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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Danio rerio and dre-miR-30c

748 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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zgc:153972 ENSDART00000086437 hypothetical protein LOC563581 [Source:RefSeq_peptide;Acc:NP_001073477]
17.1148 -21.67 0.00000000625363 868 11 10 10 [+] picture button
melk ENSDART00000047728 maternal embryonic leucine zipper kinase [Source:RefSeq_peptide;Acc:NP_996771]
17.621 -9.96 0.0000000331796 318 8 7 14 [+] picture button
NP_001029093.1 ENSDART00000076974 hypothetical protein LOC569945 [Source:RefSeq_peptide;Acc:NP_001029093]
16.8025 -16.4 0.000000052207 700 6 2 7 [+] picture button
NP_998712.1 ENSDART00000049007 chondroitin 4-sulfotransferase-2 [Source:RefSeq_peptide;Acc:NP_998712]
15.9716 -10.98 0.000000093453 700 6 4 7 [+] picture button
LOC572113 ENSDART00000013257 hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377]hypothetical protein LOC535219 [Source:RefSeq_peptide;Acc:NP_001070377] BY ORTHOLOGY TO:ENSBTAT00000009388
17.2197 -12.05 0.000000216726 700 3 14 7 [+] picture button
rmi1 ENSDART00000060657 RMI1, RecQ mediated genome instability 1, homolog [Source:RefSeq_peptide;Acc:NP_956474]
16.7144 -13.44 0.000000223826 266 9 2 17 [+] picture button
atp6v1c1 ENSDART00000032275 Vacuolar ATP synthase subunit C 1-A (EC 3.6.3.14) (V-ATPase subunit C 1-A) (Vacuolar proton pump subunit C 1-A). [Source:Uniprot/SWISSPROT;Acc:Q7T385]
16.481 -12.75 0.000000264772 533 6 1 10 [+] picture button
zgc:92136 ENSDART00000034054 Nogo-B receptor precursor (NgBR) (Nuclear undecaprenyl pyrophosphate synthase 1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q6DHR8]
17.0362 -9.26 0.000000824341 303 7 1 10 [+] picture button
nkx2.2a ENSDART00000081396 Homeobox protein Nkx-2.2a (Homeobox protein NK-2 homolog B). [Source:Uniprot/SWISSPROT;Acc:Q90481]
17.3813 -16.68 0.00000086377 603 6 11 8 [+] picture button
ROBO1 ENSDART00000097132 Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U twenty twenty). [Source:Uniprot/SWISSPROT;Acc:Q9Y6N7]
16.2827 -13.52 0.000001 700 10 1 8 [+] picture button
Q1LY86_DANRE ENSDART00000092695 Novel protein similar to vertebrate junctional adhesion molecule 3 (JAM3) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1LY86]
16.179 -13.24 0.000001 700 12 1 5 [+] picture button
zgc:112011 ENSDART00000079928 hypothetical protein LOC553668 [Source:RefSeq_peptide;Acc:NP_001018477]
17.179 -19.36 0.00000128746 813 7 1 9 [+] picture button
PLAC8L1 ENSDART00000100106 PLAC8-like 1 [Source:RefSeq_peptide;Acc:NP_001025040]
16.3169 -19.41 0.00000151784 700 8 2 8 [+] picture button
zgc:86709 ENSDART00000080664 hypothetical protein LOC415156 [Source:RefSeq_peptide;Acc:NP_001002066]
18.3062 -11.74 0.00000270185 222 6 10 10 [+] picture button
XR_029166.1 ENSDART00000058789 hypothetical LOC566323 (LOC566323), mRNA [Source:RefSeq_dna;Acc:XR_029166]
16.2253 -14.11 0.00000365084 700 7 2 8 [+] picture button
ung ENSDART00000062359 uracil-DNA glycosylase [Source:RefSeq_peptide;Acc:NP_957268]
17.0555 -10.46 0.00000463301 276 10 3 15 [+] picture button
zgc:92375 ENSDART00000010496 hypothetical protein LOC445475 [Source:RefSeq_peptide;Acc:NP_001004112]
16.2596 -11.32 0.00000480027 276 6 3 9 [+] picture button
XR_029840.1 ENSDART00000092180 hypothetical LOC568029 (LOC568029), mRNA [Source:RefSeq_dna;Acc:XR_029840]
16.179 -9.36 0.00000506321 700 4 1 6 [+] picture button
ADAMTS1 ENSDART00000060939 ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and metalloproteinase with thrombospondin motifs 1) (ADAM-TS 1) (ADAM-TS1) (METH-1). [Source:Uniprot/SWISSPROT;Acc:Q9UHI8]
16.4901 -17.5 0.00000626994 700 10 3 14 [+] picture button
zgc:162306 ENSDART00000093074 hypothetical protein LOC572367 [Source:RefSeq_peptide;Acc:NP_001076348]
16.3864 -13.74 0.00000687816 700 10 3 9 [+] picture button
ppapdc1b ENSDART00000064603 phosphatidic acid phosphatase type 2 domain containing 1B [Source:RefSeq_peptide;Acc:NP_001002211]
17.6841 -10.89 0.00000724663 353 11 2 17 [+] picture button
NP_001017370.1 ENSDART00000055677 similar to RIKEN cDNA 8030451K01 (LOC387921), transcript variant 1, mRNA [Source:RefSeq_dna;Acc:NM_001012754]
17.4235 -16.58 0.00000772465 700 6 2 5 [+] picture button
zgc:65956 ENSDART00000012938 phosphoglycerate dehydrogenase [Source:RefSeq_peptide;Acc:NP_955871]
16.2596 -10.23 0.00000901036 260 6 6 17 [+] picture button
zgc:91935 ENSDART00000067057 hypothetical protein LOC445117 [Source:RefSeq_peptide;Acc:NP_001003511]
16.0912 -9.98 0.0000100888 350 6 2 10 [+] picture button
gtf2e2 ENSDART00000016488 general transcription factor IIE, polypeptide 2, beta [Source:RefSeq_peptide;Acc:NP_997896]
16.7144 -13.54 0.0000106269 269 9 2 13 [+] picture button
ctsh ENSDART00000060245 cathepsin H [Source:RefSeq_peptide;Acc:NP_997853]
17.2698 -16.04 0.0000109108 302 10 2 19 [+] picture button
XR_029782.1 ENSDART00000081730 similar to DNA polymerase zeta catalytic subunit (LOC569100), mRNA [Source:RefSeq_dna;Acc:XR_029782]
16.1017 -11.34 0.0000115958 700 5 4 8 [+] picture button
TACC2 ENSDART00000101654 Transforming acidic coiled-coil-containing protein 2 (Anti Zuai-1) (AZU-1). [Source:Uniprot/SWISSPROT;Acc:O95359]
16.1537 -16.01 0.000013238 700 8 4 11 [+] picture button
zgc:63471 ENSDART00000073735 Ras-related associated with diabetes [Source:RefSeq_peptide;Acc:NP_956092]
16.0885 -12.12 0.0000135634 739 10 2 10 [+] picture button
ATRN ENSDART00000089533 Attractin precursor (Mahogany homolog) (DPPT-L). [Source:Uniprot/SWISSPROT;Acc:O75882]
16.0697 -16.88 0.000014934 700 7 2 7 [+] picture button
acat2 ENSDART00000006778 acetyl-CoA acetyltransferase 2 [Source:RefSeq_peptide;Acc:NP_571445]
16.5577 -11.09 0.0000171799 673 12 1 17 [+] picture button
zgc:65779 ENSDART00000039055 RING finger protein 170. [Source:Uniprot/SWISSPROT;Acc:Q7SZN2]
16.5576 -14.97 0.0000182798 700 8 1 9 [+] picture button
zgc:158350 ENSDART00000101535 hypothetical protein LOC569582 [Source:RefSeq_peptide;Acc:NP_001074462]
16.4791 -12.99 0.0000190952 700 6 9 9 [+] picture button
LOC100003595 ENSDART00000022768 adenylate kinase 5 [Source:MarkerSymbol;Acc:MGI:2677491]adenylate kinase 5 [Source:MarkerSymbol;Acc:MGI:2677491] BY ORTHOLOGY TO:ENSMUST00000090875
17.1852 -18.56 0.0000193445 700 5 1 9 [+] picture button
zgc:153688 ENSDART00000092116 hypothetical protein LOC558373 [Source:RefSeq_peptide;Acc:NP_001070029]
16.0838 -7.47 0.0000207114 444 10 1 19 [+] picture button
zgc:136380 ENSDART00000101253 hypothetical protein LOC563852 [Source:RefSeq_peptide;Acc:NP_001074060]
16.213 -13.27 0.0000211329 552 4 4 6 [+] picture button
zgc:110022 ENSDART00000065488 hypothetical protein LOC554131 [Source:RefSeq_peptide;Acc:NP_001019597]
16.1717 -9.59 0.0000214357 532 8 1 12 [+] picture button
zgc:158219 ENSDART00000086018 hypothetical protein LOC563650 [Source:RefSeq_peptide;Acc:NP_001075043]
15.9545 -11.23 0.0000228101 517 6 6 9 [+] picture button
LOC559073 ENSDART00000087372 Polypeptide N-acetylgalactosaminyltransferase 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains: Polypeptid [Source:Uniprot/SWISSPROT;Acc:Q10472]Polypeptide N-acetylgalactosaminyltransferase 1 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 1) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 1) (Polypeptide GalNAc transferase 1) (GalNAc-T1) (pp-GaNTase 1) [Contains: Polypeptid [Source:Uniprot/SWISSPROT;Acc:Q10472] BY ORTHOLOGY TO:ENSPTRT00000018303
16.1031 -12.79 0.000028038 700 5 6 5 [+] picture button
Q1RLZ1_DANRE ENSDART00000056844 Ssfa2 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q1RLZ1]
16.2017 -19.26 0.0000297787 926 3 2 3 [+] picture button
zgc:152969 ENSDART00000015103 hypothetical protein LOC777758 [Source:RefSeq_peptide;Acc:NP_001071267]
16.487 -8.27 0.000031728 208 7 3 11 [+] picture button
zgc:100846 ENSDART00000015127 hypothetical protein LOC402895 [Source:RefSeq_peptide;Acc:NP_991166]
16.5608 -14.23 0.0000331378 769 8 1 10 [+] picture button
LOC570106 ENSDART00000085284 phosphofructokinase, liver, B-type [Source:MarkerSymbol;Acc:MGI:97547]phosphofructokinase, liver, B-type [Source:MarkerSymbol;Acc:MGI:97547] BY ORTHOLOGY TO:ENSMUST00000020522
16.4901 -11.29 0.0000445429 700 6 1 6 [+] picture button
IFT74 ENSDART00000025183 Intraflagellar transport 74 homolog (Coiled-coil domain-containing protein 2) (Capillary morphogenesis protein 1) (CMG-1). [Source:Uniprot/SWISSPROT;Acc:Q96LB3]
17.8844 -23.66 0.000050105 700 8 1 10 [+] picture button
zgc:103502 ENSDART00000037455 hypothetical protein LOC449996 [Source:RefSeq_peptide;Acc:NP_001006017]
16.487 -9.99 0.0000554827 258 6 4 6 [+] picture button
taf5l ENSDART00000032552 TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:RefSeq_peptide;Acc:NP_956146]
16.487 -7.21 0.0000563712 105 3 4 7 [+] picture button
mtnr1ar ENSDART00000054674 Melatonin receptor type 1A Z1.7 (MEL-1A-R) (Fragment). [Source:Uniprot/SWISSPROT;Acc:P51046]
16.0749 -10.72 0.000061173 524 7 4 15 [+] picture button
zgc:92408 ENSDART00000064176 hypothetical protein LOC431738 [Source:RefSeq_peptide;Acc:NP_001002191]
16.4037 -17.1 0.0000619451 543 12 3 20 [+] picture button
LOC100003487 ENSDART00000105251 F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3]F-box only protein 34. [Source:Uniprot/SWISSPROT;Acc:Q9NWN3] BY ORTHOLOGY TO:ENST00000313833
16.1066 -14.14 0.0000621105 700 6 1 6 [+] picture button
pitrm1 ENSDART00000056294 Presequence protease, mitochondrial precursor (EC 3.4.24.-) (Pitrilysin metalloproteinase 1). [Source:Uniprot/SWISSPROT;Acc:Q7ZVZ6]
16.487 -11.6 0.0000651271 168 4 2 6 [+] picture button

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Download table: GFF TXT
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