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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-30d

713 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ppargc1b ENSDART00000079080 Novel protein similar to human PGC-1-related estrogen receptor alpha coactivator (PERC) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q800H3]
15.957 -13.24 0.00000000686984 700 4 14 5 [+] picture button
melk ENSDART00000047728 maternal embryonic leucine zipper kinase [Source:RefSeq_peptide;Acc:NP_996771]
17.508 -10.14 0.0000000331796 318 8 7 14 [+] picture button
NP_001029093.1 ENSDART00000076974 hypothetical protein LOC569945 [Source:RefSeq_peptide;Acc:NP_001029093]
17.6427 -18.94 0.000000052207 700 6 2 7 [+] picture button
sox3 ENSDART00000075617 Transcription factor Sox-3. [Source:Uniprot/SWISSPROT;Acc:Q6EJB7]
17.0087 -13.19 0.000000069473 700 7 4 7 [+] picture button
DAGLA ENSDART00000091567 Sn1-specific diacylglycerol lipase alpha (EC 3.1.1.-) (DGL-alpha) (Neural stem cell-derived dendrite regulator). [Source:Uniprot/SWISSPROT;Acc:Q9Y4D2]
16.5551 -16.99 0.000000145802 700 7 6 8 [+] picture button
dll4 ENSDART00000103320 delta-like 4 [Source:RefSeq_peptide;Acc:NP_001073304]
17.5641 -15.85 0.000000161718 695 9 2 10 [+] picture button
LOC572113 ENSDART00000013257 hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377]hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377] BY ORTHOLOGY TO:ENSBTAT00000009388
16.4847 -11.84 0.000000216726 700 3 14 7 [+] picture button
rmi1 ENSDART00000060657 RMI1, RecQ mediated genome instability 1, homolog [Source:RefSeq_peptide;Acc:NP_956474]
16.7144 -11.1 0.000000223826 266 9 2 17 [+] picture button
pdss1 ENSDART00000040865 hypothetical protein LOC550349 [Source:RefSeq_peptide;Acc:NP_001017656]
16.0861 -8.13 0.00000023765 351 7 7 11 [+] picture button
atp6v1c1 ENSDART00000032275 Vacuolar ATP synthase subunit C 1-A (EC 3.6.3.14) (V-ATPase subunit C 1-A) (Vacuolar proton pump subunit C 1-A). [Source:Uniprot/SWISSPROT;Acc:Q7T385]
16.481 -16.72 0.000000264772 533 6 1 10 [+] picture button
zgc:92136 ENSDART00000034054 Nogo-B receptor precursor (NgBR) (Nuclear undecaprenyl pyrophosphate synthase 1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6DHR8]
17.0362 -12.58 0.000000824341 303 7 1 10 [+] picture button
nkx2.2a ENSDART00000081396 Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:Q90481]
16.1172 -13.62 0.00000086377 603 6 11 8 [+] picture button
ROBO1 ENSDART00000097132 Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U twenty twenty). [Source:Uniprot/SWISSPROT;Acc:Q9Y6N7]
17.0087 -24.4 0.000001 700 10 1 8 [+] picture button
Q1LY86_DANRE ENSDART00000092695 Novel protein similar to vertebrate junctional adhesion molecule 3 (JAM3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY86]
16.3864 -12.14 0.000001 700 12 1 5 [+] picture button
zgc:112011 ENSDART00000079928 hypothetical protein LOC553668 [Source:RefSeq_peptide;Acc:NP_001018477]
16.2587 -16.33 0.00000128746 813 7 1 9 [+] picture button
fvt1 ENSDART00000022621 3-ketodihydrosphingosine reductase [Source:RefSeq_peptide;Acc:NP_957433]
17.068 -17.62 0.00000251831 853 7 2 8 [+] picture button
zgc:86709 ENSDART00000080664 hypothetical protein LOC415156 [Source:RefSeq_peptide;Acc:NP_001002066]
18.3062 -14.96 0.00000270185 222 6 10 10 [+] picture button
zgc:101592 ENSDART00000073671 hypothetical protein LOC492769 [Source:RefSeq_peptide;Acc:NP_001007411]
15.9185 -7.9 0.00000370632 291 9 1 15 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.1692 -12.18 0.00000463301 276 10 3 15 [+] picture button
zgc:153892 ENSDART00000059035 hypothetical protein LOC777708 [Source:RefSeq_peptide;Acc:NP_001071224]
16.4097 -11.61 0.00000747886 829 5 1 7 [+] picture button
si:dkey-164k19.1 ENSDART00000006423 Novel protein similar to vertebrate mannosidase, alpha, class 1A, member 1 (MAN1A1) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5RHM7]
15.9453 -12.51 0.0000076274 700 4 1 4 [+] picture button
NP_001017370.1 ENSDART00000055677 similar to RIKEN cDNA 8030451K01 (LOC387921), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001012754]
16.4901 -18.3 0.00000772465 700 6 2 5 [+] picture button
skiv2l ENSDART00000089609 hypothetical protein LOC559653 [Source:RefSeq_peptide;Acc:NP_001038366]
16.4085 -15.13 0.00000866138 700 9 1 9 [+] picture button
zgc:65956 ENSDART00000012938 phosphoglycerate dehydrogenase [Source:RefSeq_peptide;Acc:NP_955871]
16.7144 -13.84 0.00000901036 260 6 6 17 [+] picture button
zgc:91935 ENSDART00000067057 hypothetical protein LOC445117 [Source:RefSeq_peptide;Acc:NP_001003511]
15.8677 -12.72 0.0000100888 350 6 2 10 [+] picture button
gtf2e2 ENSDART00000016488 general transcription factor IIE, polypeptide 2, beta [Source:RefSeq_peptide;Acc:NP_997896]
15.9185 -13.67 0.0000106269 269 9 2 13 [+] picture button
ctsh ENSDART00000060245 cathepsin H [Source:RefSeq_peptide;Acc:NP_997853]
17.4971 -13.17 0.0000109108 302 10 2 19 [+] picture button
LOC797613 ENSDART00000022288 Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3]Ribonucleoprotein PTB-binding 2 (Protein raver-2). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ3] BY ORTHOLOGY TO:ENSMODT00000001519
16.0321 -18.78 0.0000109275 700 10 3 11 [+] picture button
ATRN ENSDART00000089533 Attractin precursor (Mahogany homolog) (DPPT-L). [Source:Uniprot/SWISSPROT;Acc:O75882]
17.2175 -15.34 0.000014934 700 7 2 7 [+] picture button
acat2 ENSDART00000006778 acetyl-CoA acetyltransferase 2 [Source:RefSeq_peptide;Acc:NP_571445]
16.2453 -15.26 0.0000171799 673 12 1 17 [+] picture button
zgc:158350 ENSDART00000101535 hypothetical protein LOC569582 [Source:RefSeq_peptide;Acc:NP_001074462]
16.2692 -16.28 0.0000190952 700 6 9 9 [+] picture button
zgc:153688 ENSDART00000092116 hypothetical protein LOC558373 [Source:RefSeq_peptide;Acc:NP_001070029]
16.0838 -8.88 0.0000207114 444 10 1 19 [+] picture button
zgc:136380 ENSDART00000101253 hypothetical protein LOC563852 [Source:RefSeq_peptide;Acc:NP_001074060]
16.3197 -14.1 0.0000211329 552 4 4 6 [+] picture button
LOC555552 ENSDART00000003097 ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028]ras homolog gene family, member U [Source:RefSeq_peptide;Acc:NP_067028] BY ORTHOLOGY TO:SINFRUT00000156198
16.3864 -16.92 0.0000212328 700 7 1 5 [+] picture button
zgc:110022 ENSDART00000065488 hypothetical protein LOC554131 [Source:RefSeq_peptide;Acc:NP_001019597]
16.1717 -11 0.0000214357 532 8 1 12 [+] picture button
zgc:101686 ENSDART00000012600 hypothetical protein LOC492791 [Source:RefSeq_peptide;Acc:NP_001007433]
15.9473 -9.03 0.0000217583 404 9 2 11 [+] picture button
clrn1 ENSDART00000062909 clarin 1 [Source:RefSeq_peptide;Acc:NP_001002671]
16.0074 -16.72 0.0000269034 577 10 3 13 [+] picture button
LOC559073 ENSDART00000087372 Polypeptide N-acetylgalactosaminyltransferase 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains: Polypeptid [Source:Uniprot/SWISSPROT;Acc:Q10472]Polypeptide N-acetylgalactosaminyltransferase 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains: Polypeptid [Source:Uniprot/SWISSPROT;Acc:Q10472] BY ORTHOLOGY TO:ENSPTRT00000018303
16.5213 -15.37 0.000028038 700 5 6 5 [+] picture button
C1orf184 ENSDART00000061596 UPF0351 protein C1orf184. [Source:Uniprot/SWISSPROT;Acc:Q5VVY1]
16.5098 -8.71 0.0000307281 700 3 3 3 [+] picture button
zgc:152969 ENSDART00000015103 hypothetical protein LOC777758 [Source:RefSeq_peptide;Acc:NP_001071267]
17.624 -10.03 0.000031728 208 7 3 11 [+] picture button
zgc:100846 ENSDART00000015127 hypothetical protein LOC402895 [Source:RefSeq_peptide;Acc:NP_991166]
16.1494 -15.02 0.0000331378 769 8 1 10 [+] picture button
clic1 ENSDART00000081810 chloride intracellular channel 1 (clic1), mRNA [Source:RefSeq_dna;Acc:NM_212682]
15.9906 -15.74 0.00004995 700 8 1 10 [+] picture button
zgc:103502 ENSDART00000037455 hypothetical protein LOC449996 [Source:RefSeq_peptide;Acc:NP_001006017]
16.6007 -13.88 0.0000554827 258 6 4 6 [+] picture button
taf5l ENSDART00000032552 TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:RefSeq_peptide;Acc:NP_956146]
16.487 -8.62 0.0000563712 105 3 4 7 [+] picture button
eef2k ENSDART00000052001 elongation factor-2 kinase [Source:RefSeq_peptide;Acc:NP_001002740]
16.2391 -12.31 0.0000569514 574 7 2 10 [+] picture button
zgc:153687 ENSDART00000092323 hypothetical protein LOC768152 [Source:RefSeq_peptide;Acc:NP_001070763]
16.1459 -7.61 0.0000586233 135 2 4 2 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
16.0749 -13.09 0.000061173 524 7 4 15 [+] picture button
LOC100003487 ENSDART00000105251 F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3]F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3] BY ORTHOLOGY TO:ENST00000313833
16.1066 -14.19 0.0000621105 700 6 1 6 [+] picture button
zgc:112219 ENSDART00000066783 hypothetical protein LOC550396 [Source:RefSeq_peptide;Acc:NP_001017701]
15.9147 -16.42 0.000064072 639 8 1 10 [+] picture button
pitrm1 ENSDART00000056294 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (Pitrilysin metalloproteinase 1). [Source:Uniprot/SWISSPROT;Acc:Q7ZVZ6]
17.0555 -14.58 0.0000651271 168 4 2 6 [+] picture button

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Download table: GFF TXT
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