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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-30e

789 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
melk ENSDART00000047728 maternal embryonic leucine zipper kinase [Source:RefSeq_peptide;Acc:NP_996771]
17.508 -10.4 0.0000000331796 318 8 7 14 [+] picture button
NP_001029093.1 ENSDART00000076974 hypothetical protein LOC569945 [Source:RefSeq_peptide;Acc:NP_001029093]
17.3276 -18.79 0.000000052207 700 6 2 7 [+] picture button
sox3 ENSDART00000075617 Transcription factor Sox-3. [Source:Uniprot/SWISSPROT;Acc:Q6EJB7]
17.8384 -15.75 0.000000069473 700 7 4 7 [+] picture button
DAGLA ENSDART00000091567 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
16.3469 -15.12 0.000000145802 700 7 6 8 [+] picture button
dll4 ENSDART00000103320 delta-like 4 [Source:RefSeq_peptide;Acc:NP_001073304]
17.2523 -16.26 0.000000161718 695 9 2 10 [+] picture button
LOC572113 ENSDART00000013257 hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377]hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377] BY ORTHOLOGY TO:ENSBTAT00000009388
17.3247 -14.31 0.000000216726 700 3 14 7 [+] picture button
rmi1 ENSDART00000060657 RMI1, RecQ mediated genome instability 1, homolog [Source:RefSeq_peptide;Acc:NP_956474]
17.1692 -11.73 0.000000223826 266 9 2 17 [+] picture button
lmbr1l ENSDART00000027224 Limb region 1 homolog-like protein. [Source:Uniprot/SWISSPROT;Acc:Q803C7]
16.7522 -12.57 0.000000268399 625 6 1 9 [+] picture button
msxd ENSDART00000003441 Homeobox protein MSH-D. [Source:Uniprot/SWISSPROT;Acc:Q01704]
16.2197 -13.71 0.000000349554 548 9 3 9 [+] picture button
zgc:113196 ENSDART00000006451 hypothetical protein LOC548335 [Source:RefSeq_peptide;Acc:NP_001017539]
17.3127 -17.39 0.00000073218 1073 11 1 11 [+] picture button
zgc:92136 ENSDART00000034054 Nogo-B receptor precursor (NgBR) (Nuclear undecaprenyl pyrophosphate synthase 1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6DHR8]
17.0362 -13.31 0.000000824341 303 7 1 10 [+] picture button
ROBO1 ENSDART00000097132 Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U twenty twenty). [Source:Uniprot/SWISSPROT;Acc:Q9Y6N7]
17.2161 -17.62 0.000001 700 10 1 8 [+] picture button
Q1LY86_DANRE ENSDART00000092695 Novel protein similar to vertebrate junctional adhesion molecule 3 (JAM3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY86]
16.905 -14.19 0.000001 700 12 1 5 [+] picture button
zgc:112011 ENSDART00000079928 hypothetical protein LOC553668 [Source:RefSeq_peptide;Acc:NP_001018477]
17.8948 -16.86 0.00000128746 813 7 1 9 [+] picture button
NP_001038599.2 ENSDART00000086165 hypothetical protein LOC567503 [Source:RefSeq_peptide;Acc:NP_001038599]
16.2827 -12.42 0.00000171429 700 4 5 4 [+] picture button
fvt1 ENSDART00000022621 3-ketodihydrosphingosine reductase [Source:RefSeq_peptide;Acc:NP_957433]
16.4548 -16.68 0.00000251831 853 7 2 8 [+] picture button
zgc:86709 ENSDART00000080664 hypothetical protein LOC415156 [Source:RefSeq_peptide;Acc:NP_001002066]
19.2158 -16.87 0.00000270185 222 6 10 10 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.1692 -12.15 0.00000463301 276 10 3 15 [+] picture button
LOC570043 ENSDART00000059652 terminal deoxycytidyl transferase rev1terminal deoxycytidyl transferase rev1 BY ORTHOLOGY TO:AAEL002250-RA
16.7175 -17.35 0.00000484452 700 11 3 15 [+] picture button
zcrb1 ENSDART00000067174 Zinc finger CCHC-type and RNA-binding motif-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SP50]
16.2483 -8.27 0.00000564564 321 5 4 7 [+] picture button
ppapdc1b ENSDART00000064603 phosphatidic acid phosphatase type 2 domain containing 1B [Source:RefSeq_peptide;Acc:NP_001002211]
16.2291 -8.22 0.00000724663 353 11 2 17 [+] picture button
zgc:153892 ENSDART00000059035 hypothetical protein LOC777708 [Source:RefSeq_peptide;Acc:NP_001071224]
16.9193 -12.38 0.00000747886 829 5 1 7 [+] picture button
si:dkey-164k19.1 ENSDART00000006423 Novel protein similar to vertebrate mannosidase, alpha, class 1A, member 1 (MAN1A1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RHM7]
16.779 -13.57 0.0000076274 700 4 1 4 [+] picture button
NP_001017370.1 ENSDART00000055677 similar to RIKEN cDNA 8030451K01 (LOC387921), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001012754]
18.1495 -20.49 0.00000772465 700 6 2 5 [+] picture button
pqlc3 ENSDART00000076410 PQ loop repeat containing 3 [Source:RefSeq_peptide;Acc:NP_001004615]
17.1735 -16.19 0.00000844531 578 10 1 19 [+] picture button
zgc:65956 ENSDART00000012938 phosphoglycerate dehydrogenase [Source:RefSeq_peptide;Acc:NP_955871]
16.487 -12.68 0.00000901036 260 6 6 17 [+] picture button
ctsh ENSDART00000060245 cathepsin H [Source:RefSeq_peptide;Acc:NP_997853]
17.4971 -13.87 0.0000109108 302 10 2 19 [+] picture button
A2BHH5_DANRE ENSDART00000082577 Novel protein. [Source:Uniprot/SPTREMBL;Acc:A2BHH5]
16.3562 -13.96 0.0000131029 700 6 1 7 [+] picture button
ATRN ENSDART00000089533 Attractin precursor (Mahogany homolog) (DPPT-L). [Source:Uniprot/SWISSPROT;Acc:O75882]
17.7392 -16.32 0.000014934 700 7 2 7 [+] picture button
acat2 ENSDART00000006778 acetyl-CoA acetyltransferase 2 [Source:RefSeq_peptide;Acc:NP_571445]
17.0784 -15.26 0.0000171799 673 12 1 17 [+] picture button
zgc:158350 ENSDART00000101535 hypothetical protein LOC569582 [Source:RefSeq_peptide;Acc:NP_001074462]
17.5288 -16.31 0.0000190952 700 6 9 9 [+] picture button
zgc:153688 ENSDART00000092116 hypothetical protein LOC558373 [Source:RefSeq_peptide;Acc:NP_001070029]
16.6384 -7.82 0.0000207114 444 10 1 19 [+] picture button
LOC799360 ENSDART00000064826 Putative helicase MOV-10 (EC 3.6.1.-) (Moloney leukemia virus 10 protein). [Source:Uniprot/SWISSPROT;Acc:Q9HCE1]Putative helicase MOV-10 (EC 3.6.1.-) (Moloney leukemia virus 10 protein). [Source:Uniprot/SWISSPROT;Acc:Q9HCE1] BY ORTHOLOGY TO:ENSMMUT00000021988
16.2827 -16.58 0.0000210355 700 6 2 7 [+] picture button
LOC555552 ENSDART00000003097 ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028]ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028] BY ORTHOLOGY TO:SINFRUT00000156198
16.6976 -16.87 0.0000212328 700 7 1 5 [+] picture button
zgc:110022 ENSDART00000065488 hypothetical protein LOC554131 [Source:RefSeq_peptide;Acc:NP_001019597]
16.5017 -11.83 0.0000214357 532 8 1 12 [+] picture button
C1orf184 ENSDART00000061596 UPF0351 protein C1orf184. [Source:Uniprot/SWISSPROT;Acc:Q5VVY1]
17.029 -9.15 0.0000307281 700 3 3 3 [+] picture button
znf593 ENSDART00000082237 zinc finger protein 593 [Source:RefSeq_peptide;Acc:NP_957111]
17.0087 -21.16 0.0000307818 700 6 1 7 [+] picture button
zgc:152969 ENSDART00000015103 hypothetical protein LOC777758 [Source:RefSeq_peptide;Acc:NP_001071267]
18.5336 -12.8 0.000031728 208 7 3 11 [+] picture button
Q6NSN0_DANRE ENSDART00000020434 LOC553209 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6NSN0]
16.2938 -16.83 0.0000382835 1412 5 1 5 [+] picture button
zgc:110460 ENSDART00000065317 Eukaryotic translation initiation factor 2A (eIF-2A). [Source:Uniprot/SWISSPROT;Acc:Q4QRJ7]
16.516 -8.72 0.0000389857 700 4 2 4 [+] picture button
pxk ENSDART00000092104 PX domain containing serine/threonine kinase [Source:RefSeq_peptide;Acc:NP_001076277]
16.4283 -14.14 0.0000420202 700 5 2 6 [+] picture button
LOC100006679 ENSDART00000101479 Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen). [Source:Uniprot/SWISSPROT;Acc:Q9NXZ2]Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen). [Source:Uniprot/SWISSPROT;Acc:Q9NXZ2] BY ORTHOLOGY TO:ENSBTAT00000029077
17.4785 -17.78 0.0000434793 700 8 1 11 [+] picture button
si:rp71-1p14.5 ENSDART00000065556 Novel protein similar to humna DNA-directed polymerase theta (POLQ) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6ZM94]
16.3864 -13.79 0.0000490433 700 4 1 6 [+] picture button
clic1 ENSDART00000081810 chloride intracellular channel 1 (clic1), mRNA [Source:RefSeq_dna;Acc:NM_212682]
16.5098 -15.68 0.00004995 700 8 1 10 [+] picture button
zgc:103502 ENSDART00000037455 hypothetical protein LOC449996 [Source:RefSeq_peptide;Acc:NP_001006017]
16.8281 -16.38 0.0000554827 258 6 4 6 [+] picture button
taf5l ENSDART00000032552 TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:RefSeq_peptide;Acc:NP_956146]
17.5103 -10.82 0.0000563712 105 3 4 7 [+] picture button
eef2k ENSDART00000052001 elongation factor-2 kinase [Source:RefSeq_peptide;Acc:NP_001002740]
16.5596 -12.31 0.0000569514 574 7 2 10 [+] picture button
LOC100003487 ENSDART00000105251 F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3]F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3] BY ORTHOLOGY TO:ENST00000313833
16.3144 -14.1 0.0000621105 700 6 1 6 [+] picture button
chn1 ENSDART00000103117 chimerin (chimaerin) 1 (chn1), mRNA [Source:RefSeq_dna;Acc:NM_213000]
16.7215 -17.62 0.0000621291 700 6 2 6 [+] picture button
ccnf ENSDART00000043144 cyclin F [Source:RefSeq_peptide;Acc:NP_996931]
16.4135 -12.31 0.0000631571 1001 7 1 9 [+] picture button

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Download table: GFF TXT
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