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Target Listing




Highlighted rows in the table indicate genes with published known targets


All miRNA hits for Gasterosteus aculeatus

25070 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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FOXN2 ENSGACT00000007261 Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314]
54 -55 1.73887e-17 500 3 4 3 [+] picture button
YOD1 ENSGACT00000006146 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
68 -76 0.0000000000000920453 500 4 3 9 [+] picture button
LIN28B ENSGACT00000012454 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
69 -96 0.000000000000167919 500 4 4 6 [+] picture button
NR6A1 ENSGACT00000004676 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
37 -36 0.000000000000199162 125 2 12 2 [+] picture button
NP_055530.2 ENSGACT00000026707 Rho GTPase-activating protein [Source:RefSeq_peptide;Acc:NP_055530]
70 -71 0.000000000000545163 500 4 12 5 [+] picture button
NSMAF ENSGACT00000002771 Protein FAN (Factor associated with N-SMase activation) (Factor associated with neutral sphingomyelinase activation). [Source:Uniprot/SWISSPROT;Acc:Q92636]
133 -112 0.00000000000249234 386 8 11 10 [+] picture button
PDE3A (2 of 2) ENSGACT00000013279 cGMP-inhibited 3',5'-cyclic phosphodiesterase A (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase A) (CGI-PDE A). [Source:Uniprot/SWISSPROT;Acc:Q14432]
69 -72 0.00000000000415124 500 4 11 5 [+] picture button
SH3KBP1 ENSGACT00000007191 SH3 domain-containing kinase-binding protein 1 (Cbl-interacting protein of 85 kDa) (Human Src-family kinase-binding protein 1) (HSB-1) (CD2-binding protein 3) (CD2BP3). [Source:Uniprot/SWISSPROT;Acc:Q96B97]
83 -111 0.0000000000112506 500 5 10 4 [+] picture button
LNPEP ENSGACT00000012974 Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP). [Source:Uniprot/SWISSPROT;Acc:Q9UIQ6]
82 -83 0.0000000000150361 500 5 9 7 [+] picture button
KIAA1432 ENSGACT00000022249 KIAA1432 (KIAA1432), mRNA [Source:RefSeq_dna;Acc:NM_020829]
67 -64 0.0000000000221662 500 4 4 6 [+] picture button
TCP11L1 ENSGACT00000004360 t-complex 11 (mouse) like 1 [Source:RefSeq_peptide;Acc:NP_060863]
114 -98 0.000000000022495 395 7 2 7 [+] picture button
PDE3B ENSGACT00000020663 cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC 3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B) (CGI-PDE B) (CGIPDE1) (CGIP1). [Source:Uniprot/SWISSPROT;Acc:Q13370]
149 -160 0.0000000000261536 500 9 11 12 [+] picture button
SNX7 ENSGACT00000001210 Sorting nexin-7. [Source:Uniprot/SWISSPROT;Acc:Q9UNH6]
102 -117 0.0000000000365027 498 6 2 7 [+] picture button
ZFPM2 ENSGACT00000006324 Zinc finger protein ZFPM2 (Zinc finger protein multitype 2) (Friend of GATA protein 2) (FOG-2) (hFOG-2). [Source:Uniprot/SWISSPROT;Acc:Q8WW38]
153 -141 0.0000000000616143 500 9 14 18 [+] picture button
ARPC1B ENSGACT00000022036 Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC). [Source:Uniprot/SWISSPROT;Acc:O15143]
208 -193 0.0000000000630766 382 12 6 15 [+] picture button
TRIM71 ENSGACT00000011014 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
133 -159 0.000000000111674 500 8 4 7 [+] picture button
PTPN4 ENSGACT00000010366 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
118 -157 0.000000000114927 500 7 4 15 [+] picture button
NEDD9 ENSGACT00000003060 Enhancer of filamentation 1 (HEF1) (CRK-associated substrate-related protein) (CAS-L) (CasL) (p105) (Protein NEDD9) (Renal carcinoma antigen NY-REN-12). [Source:Uniprot/SWISSPROT;Acc:Q14511]
117 -125 0.000000000128591 500 7 3 11 [+] picture button
SH3RF1 ENSGACT00000018655 SH3 domain containing ring finger 1 [Source:RefSeq_peptide;Acc:NP_065921]
117 -106 0.000000000138591 500 7 1 9 [+] picture button
PAN3 ENSGACT00000004055 PAB-dependent poly(A)-specific ribonuclease subunit 3 (hPan3). [Source:Uniprot/SWISSPROT;Acc:Q58A45]
37 -49 0.000000000192505 500 2 14 5 [+] picture button
PRDM1 (1 of 2) ENSGACT00000002269 PR domain zinc finger protein 1 (PR domain-containing protein 1) (Beta-interferon gene positive-regulatory domain I-binding factor) (BLIMP-1) (Positive regulatory domain I-binding factor 1) (PRDI- binding factor 1) (PRDI-BF1). [Source:Uniprot/SWISSPROT;Acc:O75626]
133 -115 0.000000000211808 500 8 5 9 [+] picture button
GRM3 ENSGACT00000016862 Metabotropic glutamate receptor 3 precursor (mGluR3). [Source:Uniprot/SWISSPROT;Acc:Q14832]
114 -96 0.000000000221455 500 7 12 9 [+] picture button
NIPA2 ENSGACT00000018260 Non-imprinted in Prader-Willi/Angelman syndrome region protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N8Q9]
131 -131 0.000000000227916 472 8 10 9 [+] picture button
ATP6V0E1 ENSGACT00000024423 Vacuolar ATP synthase subunit e1 (EC 3.6.3.14) (V-ATPase subunit e1) (Vacuolar proton pump subunit e1) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein). [Source:Uniprot/SWISSPROT;Acc:O15342]
132 -128 0.000000000246128 500 8 4 8 [+] picture button
GLI3 ENSGACT00000006408 Zinc finger protein GLI3. [Source:Uniprot/SWISSPROT;Acc:P10071]
98 -90 0.000000000324955 500 6 11 7 [+] picture button
FAM59A ENSGACT00000002569 Protein FAM59A. [Source:Uniprot/SWISSPROT;Acc:Q9H706]
132 -107 0.000000000476349 500 8 9 10 [+] picture button
DDEF1 ENSGACT00000006022 130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase- activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor- directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differentiation-enhancing f [Source:Uniprot/SWISSPROT;Acc:Q9ULH1]
116 -101 0.00000000053993 513 7 6 13 [+] picture button
Q86XQ1_HUMAN ENSGACT00000017074 XTP9. [Source:Uniprot/SPTREMBL;Acc:Q86XQ1]
54 -53 0.000000000549335 500 3 6 5 [+] picture button
TMEM91 ENSGACT00000017230 Transmembrane protein 91. [Source:Uniprot/SWISSPROT;Acc:Q6ZNR0]
100 -97 0.000000000694665 489 6 3 10 [+] picture button
ADORA2B ENSGACT00000026827 Adenosine A2b receptor. [Source:Uniprot/SWISSPROT;Acc:P29275]
138 -154 0.000000000822336 500 8 4 10 [+] picture button
LRP2 ENSGACT00000006970 Low-density lipoprotein receptor-related protein 2 precursor (Megalin) (Glycoprotein 330) (gp330). [Source:Uniprot/SWISSPROT;Acc:P98164]
137 -130 0.00000000082244 500 8 14 13 [+] picture button
SV2C (2 of 2) ENSGACT00000013318 Synaptic vesicle glycoprotein 2C. [Source:Uniprot/SWISSPROT;Acc:Q496J9]
116 -131 0.000000000862042 500 7 7 9 [+] picture button
BHLHB2 (1 of 2) ENSGACT00000015850 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
86 -109 0.000000000967426 500 5 4 6 [+] picture button
CLIP4 ENSGACT00000016988 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
122 -111 0.00000000124102 500 7 9 18 [+] picture button
RSU1 ENSGACT00000002162 Ras suppressor protein 1 (Rsu-1) (RSP-1). [Source:Uniprot/SWISSPROT;Acc:Q15404]
117 -142 0.00000000128224 571 7 3 11 [+] picture button
WEE1 ENSGACT00000012920 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
136 -149 0.00000000130531 500 8 3 14 [+] picture button
PKD2 ENSGACT00000022948 Polycystin-2 (Polycystic kidney disease 2 protein homolog) (Autosomal dominant polycystic kidney disease type II protein) (Polycystwin) (R48321). [Source:Uniprot/SWISSPROT;Acc:Q13563]
68 -61 0.00000000134441 674 4 2 7 [+] picture button
PRKAA1 ENSGACT00000021059 5'-AMP-activated protein kinase catalytic subunit alpha-1 (EC 2.7.11.1) (AMPK alpha-1 chain). [Source:Uniprot/SWISSPROT;Acc:Q13131]
122 -130 0.00000000145587 500 7 8 12 [+] picture button
TIMP2 (2 of 2) ENSGACT00000014645 Metalloproteinase inhibitor 2 precursor (TIMP-2) (Tissue inhibitor of metalloproteinases 2) (CSC-21K). [Source:Uniprot/SWISSPROT;Acc:P16035]
53 -40 0.00000000183454 174 3 1 6 [+] picture button
FOXJ3 (2 of 2) ENSGACT00000008968 Forkhead box protein J3. [Source:Uniprot/SWISSPROT;Acc:Q9UPW0]
99 -109 0.00000000214181 500 6 2 7 [+] picture button
PDHB ENSGACT00000005219 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B). [Source:Uniprot/SWISSPROT;Acc:P11177]
79 -86 0.00000000219066 598 5 1 5 [+] picture button
ASB7 ENSGACT00000018498 Ankyrin repeat and SOCS box protein 7 (ASB-7). [Source:Uniprot/SWISSPROT;Acc:Q9H672]
71 -75 0.00000000226631 500 4 11 4 [+] picture button
BAMBI ENSGACT00000002180 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
85 -90 0.0000000023115 500 5 13 13 [+] picture button
GRAMD1B ENSGACT00000008825 GRAM domain containing 1B [Source:RefSeq_peptide;Acc:NP_065767]
101 -99 0.00000000232312 500 6 4 12 [+] picture button
PCMTD1 ENSGACT00000023752 Protein-L-isoaspartate O-methyltransferase domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96MG8]
51 -67 0.00000000237113 500 3 8 4 [+] picture button
P25A_HUMAN ENSGACT00000011381 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
153 -147 0.00000000271308 500 9 9 14 [+] picture button
USP47 ENSGACT00000020802 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
169 -187 0.00000000273398 500 10 10 17 [+] picture button
PI15 ENSGACT00000003579 protease inhibitor 15 preproprotein [Source:RefSeq_peptide;Acc:NP_056970]
67 -74 0.00000000302226 500 4 4 6 [+] picture button
PDE4A (1 of 2) ENSGACT00000018291 cAMP-specific 3',5'-cyclic phosphodiesterase 4A (EC 3.1.4.17) (DPDE2) (PDE46). [Source:Uniprot/SWISSPROT;Acc:P27815]
67 -64 0.00000000319542 500 4 2 4 [+] picture button
SMOX ENSGACT00000023329 Spermine oxidase (EC 1.5.3.-) (Polyamine oxidase 1) (PAO-1) (PAOh1). [Source:Uniprot/SWISSPROT;Acc:Q9NWM0]
137 -113 0.00000000322473 340 8 5 18 [+] picture button

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