 -18.3 0.000000596401 500 8 1 13 [+] picture button
ENSGACT00000023111 NOT ANNOTATED
17.7312 -22.27 0.000001 500 9 1 4 [+] picture button
C20orf117 ENSGACT00000007432 Uncharacterized protein C20orf117. [Source:Uniprot/SWISSPROT;Acc:O94964]
17.1772 -21.68 0.000001 500 7 3 6 [+] picture button
NTRK3 (1 of 2) ENSGACT00000019558 NT-3 growth factor receptor precursor (EC 2.7.10.1) (Neurotrophic tyrosine kinase receptor type 3) (TrkC tyrosine kinase) (GP145-TrkC) (Trk-C). [Source:Uniprot/SWISSPROT;Acc:Q16288]
16.6007 -20.39 0.00000152664 130 4 5 4 [+] picture button
PPP2R3A ENSGACT00000014489 Serine/threonine-protein phosphatase 2A 72/130 kDa regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform). [Source:Uniprot/SWISSPROT;Acc:Q06190]
16.2549 -16.38 0.00000161978 500 5 2 8 [+] picture button
ENSGACT00000021623 Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087]Complexin-2 (Complexin II) (CPX II) (Synaphin-1). [Source:Uniprot/SWISSPROT;Acc:P84087] BY ORTHOLOGY TO:ENSRNOT00000039898
17.6237 -27.55 0.00000179257 500 5 2 6 [+] picture button
TNC (1 of 2) ENSGACT00000007012 Tenascin precursor (TN) (Tenascin-C) (TN-C) (Hexabrachion) (Cytotactin) (Neuronectin) (GMEM) (JI) (Myotendinous antigen) (Glioma- associated-extracellular matrix antigen) (GP 150-225). [Source:Uniprot/SWISSPROT;Acc:P24821]
18.7132 -23.73 0.00000240594 500 6 5 10 [+] picture button
IGFBP6 (2 of 2) ENSGACT00000014167 Insulin-like growth factor-binding protein 6 precursor (IGFBP-6) (IBP- 6) (IGF-binding protein 6). [Source:Uniprot/SWISSPROT;Acc:P24592]
17.4918 -23.58 0.00000262722 500 9 3 13 [+] picture button
NP_776154.2 ENSGACT00000005241 Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P3X7]Hypothetical protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P3X7] BY ORTHOLOGY TO:ENSDART00000101135
16.2718 -16.25 0.00000298781 337 5 2 7 [+] picture button
MRPL33 ENSGACT00000017088 Mitochondrial 39S ribosomal protein L33 (L33mt) (MRP-L33). [Source:Uniprot/SWISSPROT;Acc:O75394]
16.1276 -15.07 0.00000304569 314 9 2 11 [+] picture button
COPS4 ENSGACT00000020762 COP9 signalosome complex subunit 4 (Signalosome subunit 4) (SGN4) (JAB1-containing signalosome subunit 4). [Source:Uniprot/SWISSPROT;Acc:Q9BT78]
16.7144 -19.05 0.00000319106 289 5 2 7 [+] picture button
TAF5 ENSGACT00000024164 Transcription initiation factor TFIID subunit 5 (Transcription initiation factor TFIID 100 kDa subunit) (TAF(II)100) (TAFII-100) (TAFII100). [Source:Uniprot/SWISSPROT;Acc:Q15542]
16.487 -17.59 0.00000425497 143 4 3 7 [+] picture button
C11orf9 ENSGACT00000007192 C11orf9. [Source:Uniprot/SPTREMBL;Acc:Q9P1Q6]
16.8715 -20.36 0.0000057878 500 3 1 3 [+] picture button
ATP6V0B ENSGACT00000022781 Vacuolar ATP synthase 21 kDa proteolipid subunit (EC 3.6.3.14) (HATPL). [Source:Uniprot/SWISSPROT;Acc:Q99437]
16.3733 -18.19 0.00000634637 500 2 2 2 [+] picture button
PGM1 ENSGACT00000009368 Phosphoglucomutase-1 (EC 5.4.2.2) (Glucose phosphomutase 1) (PGM 1). [Source:Uniprot/SWISSPROT;Acc:P36871]
16.1089 -24.9 0.00000763782 503 6 2 10 [+] picture button
CRTC3 ENSGACT00000023080 transducer of regulated CREB protein 3 isoform a [Source:RefSeq_peptide;Acc:NP_073606]
16.6855 -21.43 0.00000851418 500 4 1 7 [+] picture button
CD9 (1 of 2) ENSGACT00000017398 CD9 antigen (p24) (Leukocyte antigen MIC3) (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29). [Source:Uniprot/SWISSPROT;Acc:P21926]
16.3331 -19.43 0.00000938602 768 5 4 5 [+] picture button
Q5FWF1_HUMAN ENSGACT00000000043 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.3342 -25.83 0.0000100025 500 3 3 3 [+] picture button
SNX15 ENSGACT00000026148 Sorting nexin-15. [Source:Uniprot/SWISSPROT;Acc:Q9NRS6]
16.1459 -20.22 0.00001192 274 5 4 8 [+] picture button
MAPKAP1 ENSGACT00000024291 Stress-activated map kinase-interacting protein 1 (SAPK-interacting protein 1) (Putative Ras inhibitor JC310). [Source:Uniprot/SWISSPROT;Acc:Q9BPZ7]
16.3342 -15.82 0.0000130767 500 4 1 7 [+] picture button
EXTL3 ENSGACT00000011133 Exostosin-like 3 (EC 2.4.1.223) (Glucuronyl-galactosyl-proteoglycan 4- alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (EXT-related protein 1) [Source:Uniprot/SWISSPROT;Acc:O43909]
17.0653 -22.26 0.0000141832 500 5 3 6 [+] picture button
ENSGACT00000012580 NOT ANNOTATED
16.5491 -26.6 0.0000147906 500 5 1 4 [+] picture button
CHCHD4 (1 of 2) ENSGACT00000001073 Mitochondrial intermembrane space import and assembly protein 40 (Coiled-coil-helix-coiled-coil-helix domain-containing protein 4). [Source:Uniprot/SWISSPROT;Acc:Q8N4Q1]
16.1459 -24.27 0.0000153933 285 6 1 6 [+] picture button
PIK3C2G ENSGACT00000013235 Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing gamma polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2 gamma) (PI3K-C2gamma). [Source:Uniprot/SWISSPROT;Acc:O75747]
16.2267 -20.07 0.0000175468 500 4 1 5 [+] picture button
MYO1C (2 of 2) ENSGACT00000026967 Myosin-Ic (Myosin I beta) (MMI-beta) (MMIb). [Source:Uniprot/SWISSPROT;Acc:O00159]
17.395 -29.61 0.0000211882 330 6 1 9 [+] picture button
CHEK2 ENSGACT00000014280 Serine/threonine-protein kinase Chk2 (EC 2.7.11.1) (Cds1). [Source:Uniprot/SWISSPROT;Acc:O96017]
16.4416 -21.93 0.0000250148 500 10 1 11 [+] picture button
NP_060229.2 ENSGACT00000005704 CDNA FLJ20309 fis, clone HEP07296. [Source:Uniprot/SPTREMBL;Acc:Q9NXD5]
16.6565 -17.74 0.0000265669 500 6 2 7 [+] picture button
C5orf3 ENSGACT00000027582 Protein FAM114A2. [Source:Uniprot/SWISSPROT;Acc:Q9NRY5]
18.5909 -35.19 0.0000323432 500 3 1 5 [+] picture button
ARL3 ENSGACT00000004053 ADP-ribosylation factor-like protein 3. [Source:Uniprot/SWISSPROT;Acc:P36405]
16.8042 -14.58 0.0000341908 500 6 3 9 [+] picture button
SF3A1 ENSGACT00000015779 Splicing factor 3 subunit 1 (Spliceosome-associated protein 114) (SAP 114) (SF3a120). [Source:Uniprot/SWISSPROT;Acc:Q15459]
17.2829 -21.6 0.0000350575 244 2 1 5 [+] picture button
ENSGACT00000013725 Homolog of Homo sapiens "Sodium-and chloride-activated ATP-sensitive potassium channel [Source:IPI;Acc:IPI00398421]"Homolog of Homo sapiens "Sodium-and chloride-activated ATP-sensitive potassium channel [Source:IPI;Acc:IPI00398421]" BY ORTHOLOGY TO:SINFRUT00000168818
18.4125 -25.74 0.0000360096 500 6 2 7 [+] picture button
GRIA1 (2 of 2) ENSGACT00000024484 Glutamate receptor 1 precursor (GluR-1) (GluR-A) (GluR-K1) (Glutamate receptor ionotropic, AMPA 1) (AMPA-selective glutamate receptor 1). [Source:Uniprot/SWISSPROT;Acc:P42261]
16.3241 -15.73 0.0000375804 500 7 7 11 [+] picture button
C20orf72 ENSGACT00000006174 Uncharacterized protein C20orf72. [Source:Uniprot/SWISSPROT;Acc:Q9BQP7]
19.1707 -25.79 0.0000474754 516 4 1 5 [+] picture button
NUP160 ENSGACT00000010077 Nuclear pore complex protein Nup160 (Nucleoporin Nup160) (160 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q12769]
17.8696 -23.9 0.0000488307 500 8 1 9 [+] picture button
DRD1 (2 of 2) ENSGACT00000024398 D(1A) dopamine receptor. [Source:Uniprot/SWISSPROT;Acc:P21728]
17.1244 -19 0.0000505507 500 5 3 4 [+] picture button
FAM59B ENSGACT00000009914 Protein FAM59B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q75VX8]
16.9883 -30.06 0.0000506025 500 6 2 9 [+] picture button
AKR7A3 ENSGACT00000002196 Aflatoxin B1 aldehyde reductase member 3 (EC 1.-.-.-) (AFB1-AR 2). [Source:Uniprot/SWISSPROT;Acc:O95154]
16.8281 -19.02 0.0000526065 172 5 2 6 [+] picture button
IQCE ENSGACT00000021853 IQ domain-containing protein E. [Source:Uniprot/SWISSPROT;Acc:Q6IPM2]
16.8191 -24.9 0.0000528293 500 8 2 10 [+] picture button
PDE8A ENSGACT00000019876 High-affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A (EC 3.1.4.17). [Source:Uniprot/SWISSPROT;Acc:O60658]
18.0889 -27.43 0.00005351 500 4 4 5 [+] picture button
ARHGAP26 ENSGACT00000027454 Rho GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase). [Source:Uniprot/SWISSPROT;Acc:Q9UNA1]
16.2267 -18.16 0.0000541095 500 8 3 12 [+] picture button
SOD1 ENSGACT00000027267 Superoxide dismutase [Cu-Zn] (EC 1.15.1.1). [Source:Uniprot/SWISSPROT;Acc:P00441]
16.942 -23.86 0.000055392 500 4 1 7 [+] picture button
Q6R2W0_GASAC ENSGACT00000017969 Transcription factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6R2W0]
16.1508 -21.89 0.0000570453 500 5 1 8 [+] picture button
PDZD11 ENSGACT00000022688 PDZ domain-containing protein 11. [Source:Uniprot/SWISSPROT;Acc:Q5EBL8]
16.4628 -21.15 0.0000571184 525 5 1 5 [+] picture button

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Download table: GFF TXT
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