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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-34b

865 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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tax1bp3 ENSDART00000082223 Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:RefSeq_peptide;Acc:NP_998635]
17.9732 -21.96 0.00000000651253 744 4 1 4 [+] picture button
zgc:110210 ENSDART00000021502 hypothetical protein LOC550517 [Source:RefSeq_peptide;Acc:NP_001017819]
17.1886 -23.77 0.000000201104 694 7 9 9 [+] picture button
si:ch211-234f14.1 ENSDART00000102888 Novel protein similar to vertebrate cyclin-dependent kinase 6 (CDK6) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1L915]
16.7693 -22.47 0.000000264652 700 9 1 13 [+] picture button
ralgps2 ENSDART00000037420 Ral-A exchange factor RalGPS2 [Source:RefSeq_peptide;Acc:NP_956768]
16.9039 -19.26 0.000000330401 700 5 8 5 [+] picture button
rb1 ENSDART00000024309 hypothetical protein LOC777733 [Source:RefSeq_peptide;Acc:NP_001071248]
16.208 -20.67 0.000000357498 700 3 1 3 [+] picture button
st6gal1 ENSDART00000065366 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:RefSeq_peptide;Acc:NP_001003853]
18.2545 -22.11 0.000000596401 456 7 1 10 [+] picture button
zgc:91850 ENSDART00000066127 hypothetical protein LOC445078 [Source:RefSeq_peptide;Acc:NP_001003472]
16.9307 -20.62 0.000001 700 6 1 4 [+] picture button
LOC100003608 ENSDART00000099357 proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151]proline rich 5 (renal) [Source:RefSeq_peptide;Acc:NP_001025151] BY ORTHOLOGY TO:ENSGALT00000022984
17.566 -25.19 0.000001 700 11 2 2 [+] picture button
A5D6S3_DANRE ENSDART00000085442 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:A5D6S3]
16.6209 -24.39 0.00000152547 700 4 2 4 [+] picture button
tnc ENSDART00000078607 tenascin C [Source:RefSeq_peptide;Acc:NP_570982]
16.0647 -16.41 0.00000240594 154 5 2 8 [+] picture button
tbca ENSDART00000023997 tubulin cofactor a [Source:RefSeq_peptide;Acc:NP_957348]
19.3455 -21.25 0.00000248568 240 5 3 12 [+] picture button
LOC647309 ENSDART00000099496 gene model 606, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685452]gene model 606, (NCBI) [Source:MarkerSymbol;Acc:MGI:2685452] BY ORTHOLOGY TO:ENSMUST00000089832
16.9307 -22.45 0.00000254137 700 9 2 12 [+] picture button
rsu1 ENSDART00000066593 Rsu1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5U3F0]
16.4145 -20.99 0.00000384237 700 4 1 5 [+] picture button
taf5 ENSDART00000015007 TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:RefSeq_peptide;Acc:NP_001032508]
17.794 -20.94 0.00000425497 399 6 1 7 [+] picture button
zgc:103525 ENSDART00000058735 Glycosyltransferase 8 domain-containing protein 1 (EC 2.4.1.-). [Source:Uniprot/SWISSPROT;Acc:Q5U3H3]
16.2909 -18.11 0.00000495356 221 7 4 12 [+] picture button
tbc1d19 ENSDART00000025308 TBC1 domain family, member 19 [Source:RefSeq_peptide;Acc:NP_956785]
17.196 -15.83 0.0000051988 209 7 2 17 [+] picture button
LOC571958 ENSDART00000066579 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393]6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393] BY ORTHOLOGY TO:ENSXETT00000019399
16.8566 -18.13 0.00000536351 700 3 1 5 [+] picture button
FAM83H (1 of 2) ENSDART00000099714 family with sequence similarity 83, member H (FAM83H), mRNA [Source:RefSeq_dna;Acc:NM_198488]
16.208 -16.69 0.00000538184 700 9 1 10 [+] picture button
mmp2 ENSDART00000026712 matrix metalloproteinase 2 [Source:RefSeq_peptide;Acc:NP_932333]
16.3558 -20.2 0.00000615316 849 2 3 5 [+] picture button
LOC795882 ENSDART00000074281 UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7]UPF0193 protein EVG1. [Source:Uniprot/SWISSPROT;Acc:Q9BZE7] BY ORTHOLOGY TO:ENSGALT00000020086
16.3355 -18.2 0.00000687324 700 8 3 8 [+] picture button
zgc:56174 ENSDART00000037698 uridine-cytidine kinase 2 [Source:RefSeq_peptide;Acc:NP_956058]
16.2134 -21.11 0.00000851767 948 6 4 8 [+] picture button
cd9 ENSDART00000019571 CD9 antigen [Source:RefSeq_peptide;Acc:NP_997784]
16.4693 -16.22 0.00000938602 417 6 4 7 [+] picture button
LOC555645 ENSDART00000085754 GTP-binding protein RAB19B [Source:RefSeq_peptide;Acc:NP_001008749]GTP-binding protein RAB19B [Source:RefSeq_peptide;Acc:NP_001008749] BY ORTHOLOGY TO:ENSMMUT00000014582
16.208 -22.31 0.0000112743 700 4 1 3 [+] picture button
LOC566046 ENSDART00000093239 Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905]Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905] BY ORTHOLOGY TO:ENSPTRT00000020015
16.8694 -20.24 0.000011777 700 4 3 4 [+] picture button
zgc:92599 ENSDART00000026516 hypothetical protein LOC447868 [Source:RefSeq_peptide;Acc:NP_001004607]
17.5288 -24.09 0.0000119694 669 8 2 13 [+] picture button
zgc:101803 ENSDART00000059636 hypothetical protein LOC450030 [Source:RefSeq_peptide;Acc:NP_001006051]
16.6456 -17.27 0.0000153933 316 7 1 11 [+] picture button
lmnb1 ENSDART00000065037 lamin B1 [Source:RefSeq_peptide;Acc:NP_694504]
16.2628 -17.48 0.0000167731 1069 3 1 3 [+] picture button
A3QK21_DANRE ENSDART00000077152 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:A3QK21]
16.6209 -19.97 0.0000183704 700 8 2 8 [+] picture button
XR_029238.1 ENSDART00000074694 similar to putative beta-2 adrenergic receptor (LOC565838), mRNA [Source:RefSeq_dna;Acc:XR_029238]
16.208 -13.68 0.0000186076 700 4 1 5 [+] picture button
ikbkg ENSDART00000079852 inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:RefSeq_peptide;Acc:NP_001014366]
17.5547 -17.87 0.0000232897 445 6 1 12 [+] picture button
PTPRG ENSDART00000092552 Receptor-type tyrosine-protein phosphatase gamma precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma). [Source:Uniprot/SWISSPROT;Acc:P23470]
16.4865 -20.98 0.0000244132 700 5 12 8 [+] picture button
zgc:101741 ENSDART00000080744 hypothetical protein LOC573562 [Source:RefSeq_peptide;Acc:NP_001038694]
16.6303 -17.69 0.0000249292 151 4 1 14 [+] picture button
zgc:109897 ENSDART00000101666 hypothetical protein LOC553544 [Source:RefSeq_peptide;Acc:NP_001018359]
16.8986 -19.73 0.0000249909 700 6 3 7 [+] picture button
hells ENSDART00000080465 hypothetical protein LOC553328 [Source:RefSeq_peptide;Acc:NP_001032178]
17.9203 -19.47 0.0000281044 410 10 2 16 [+] picture button
zgc:56412 ENSDART00000101740 hypothetical protein LOC406666 [Source:RefSeq_peptide;Acc:NP_998522]
17.5342 -27.3 0.0000305827 700 5 3 7 [+] picture button
FBXW9 ENSDART00000080815 F-box/WD repeat protein 9 (F-box and WD-40 domain protein 9). [Source:Uniprot/SWISSPROT;Acc:Q5XUX1]
16.8956 -16.66 0.0000373107 700 4 1 6 [+] picture button
gria1a ENSDART00000021437 AMPA receptor subunit GluR1A [Source:RefSeq_peptide;Acc:NP_991161]
16.7435 -19.52 0.0000375804 187 1 2 1 [+] picture button
snx14 ENSDART00000104725 sorting nexin 14 [Source:RefSeq_peptide;Acc:NP_001038258]
16.369 -13.08 0.0000418339 325 6 2 11 [+] picture button
sptb ENSDART00000040627 spectrin, beta, erythrocytic [Source:RefSeq_peptide;Acc:NP_571600]
17.8748 -19.22 0.0000423007 280 5 2 10 [+] picture button
plekhf1 ENSDART00000036597 pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:RefSeq_peptide;Acc:NP_956634]
16.4041 -17.05 0.000050956 223 8 1 19 [+] picture button
zgc:91834 ENSDART00000080343 hypothetical protein LOC431749 [Source:RefSeq_peptide;Acc:NP_001002202]
17.5354 -18.85 0.0000548936 253 7 2 15 [+] picture button
zgc:112335 ENSDART00000024135 hypothetical protein LOC554127 [Source:RefSeq_peptide;Acc:NP_001019593]
16.9697 -17.84 0.0000550991 240 7 8 20 [+] picture button
LOC100000469 ENSDART00000074190 Homolog of Carassius auratus "Interferon-inducible protein Gig1. [Source:Uniprot/SPTREMBL;Acc:Q7T2N1]"Homolog of Carassius auratus "Interferon-inducible protein Gig1. [Source:Uniprot/SPTREMBL;Acc:Q7T2N1]" BY ORTHOLOGY TO:SINFRUT00000182803
16.9307 -21.74 0.0000562487 700 2 1 2 [+] picture button
wu:fj56a04 ENSDART00000059600 Rab3 GTPase-activating protein catalytic subunit. [Source:Uniprot/SWISSPROT;Acc:Q6NUV0]
17.0299 -8.66 0.000056657 700 11 2 11 [+] picture button
zgc:101589 ENSDART00000083701 hypothetical protein LOC494103 [Source:RefSeq_peptide;Acc:NP_001008646]
16.7744 -24.13 0.000057303 700 7 1 9 [+] picture button
zgc:110245 ENSDART00000052352 Protein phosphatase 1 regulatory subunit 11. [Source:Uniprot/SWISSPROT;Acc:Q568K2]
16.0863 -14.84 0.0000579164 552 8 2 9 [+] picture button
cpne3 ENSDART00000011886 copine III [Source:RefSeq_peptide;Acc:NP_956461]
16.4356 -15.53 0.0000584729 560 6 1 7 [+] picture button
si:dkey-189h5.5 ENSDART00000047358 Novel protein (Im:5411885). [Source:Uniprot/SPTREMBL;Acc:A3QK11]
16.2981 -21.97 0.0000603221 700 5 2 6 [+] picture button
slc7a4 ENSDART00000098701 solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 [Source:RefSeq_peptide;Acc:NP_919408]
16.1778 -15.01 0.0000603489 252 6 4 11 [+] picture button
Q568U1_DANRE ENSDART00000059004 LOC553505 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q568U1]
17.6678 -19.59 0.0000606046 700 6 1 5 [+] picture button

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Download table: GFF TXT
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